RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 ZNF850A8MQ14 1090 aa5.28□□□□□ -1.56
RTTN-209ENST00000583043 SIGLEC6O43699 453 aa5.28□□□□□ -1.56
RTTN-209ENST00000583043 PRH1P02810 166 aa5.28□□□□□ -1.56
RTTN-209ENST00000583043 DCNP07585 359 aaKnown RBP5.28□□□□□ -1.56
RTTN-209ENST00000583043 CT45A8P0DMV1 189 aa5.28□□□□□ -1.56
RTTN-209ENST00000583043 CT45A9P0DMV2 189 aa5.28□□□□□ -1.56
RTTN-209ENST00000583043 ARR3P36575 388 aa5.28□□□□□ -1.56
RTTN-209ENST00000583043 VEGFCP49767 419 aa5.28□□□□□ -1.56
RTTN-209ENST00000583043 RGS19P49795 217 aa5.28□□□□□ -1.56
RTTN-209ENST00000583043 OR1D5P58170 312 aa5.28□□□□□ -1.56
RTTN-209ENST00000583043 RAB35Q15286 201 aa5.28□□□□□ -1.56
RTTN-209ENST00000583043 C2orf76Q3KRA6 126 aa5.28□□□□□ -1.56
RTTN-209ENST00000583043 CT45A2Q5DJT8 189 aa5.28□□□□□ -1.56
RTTN-209ENST00000583043 C6orf183Q5T699 404 aa5.28□□□□□ -1.56
RTTN-209ENST00000583043 MEX3DQ86XN8 651 aaKnown RBP5.28□□□□□ -1.56
RTTN-209ENST00000583043 SPNS2Q8IVW8 549 aa5.28□□□□□ -1.56
RTTN-209ENST00000583043 TMEFF1Q8IYR6 380 aa5.28□□□□□ -1.56
RTTN-209ENST00000583043 OR10R2Q8NGX6 335 aa5.28□□□□□ -1.56
RTTN-209ENST00000583043 NINJ1Q92982 152 aa5.28□□□□□ -1.56
RTTN-209ENST00000583043 TSPAN32Q96QS1 320 aa5.28□□□□□ -1.56
RTTN-209ENST00000583043 RBM24Q9BX46 236 aaKnown RBP5.28□□□□□ -1.56
RTTN-209ENST00000583043 TSPAN10Q9H1Z9 355 aaPredicted RBP5.28□□□□□ -1.56
RTTN-209ENST00000583043 NECAP2Q9NVZ3 263 aa5.28□□□□□ -1.56
RTTN-209ENST00000583043 DNAJB11Q9UBS4 358 aa5.28□□□□□ -1.56
RTTN-209ENST00000583043 OR6C68A6NDL8 312 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 TRAPPC6AO75865 159 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 ZFPL1O95159 310 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 LCATP04180 440 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 ISG15P05161 165 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 CD46P15529 392 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 PTGER1P34995 402 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 NKX2-5P52952 324 aaPredicted RBP5.27□□□□□ -1.57
RTTN-209ENST00000583043 MGAT2Q10469 447 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 PEA15Q15121 130 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 GSG1Q2KHT4 349 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 PWWP2BQ6NUJ5 590 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 THSD4Q6ZMP0 1018 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 LYG2Q86SG7 212 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 OR4C3Q8NH37 302 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 TSSK2Q96PF2 358 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 SLC6A7Q99884 636 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 ZNF701Q9NV72 531 aaPredicted RBP5.27□□□□□ -1.57
RTTN-209ENST00000583043 LUZP4Q9P127 313 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 MLXQ9UH92 298 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 VDAC3Q9Y277 283 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 PCDHGA9Q9Y5G4 932 aaKnown RBP5.27□□□□□ -1.57
RTTN-209ENST00000583043 POMT1Q9Y6A1 747 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 KLRC4-KLRK1H3BQV0 150 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 DHHO43323 396 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 STK17BO94768 372 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 APLNRP35414 380 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 PER3P56645 1201 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 SPOCK1Q08629 439 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 SQSTM1Q13501 440 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 KLF9Q13886 244 aaPredicted RBP5.27□□□□□ -1.57
RTTN-209ENST00000583043 POU4F3Q15319 338 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 SHBQ15464 509 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 STK11Q15831 433 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 TMPPEQ6ZT21 453 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 MRPL21Q7Z2W9 205 aaKnown RBP5.27□□□□□ -1.57
RTTN-209ENST00000583043 ANKRD37Q7Z713 158 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 LGI3Q8N145 548 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 SEMA6DQ8NFY4 1073 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 TSNAXQ99598 290 aaKnown RBP5.27□□□□□ -1.57
RTTN-209ENST00000583043 VN1R1Q9GZP7 353 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 PBOV1Q9GZY1 135 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 SLC6A17Q9H1V8 727 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 B3GAT1Q9P2W7 334 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 DHCR7Q9UBM7 475 aaKnown RBP5.27□□□□□ -1.57
RTTN-209ENST00000583043 FAM171A2A8MVW0 826 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 PLA2G10O15496 165 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 GMFGO60234 142 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 HBE1P02100 147 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 S100A10P60903 97 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 RPP30P78346 268 aaKnown RBP5.27□□□□□ -1.57
RTTN-209ENST00000583043 ERV3-1Q14264 604 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 ODF4Q2M2E3 257 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 EXOSC6Q5RKV6 272 aaKnown RBP5.27□□□□□ -1.57
RTTN-209ENST00000583043 TMUB2Q71RG4 321 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 OLIG3Q7RTU3 272 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 SYT9Q86SS6 491 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 TMEM178AQ8NBL3 297 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 OR13C9Q8NGT0 318 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 CPT1CQ8TCG5 803 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 RNF133Q8WVZ7 376 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 MICU1Q9BPX6 476 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 TCEAL7Q9BRU2 100 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 ZNF442Q9H7R0 627 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 FRMPD3Q5JV73 1810 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 LINC01565O15544 149 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 SDC3O75056 442 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 MRPL33O75394 65 aaKnown RBP5.27□□□□□ -1.57
RTTN-209ENST00000583043 TK1P04183 234 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 CT62P0C5K7 136 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 RPA2P15927 270 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 CLDN15P56746 228 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 CLDN17P56750 224 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 TAGLNQ01995 201 aaKnown RBP5.27□□□□□ -1.57
RTTN-209ENST00000583043 DHODHQ02127 395 aa5.27□□□□□ -1.57
RTTN-209ENST00000583043 IL20RBQ6UXL0 311 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms