RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 CCR9P51686 369 aa12.55□□□□□ -0.4
CNN2-204ENST00000562075 TDGF1P3P51864 188 aa12.55□□□□□ -0.4
CNN2-204ENST00000562075 PCBD1P61457 104 aa12.55□□□□□ -0.4
CNN2-204ENST00000562075 GRB2P62993 217 aaKnown RBP12.55□□□□□ -0.4
CNN2-204ENST00000562075 HIST1H3AP68431 136 aa12.55□□□□□ -0.4
CNN2-204ENST00000562075 SCRN3Q0VDG4 424 aa12.55□□□□□ -0.4
CNN2-204ENST00000562075 LSAMPQ13449 338 aa12.55□□□□□ -0.4
CNN2-204ENST00000562075 GUSBP1Q15486 140 aa12.55□□□□□ -0.4
CNN2-204ENST00000562075 NRN1LQ496H8 165 aa12.55□□□□□ -0.4
CNN2-204ENST00000562075 ACSM3Q53FZ2 586 aa12.55□□□□□ -0.4
CNN2-204ENST00000562075 YIF1BQ5BJH7 314 aa12.55□□□□□ -0.4
CNN2-204ENST00000562075 HIST2H3PS2Q5TEC6 136 aa12.55□□□□□ -0.4
CNN2-204ENST00000562075 FBXW9Q5XUX1 488 aa12.55□□□□□ -0.4
CNN2-204ENST00000562075 PAMR1Q6UXH9 720 aa12.55□□□□□ -0.4
CNN2-204ENST00000562075 HIST2H3AQ71DI3 136 aa12.55□□□□□ -0.4
CNN2-204ENST00000562075 RHOUQ7L0Q8 258 aa12.55□□□□□ -0.4
CNN2-204ENST00000562075 FAM214BQ7L5A3 538 aa12.55□□□□□ -0.4
CNN2-204ENST00000562075 SLC16A14Q7RTX9 510 aa12.55□□□□□ -0.4
CNN2-204ENST00000562075 CATSPERDQ86XM0 798 aa12.55□□□□□ -0.4
CNN2-204ENST00000562075 CNEP1R1Q8N9A8 125 aa12.55□□□□□ -0.4
CNN2-204ENST00000562075 FBXO17Q96EF6 278 aa12.55□□□□□ -0.4
CNN2-204ENST00000562075 PRORYQ9H606 182 aa12.55□□□□□ -0.4
CNN2-204ENST00000562075 NIPAL2Q9H841 368 aa12.55□□□□□ -0.4
CNN2-204ENST00000562075 PNRC2Q9NPJ4 139 aaKnown RBP12.55□□□□□ -0.4
CNN2-204ENST00000562075 SNTG1Q9NSN8 517 aa12.55□□□□□ -0.4
CNN2-204ENST00000562075 CCDC59Q9P031 241 aaKnown RBP12.55□□□□□ -0.4
CNN2-204ENST00000562075 MALT1Q9UDY8 824 aa12.55□□□□□ -0.4
CNN2-204ENST00000562075 LOC400499M0QZD8 3231 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 ZFHX4Q86UP3 3567 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 PHF3Q92576 2039 aaKnown RBP12.54□□□□□ -0.4
CNN2-204ENST00000562075 TMEM269A0A1B0GVZ9 245 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 MBD3L4A6NDZ8 208 aaPredicted RBP12.54□□□□□ -0.4
CNN2-204ENST00000562075 MBD3L3A6NE82 208 aaPredicted RBP12.54□□□□□ -0.4
CNN2-204ENST00000562075 MBD3L5A6NJ08 208 aaPredicted RBP12.54□□□□□ -0.4
CNN2-204ENST00000562075 SGCEO43556 437 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 GATBO75879 557 aaKnown RBP12.54□□□□□ -0.4
CNN2-204ENST00000562075 PNPP00491 289 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 IL1AP01583 271 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 MYL9P24844 172 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 SOX6P35712 828 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 PER3P56645 1201 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 PSMA6P60900 246 aaKnown RBP12.54□□□□□ -0.4
CNN2-204ENST00000562075 RPS11P62280 158 aaKnown RBP eCLIP12.54□□□□□ -0.4
CNN2-204ENST00000562075 KLRB1Q12918 225 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 RAB35Q15286 201 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 ODF4Q2M2E3 257 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 CCDC92Q53HC0 331 aaPredicted RBP12.54□□□□□ -0.4
CNN2-204ENST00000562075 PRR30Q53SZ7 412 aaPredicted RBP12.54□□□□□ -0.4
CNN2-204ENST00000562075 ZMAT1Q5H9K5 638 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 ELFN2Q5R3F8 820 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 BCL2L15Q5TBC7 163 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 GFRALQ6UXV0 394 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 SYT9Q86SS6 491 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 IL17RDQ8NFM7 739 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 OR6K3Q8NGY3 331 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 MBD3L2Q8NHZ7 208 aaPredicted RBP12.54□□□□□ -0.4
CNN2-204ENST00000562075 RGP1Q92546 391 aaPredicted RBP12.54□□□□□ -0.4
CNN2-204ENST00000562075 SNRNP40Q96DI7 357 aaKnown RBP12.54□□□□□ -0.4
CNN2-204ENST00000562075 OR14A2Q96R54 314 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 ATF6BQ99941 703 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 SLX1AQ9BQ83 275 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 WACQ9BTA9 647 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 MED18Q9BUE0 208 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 BRD7Q9NPI1 651 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 DDX28Q9NUL7 540 aaKnown RBP12.54□□□□□ -0.4
CNN2-204ENST00000562075 PLEK2Q9NYT0 353 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 OR52A1Q9UKL2 312 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 SLC22A13Q9Y226 551 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 SLC5A6Q9Y289 635 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 NCOR2Q9Y618 2525 aa12.54□□□□□ -0.4
CNN2-204ENST00000562075 CFAP47Q6ZTR5 3102 aa12.53□□□□□ -0.4
CNN2-204ENST00000562075 DVL2O14641 736 aa12.53□□□□□ -0.4
CNN2-204ENST00000562075 CASKO14936 926 aa12.53□□□□□ -0.4
CNN2-204ENST00000562075 DOK2O60496 412 aa12.53□□□□□ -0.4
CNN2-204ENST00000562075 SC5DO75845 299 aa12.53□□□□□ -0.4
CNN2-204ENST00000562075 CLPXO76031 633 aa12.53□□□□□ -0.4
CNN2-204ENST00000562075 HOXD4P09016 255 aaPredicted RBP12.53□□□□□ -0.4
CNN2-204ENST00000562075 ZNF32P17041 273 aa12.53□□□□□ -0.4
CNN2-204ENST00000562075 CALRP27797 417 aaKnown RBP12.53□□□□□ -0.4
CNN2-204ENST00000562075 MPGP29372 298 aa12.53□□□□□ -0.4
CNN2-204ENST00000562075 SDC2P34741 201 aa12.53□□□□□ -0.4
CNN2-204ENST00000562075 RPS19P39019 145 aaKnown RBP12.53□□□□□ -0.4
CNN2-204ENST00000562075 KIR2DL2P43627 348 aaPredicted RBP12.53□□□□□ -0.4
CNN2-204ENST00000562075 CX3CR1P49238 355 aa12.53□□□□□ -0.4
CNN2-204ENST00000562075 MMP16P51512 607 aa12.53□□□□□ -0.4
CNN2-204ENST00000562075 PRKXP51817 358 aa12.53□□□□□ -0.4
CNN2-204ENST00000562075 FOXG1P55316 489 aaPredicted RBP12.53□□□□□ -0.4
CNN2-204ENST00000562075 MXD1Q05195 221 aa12.53□□□□□ -0.4
CNN2-204ENST00000562075 RTL6Q6ICC9 239 aa12.53□□□□□ -0.4
CNN2-204ENST00000562075 TFAP2EQ6VUC0 442 aa12.53□□□□□ -0.4
CNN2-204ENST00000562075 ZNF704Q6ZNC4 412 aaPredicted RBP12.53□□□□□ -0.4
CNN2-204ENST00000562075 SKA3Q8IX90 412 aa12.53□□□□□ -0.4
CNN2-204ENST00000562075 ZNF283Q8N7M2 679 aa12.53□□□□□ -0.4
CNN2-204ENST00000562075 KDF1Q8NAX2 398 aaPredicted RBP12.53□□□□□ -0.4
CNN2-204ENST00000562075 GPR148Q8TDV2 347 aa12.53□□□□□ -0.4
CNN2-204ENST00000562075 HDHD2Q9H0R4 259 aa12.53□□□□□ -0.4
CNN2-204ENST00000562075 SLC25A18Q9H1K4 315 aa12.53□□□□□ -0.4
CNN2-204ENST00000562075 MOB1AQ9H8S9 216 aa12.53□□□□□ -0.4
CNN2-204ENST00000562075 RNF121Q9H920 327 aa12.53□□□□□ -0.4
CNN2-204ENST00000562075 ASF1BQ9NVP2 202 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms