RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 TTC23Q5W5X9 447 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 LIN54Q6MZP7 749 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 ANKRD16Q6P6B7 361 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 B3GNT6Q6ZMB0 384 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 NCCRP1Q6ZVX7 275 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-212ENST00000554486 NUFIP2Q7Z417 695 aaKnown RBP5.53□□□□□ -1.52
SCFD1-212ENST00000554486 MCEMP1Q8IX19 187 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 TUSC5Q8IXB3 177 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 GCNT2Q8N0V5 402 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 TMEM123Q8N131 208 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 SLC37A3Q8NCC5 494 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 ZNF555Q8NEP9 628 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 OR52E2Q8NGJ4 325 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 OR4K13Q8NH42 304 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 OR6X1Q8NH79 312 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 FAM81AQ8TBF8 368 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 HDAC2Q92769 488 aaKnown RBP5.53□□□□□ -1.52
SCFD1-212ENST00000554486 TMEM45BQ96B21 275 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 GMPPAQ96IJ6 420 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-212ENST00000554486 MUS81Q96NY9 551 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 OR2M2Q96R28 347 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 TTYH2Q9BSA4 534 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 MRPL13Q9BYD1 178 aaKnown RBP5.53□□□□□ -1.52
SCFD1-212ENST00000554486 TP63Q9H3D4 680 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-212ENST00000554486 CMC2Q9NRP2 79 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 ZNF226Q9NYT6 803 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 TVP23BQ9NYZ1 205 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 SH3BGRL2Q9UJC5 107 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 GMPPBQ9Y5P6 360 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 CACNA1CQ13936 2221 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 PRR14LQ5THK1 2151 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 SPTBN1Q01082 2364 aaKnown RBP5.52□□□□□ -1.53
SCFD1-212ENST00000554486 RTTNQ86VV8 2226 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 FLNCQ14315 2725 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 IGKV1D-43A0A0B4J1Z2 117 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 SLC22A23A1A5C7 686 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 PRSS37A4D1T9 235 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 OR6C68A6NDL8 312 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 A6NIZ1 184 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 H7C1C5 153 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 GPR171O14626 319 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 ARHGEF9O43307 516 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 TNFSF13O75888 250 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 HMGN1P05114 100 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 YES1P07947 543 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 ITGA5P08648 1049 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 PGA4P0DJD7 388 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 PGA3P0DJD8 388 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 TMIGD3P0DMS9 266 aaPredicted RBP5.52□□□□□ -1.53
SCFD1-212ENST00000554486 GABRB1P18505 474 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 GNLYP22749 145 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 MYF6P23409 242 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 AGTR1P30556 359 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 SERPINF1P36955 418 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 CA7P43166 264 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 UQCRFS1P47985 274 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 DAP3P51398 398 aaKnown RBP5.52□□□□□ -1.53
SCFD1-212ENST00000554486 RAP1BP61224 184 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 ISL1P61371 349 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 LCN6P62502 163 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 RAP1AP62834 184 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 SIRPAP78324 504 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.52□□□□□ -1.53
SCFD1-212ENST00000554486 CD47Q08722 323 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 PMPCAQ10713 525 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 ITGADQ13349 1161 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 KEAP1Q14145 624 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 CRMP1Q14194 572 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 MAD2L1BPQ15013 274 aaPredicted RBP5.52□□□□□ -1.53
SCFD1-212ENST00000554486 SNAPC1Q16533 368 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 HIST3H3Q16695 136 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 PHYHD1Q5SRE7 291 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 RIPPLY2Q5TAB7 128 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 CARD17Q5XLA6 110 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 FAM205BPQ63HN1 556 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 OR2A2Q6IF42 318 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 LAIR2Q6ISS4 152 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 NIPAL3Q6P499 406 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 LEG1Q6P5S2 330 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 CASP12Q6UXS9 341 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 LINGO2Q7L985 606 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 AAED1Q7RTV5 226 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 BCDIN3DQ7Z5W3 292 aaKnown RBP5.52□□□□□ -1.53
SCFD1-212ENST00000554486 ADCK1Q86TW2 530 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 CPOQ8IVL8 374 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 C20orf196Q8IYI0 205 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 ENTHD1Q8IYW4 607 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 TCEANCQ8N8B7 351 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 SYT14Q8NB59 555 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 CYB561A3Q8NBI2 242 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 NAXEQ8NCW5 288 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 SDR9C7Q8NEX9 313 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 NOXO1Q8NFA2 376 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 RHOXF1Q8NHV9 184 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 ABHD5Q8WTS1 349 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 PTP4A1Q93096 173 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 TMEM54Q969K7 222 aa5.52□□□□□ -1.53
SCFD1-212ENST00000554486 INTS12Q96CB8 462 aaKnown RBP5.52□□□□□ -1.53
SCFD1-212ENST00000554486 SLC25A44Q96H78 314 aaPredicted RBP5.52□□□□□ -1.53
SCFD1-212ENST00000554486 TSSK2Q96PF2 358 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms