RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 DHFRP00374 187 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 MT-ND4P03905 459 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 SERPINA7P05543 415 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 AVPR2P30518 371 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 DNASE1L1P49184 302 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 POU3F4P49335 361 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 RRAS2P62070 204 aaPredicted RBP12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 RAC1P63000 192 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 C2orf76Q3KRA6 126 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 CDCP2Q5VXM1 449 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 CFAP77Q6ZQR2 320 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 OR2AJ1Q8NGZ0 328 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 SLC25A28Q96A46 364 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 FAM3DQ96BQ1 224 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 PIGQQ9BRB3 760 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 BEX2Q9BXY8 128 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 OR2B2Q9GZK3 357 aa12.45□□□□□ -0.42
RAB3IP-216ENST00000552199 WDFY3Q8IZQ1 3526 aa12.44□□□□□ -0.42
RAB3IP-216ENST00000552199 PCSK5Q92824 1860 aa12.44□□□□□ -0.42
RAB3IP-216ENST00000552199 TRAV6A0A075B6T7 132 aa12.44□□□□□ -0.42
RAB3IP-216ENST00000552199 LOC100289279A0A1B0GTE1 492 aa12.44□□□□□ -0.42
RAB3IP-216ENST00000552199 MEGF11A6BM72 1044 aa12.44□□□□□ -0.42
RAB3IP-216ENST00000552199 ACOT7O00154 380 aa12.44□□□□□ -0.42
RAB3IP-216ENST00000552199 VAMP5O95183 116 aa12.44□□□□□ -0.42
RAB3IP-216ENST00000552199 CCR6P51684 374 aa12.44□□□□□ -0.42
RAB3IP-216ENST00000552199 AP3S2P59780 193 aa12.44□□□□□ -0.42
RAB3IP-216ENST00000552199 CSNK2A1P68400 391 aaPredicted RBP12.44□□□□□ -0.42
RAB3IP-216ENST00000552199 ANKRD16Q6P6B7 361 aa12.44□□□□□ -0.42
RAB3IP-216ENST00000552199 DNM1P46Q6ZS02 220 aa12.44□□□□□ -0.42
RAB3IP-216ENST00000552199 CREB3L2Q70SY1 520 aa12.44□□□□□ -0.42
RAB3IP-216ENST00000552199 ELMOD2Q8IZ81 293 aa12.44□□□□□ -0.42
RAB3IP-216ENST00000552199 TCTE3Q8IZS6 198 aa12.44□□□□□ -0.42
RAB3IP-216ENST00000552199 PLPP7Q8NBV4 271 aa12.44□□□□□ -0.42
RAB3IP-216ENST00000552199 AKAP1Q92667 903 aaKnown RBP eCLIP12.44□□□□□ -0.42
RAB3IP-216ENST00000552199 HRASLSQ9HDD0 168 aa12.44□□□□□ -0.42
RAB3IP-216ENST00000552199 ZNF275Q9NSD4 429 aaPredicted RBP12.44□□□□□ -0.42
RAB3IP-216ENST00000552199 P4HTMQ9NXG6 502 aa12.44□□□□□ -0.42
RAB3IP-216ENST00000552199 MRPL15Q9P015 296 aaKnown RBP12.44□□□□□ -0.42
RAB3IP-216ENST00000552199 KLK11Q9UBX7 282 aa12.44□□□□□ -0.42
RAB3IP-216ENST00000552199 POLR1DQ9Y2S0 133 aa12.44□□□□□ -0.42
RAB3IP-216ENST00000552199 CFAP54Q96N23 3096 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 SDK2Q58EX2 2172 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 A0A0A6YYJ9 748 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 A0A0G2JMM0 328 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 A0A0J9YW62 118 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 A0A1W2PNU3 283 aaPredicted RBP12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 A0A1W2PPB8 328 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 A0A1W2PRS3 328 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 KIR3DP1A8MWS1 328 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 LMX1BO60663 402 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 CTAG2O75638 210 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 TTRP02766 147 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 ACSM4P0C7M7 580 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 SRD5A2P31213 254 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 EFNB2P52799 333 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 B3GALT5-AS1P59052 145 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 POU4F3Q15319 338 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 ACER2Q5QJU3 275 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 BTN2A1Q7KYR7 527 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 RHOUQ7L0Q8 258 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 ESX1Q8N693 406 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 SCMH1Q96GD3 660 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 PBOV1Q9GZY1 135 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 SLC17A5Q9NRA2 495 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 GLTPQ9NZD2 209 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 RCE1Q9Y256 329 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 R4GN57 208 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 ANKRD20A5PA0PJZ0 165 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 C7orf66A4D0T2 115 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 NAP1L6A6NFF2 107 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 ZNF878C9JN71 531 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 ATP6V1G1O75348 118 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 GSTT2BP0CG30 244 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 PTHLHP12272 177 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 NR2C1P13056 603 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 RAG2P55895 527 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 GABREP78334 506 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 TOMM20Q15388 145 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 NOXA1Q86UR1 476 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 OR51A2Q8NGJ7 313 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 TMEM54Q969K7 222 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 RNF170Q96K19 258 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 UCN2Q96RP3 112 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 GHITMQ9H3K2 345 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 NIPAL2Q9H841 368 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 DIABLOQ9NR28 239 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 MCUBQ9NWR8 336 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 FOXJ2Q9P0K8 574 aa12.43□□□□□ -0.42
RAB3IP-216ENST00000552199 KIAA1549Q9HCM3 1950 aa12.42□□□□□ -0.42
RAB3IP-216ENST00000552199 CCDC187A0A096LP49 1063 aa12.42□□□□□ -0.42
RAB3IP-216ENST00000552199 IGHV3-15A0A0B4J1V0 119 aa12.42□□□□□ -0.42
RAB3IP-216ENST00000552199 TMEM272A0A1B0GTI8 110 aa12.42□□□□□ -0.42
RAB3IP-216ENST00000552199 GGT3PA6NGU5 568 aa12.42□□□□□ -0.42
RAB3IP-216ENST00000552199 GJE1A6NN92 205 aa12.42□□□□□ -0.42
RAB3IP-216ENST00000552199 TNFSF11O14788 317 aa12.42□□□□□ -0.42
RAB3IP-216ENST00000552199 MT-CO3P00414 261 aa12.42□□□□□ -0.42
RAB3IP-216ENST00000552199 H2AFB2P0C5Z0 115 aa12.42□□□□□ -0.42
RAB3IP-216ENST00000552199 HTR2CP28335 458 aa12.42□□□□□ -0.42
RAB3IP-216ENST00000552199 CSNK1A1P48729 337 aa12.42□□□□□ -0.42
RAB3IP-216ENST00000552199 GLYATL3Q5SZD4 288 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms