RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 DKK4Q9UBT3 224 aa17.23■□□□□ 0.35
RBFOX1-215ENST00000553186 CAMK2AQ9UQM7 478 aa17.23■□□□□ 0.35
RBFOX1-215ENST00000553186 LOC110117498-PIK3R3F6TDL0 507 aa17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 SRMP19623 302 aa17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 TNFSF8P32971 234 aa17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 CEP78Q5JTW2 689 aa17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 GPR148Q8TDV2 347 aa17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 PRDM14Q9GZV8 571 aa17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 PLSCR2Q9NRY7 297 aa17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 TMEM38BQ9NVV0 291 aa17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 CLEC4AQ9UMR7 237 aa17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 GTF2A1LQ9UNN4 478 aa17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 TNRC6AQ8NDV7 1962 aaKnown RBP17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 ANKRD11Q6UB99 2663 aaPredicted RBP17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 RGS5O15539 181 aa17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 TGM6O95932 706 aa17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 HIST1H3AP68431 136 aa17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 HIST2H3PS2Q5TEC6 136 aa17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 TSPO2Q5TGU0 170 aa17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 ZNF544Q6NX49 715 aa17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 HIST2H3AQ71DI3 136 aa17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 LAX1Q8IWV1 398 aa17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 LRRC18Q8N456 261 aa17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 SLCO5A1Q9H2Y9 848 aa17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 CALHM2Q9HA72 323 aa17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 GPR35Q9HC97 309 aa17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 B3GAT2Q9NPZ5 323 aa17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 PARPBPQ9NWS1 579 aa17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 OR52A1Q9UKL2 312 aa17.22■□□□□ 0.35
RBFOX1-215ENST00000553186 YES1P07947 543 aa17.21■□□□□ 0.35
RBFOX1-215ENST00000553186 NPR2P20594 1047 aa17.21■□□□□ 0.35
RBFOX1-215ENST00000553186 CFL1P23528 166 aaKnown RBP17.21■□□□□ 0.35
RBFOX1-215ENST00000553186 SOX2P48431 317 aa17.21■□□□□ 0.35
RBFOX1-215ENST00000553186 RBMXL3Q8N7X1 1067 aaKnown RBP17.21■□□□□ 0.35
RBFOX1-215ENST00000553186 FBXO17Q96EF6 278 aa17.21■□□□□ 0.35
RBFOX1-215ENST00000553186 WDFY2Q96P53 400 aa17.21■□□□□ 0.35
RBFOX1-215ENST00000553186 LINC00470Q9BZP3 86 aa17.21■□□□□ 0.35
RBFOX1-215ENST00000553186 MIXL1Q9H2W2 232 aa17.21■□□□□ 0.35
RBFOX1-215ENST00000553186 ABCB9Q9NP78 766 aa17.21■□□□□ 0.35
RBFOX1-215ENST00000553186 SPTBN4Q9H254 2564 aa17.21■□□□□ 0.35
RBFOX1-215ENST00000553186 TRBV5-7A0A0A0MS05 114 aa17.21■□□□□ 0.34
RBFOX1-215ENST00000553186 TAF4O00268 1085 aa17.21■□□□□ 0.34
RBFOX1-215ENST00000553186 AQP7O14520 342 aa17.21■□□□□ 0.34
RBFOX1-215ENST00000553186 RAB3BP20337 219 aa17.21■□□□□ 0.34
RBFOX1-215ENST00000553186 MAPK3P27361 379 aaPredicted RBP17.21■□□□□ 0.34
RBFOX1-215ENST00000553186 CEACAM16Q2WEN9 425 aa17.21■□□□□ 0.34
RBFOX1-215ENST00000553186 SFXN4Q6P4A7 337 aa17.21■□□□□ 0.34
RBFOX1-215ENST00000553186 ADGRE4PQ86SQ3 457 aa17.21■□□□□ 0.34
RBFOX1-215ENST00000553186 GJC3Q8NFK1 279 aa17.21■□□□□ 0.34
RBFOX1-215ENST00000553186 ZCCHC4Q9H5U6 513 aa17.21■□□□□ 0.34
RBFOX1-215ENST00000553186 PALMDQ9NP74 551 aa17.21■□□□□ 0.34
RBFOX1-215ENST00000553186 DDX28Q9NUL7 540 aaKnown RBP17.21■□□□□ 0.34
RBFOX1-215ENST00000553186 CMAHPQ9Y471 501 aa17.21■□□□□ 0.34
RBFOX1-215ENST00000553186 H3BSH0 61 aa17.2■□□□□ 0.34
RBFOX1-215ENST00000553186 K7ENP7 123 aa17.2■□□□□ 0.34
RBFOX1-215ENST00000553186 ISG15P05161 165 aa17.2■□□□□ 0.34
RBFOX1-215ENST00000553186 THBS2P35442 1172 aa17.2■□□□□ 0.34
RBFOX1-215ENST00000553186 ZNF45Q02386 682 aa17.2■□□□□ 0.34
RBFOX1-215ENST00000553186 INO80CQ6PI98 192 aaPredicted RBP17.2■□□□□ 0.34
RBFOX1-215ENST00000553186 CROCCP3Q8IVE0 287 aa17.2■□□□□ 0.34
RBFOX1-215ENST00000553186 PARP16Q8N5Y8 322 aa17.2■□□□□ 0.34
RBFOX1-215ENST00000553186 TMEM106AQ96A25 262 aa17.2■□□□□ 0.34
RBFOX1-215ENST00000553186 FOXB1Q99853 325 aa17.2■□□□□ 0.34
RBFOX1-215ENST00000553186 NIPAL2Q9H841 368 aa17.2■□□□□ 0.34
RBFOX1-215ENST00000553186 SLC7A10Q9NS82 523 aa17.2■□□□□ 0.34
RBFOX1-215ENST00000553186 ZNF175Q9Y473 711 aa17.2■□□□□ 0.34
RBFOX1-215ENST00000553186 NCOA6Q14686 2063 aaPredicted RBP17.2■□□□□ 0.34
RBFOX1-215ENST00000553186 SLC22A20A6NK97 555 aa17.19■□□□□ 0.34
RBFOX1-215ENST00000553186 IGHV3-9P01782 118 aa17.19■□□□□ 0.34
RBFOX1-215ENST00000553186 RAF1P04049 648 aa17.19■□□□□ 0.34
RBFOX1-215ENST00000553186 PPP5CP53041 499 aa17.19■□□□□ 0.34
RBFOX1-215ENST00000553186 PSMA6P60900 246 aaKnown RBP17.19■□□□□ 0.34
RBFOX1-215ENST00000553186 SLC25A35Q3KQZ1 300 aa17.19■□□□□ 0.34
RBFOX1-215ENST00000553186 KLHL24Q6TFL4 600 aa17.19■□□□□ 0.34
RBFOX1-215ENST00000553186 ARPC4-TTLL3A0A0A6YYG9 625 aa17.19■□□□□ 0.34
RBFOX1-215ENST00000553186 B4GALT1P15291 398 aa17.19■□□□□ 0.34
RBFOX1-215ENST00000553186 CTSSP25774 331 aa17.19■□□□□ 0.34
RBFOX1-215ENST00000553186 CCDC92Q53HC0 331 aaPredicted RBP17.19■□□□□ 0.34
RBFOX1-215ENST00000553186 IDNKQ5T6J7 187 aa17.19■□□□□ 0.34
RBFOX1-215ENST00000553186 DDI2Q5TDH0 399 aa17.19■□□□□ 0.34
RBFOX1-215ENST00000553186 GFI1Q99684 422 aa17.19■□□□□ 0.34
RBFOX1-215ENST00000553186 SLC30A2Q9BRI3 323 aa17.19■□□□□ 0.34
RBFOX1-215ENST00000553186 COMMD3Q9UBI1 195 aa17.19■□□□□ 0.34
RBFOX1-215ENST00000553186 MKRN2OSH3BPM6 223 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 ZNHIT1O43257 154 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 CD40LGP29965 261 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 SPANXN2Q5MJ10 180 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 C16orf87Q6PH81 154 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 ASB5Q8WWX0 329 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 CEP19Q96LK0 163 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 SLC25A18Q9H1K4 315 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 BRD7Q9NPI1 651 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 SLC5A6Q9Y289 635 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 AK6Q9Y3D8 172 aaKnown RBP17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 ANKRD61A6NGH8 418 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 NOTOA8MTQ0 251 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 RPL36A-HNRNPH2H7BZ11 118 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 DOK2O60496 412 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 TTRP02766 147 aa17.18■□□□□ 0.34
RBFOX1-215ENST00000553186 CST2P09228 141 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms