RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 PAIP2BQ9ULR5 123 aaKnown RBP16.1■□□□□ 0.17
SMPD3-211ENST00000568373 KNTC1P50748 2209 aa16.1■□□□□ 0.17
SMPD3-211ENST00000568373 DOCK10Q96BY6 2186 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 CCDC187A0A096LP49 1063 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 TPPPO94811 219 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 NR2C1P13056 603 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 SRD5A2P31213 254 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 PLA2G7Q13093 441 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 POU4F3Q15319 338 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 TOMM20Q15388 145 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 KCNMB1Q16558 191 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 FAM166AQ6J272 317 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 CREB3L2Q70SY1 520 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 PLPP7Q8NBV4 271 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 OR51D1Q8NGF3 324 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 OR2AJ1Q8NGZ0 328 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 C15orf40Q8WUR7 153 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 NAA11Q9BSU3 229 aaPredicted RBP16.09■□□□□ 0.17
SMPD3-211ENST00000568373 MOV10Q9HCE1 1003 aaKnown RBP16.09■□□□□ 0.17
SMPD3-211ENST00000568373 RBMX2Q9Y388 322 aaKnown RBP16.09■□□□□ 0.17
SMPD3-211ENST00000568373 LOC101059948A0A1B0GTJ6 334 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 GJE1A6NN92 205 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 KRT33AO76009 404 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 MT-CO3P00414 261 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 TMIGD3P0DMS9 266 aaPredicted RBP16.09■□□□□ 0.17
SMPD3-211ENST00000568373 RAB25P57735 213 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 TAS2R20P59543 309 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 EIF3IQ13347 325 aaKnown RBP16.09■□□□□ 0.17
SMPD3-211ENST00000568373 SNTB2Q13425 540 aaKnown RBP16.09■□□□□ 0.17
SMPD3-211ENST00000568373 ZFP69Q49AA0 526 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 GLT8D1Q68CQ7 371 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 RHOUQ7L0Q8 258 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 FCAMRQ8WWV6 532 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 NUDT15Q9NV35 164 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 COPZ2Q9P299 210 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 CDV3Q9UKY7 258 aaKnown RBP16.09■□□□□ 0.17
SMPD3-211ENST00000568373 N6AMT1Q9Y5N5 214 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 NUBP2Q9Y5Y2 271 aa16.09■□□□□ 0.17
SMPD3-211ENST00000568373 IGHV3-15A0A0B4J1V0 119 aa16.08■□□□□ 0.16
SMPD3-211ENST00000568373 A0A0J9YW62 118 aa16.08■□□□□ 0.16
SMPD3-211ENST00000568373 PRR33A8MZF0 331 aa16.08■□□□□ 0.16
SMPD3-211ENST00000568373 ZNF878C9JN71 531 aa16.08■□□□□ 0.16
SMPD3-211ENST00000568373 P2RY10O00398 339 aa16.08■□□□□ 0.16
SMPD3-211ENST00000568373 TTRP02766 147 aa16.08■□□□□ 0.16
SMPD3-211ENST00000568373 ACSM4P0C7M7 580 aa16.08■□□□□ 0.16
SMPD3-211ENST00000568373 ZNF806P0C7X5 589 aa16.08■□□□□ 0.16
SMPD3-211ENST00000568373 GIFP27352 417 aa16.08■□□□□ 0.16
SMPD3-211ENST00000568373 POU3F4P49335 361 aa16.08■□□□□ 0.16
SMPD3-211ENST00000568373 B3GALT5-AS1P59052 145 aa16.08■□□□□ 0.16
SMPD3-211ENST00000568373 BEST3Q8N1M1 668 aa16.08■□□□□ 0.16
SMPD3-211ENST00000568373 PSMF1Q92530 271 aa16.08■□□□□ 0.16
SMPD3-211ENST00000568373 FAM3DQ96BQ1 224 aa16.08■□□□□ 0.16
SMPD3-211ENST00000568373 UCN2Q96RP3 112 aa16.08■□□□□ 0.16
SMPD3-211ENST00000568373 CDC6Q99741 560 aa16.08■□□□□ 0.16
SMPD3-211ENST00000568373 EDEM2Q9BV94 578 aa16.08■□□□□ 0.16
SMPD3-211ENST00000568373 GPR87Q9BY21 358 aa16.08■□□□□ 0.16
SMPD3-211ENST00000568373 RANGRFQ9HD47 186 aaPredicted RBP16.08■□□□□ 0.16
SMPD3-211ENST00000568373 DDX28Q9NUL7 540 aaKnown RBP16.08■□□□□ 0.16
SMPD3-211ENST00000568373 GLTPQ9NZD2 209 aa16.08■□□□□ 0.16
SMPD3-211ENST00000568373 ASH2LQ9UBL3 628 aa16.08■□□□□ 0.16
SMPD3-211ENST00000568373 KIAA1549Q9HCM3 1950 aa16.08■□□□□ 0.16
SMPD3-211ENST00000568373 LOC100289279A0A1B0GTE1 492 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 MEGF11A6BM72 1044 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 NPIPA2E9PIF3 369 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 NPIPA3F8WFD2 350 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 TNFSF11O14788 317 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 XRCC3O43542 346 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 GALR2O43603 387 aaPredicted RBP16.07■□□□□ 0.16
SMPD3-211ENST00000568373 ECDO95905 644 aaPredicted RBP16.07■□□□□ 0.16
SMPD3-211ENST00000568373 TCRBP04435 133 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 CD37P11049 281 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 DLSTP36957 453 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 CYB561P49447 251 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 GABREP78334 506 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 ANKRD16Q6P6B7 361 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 ELMOD2Q8IZ81 293 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 OR9K2Q8NGE7 335 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 CACNG6Q9BXT2 260 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 PBOV1Q9GZY1 135 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 TRAV6A0A075B6T7 132 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 LRRC3CA6NJW4 275 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 C21orf140B9A014 251 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 ACOT7O00154 380 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 GLSO94925 669 aaPredicted RBP16.07■□□□□ 0.16
SMPD3-211ENST00000568373 MT-ND4P03905 459 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 CSNK1A1P48729 337 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 AP3S2P59780 193 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 PSMA6P60900 246 aaKnown RBP16.07■□□□□ 0.16
SMPD3-211ENST00000568373 CD83Q01151 205 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 C2orf76Q3KRA6 126 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 YRDCQ86U90 279 aaKnown RBP16.07■□□□□ 0.16
SMPD3-211ENST00000568373 OR51A2Q8NGJ7 313 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 OR14L1PQ8NHC6 308 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 DMRTB1Q96MA1 342 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 ZNF385AQ96PM9 386 aaKnown RBP16.07■□□□□ 0.16
SMPD3-211ENST00000568373 OR2M2Q96R28 347 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 NIPAL2Q9H841 368 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 TMEM9BQ9NQ34 198 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 RCE1Q9Y256 329 aa16.07■□□□□ 0.16
SMPD3-211ENST00000568373 DNPH1O43598 174 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms