RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 CCNE2O96020 404 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 IGHG4P01861 327 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 APOA1P02647 267 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 P04436 131 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 CCDC166P0CW27 439 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 PSMC3P17980 439 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 CPN2P22792 545 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 CALCRP30988 508 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 NTSP30990 170 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 ZNF33AQ06730 810 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 BCL2L1Q07817 233 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 TGM3Q08188 693 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 ASPHQ12797 758 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 ITGB3BPQ13352 177 aaPredicted RBP4.07□□□□□ -1.76
CPSF6-206ENST00000550987 ARL6IP1Q15041 203 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 OXA1LQ15070 435 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 DUSP7Q16829 419 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 FAM83EQ2M2I3 478 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 CCDC14Q49A88 953 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 BCL7AQ4VC05 210 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 SAMD4BQ5PRF9 694 aaKnown RBP4.07□□□□□ -1.76
CPSF6-206ENST00000550987 RAET1LQ5VY80 246 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 ENPP6Q6UWR7 440 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 LRRC74BQ6ZQY2 392 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 C19orf35Q6ZS72 473 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 ARCQ7LC44 396 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 SVOPLQ8N434 492 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 COMMD1Q8N668 190 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 STMN2Q93045 179 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.07□□□□□ -1.761e-6■■■■■ 31.4
CPSF6-206ENST00000550987 ISG20Q96AZ6 181 aaKnown RBP4.07□□□□□ -1.76
CPSF6-206ENST00000550987 NOL4LQ96MY1 436 aaPredicted RBP4.07□□□□□ -1.76
CPSF6-206ENST00000550987 TRNT1Q96Q11 434 aaKnown RBP4.07□□□□□ -1.76
CPSF6-206ENST00000550987 OSBPL10Q9BXB5 764 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 KRTAP4-2Q9BYR5 136 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 SPACA1Q9HBV2 294 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 NEK6Q9HC98 313 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 NT5MQ9NPB1 228 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 PISDQ9UG56 409 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 DDX19BQ9UMR2 479 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 CNTRLQ7Z7A1 2325 aa4.07□□□□□ -1.76
CPSF6-206ENST00000550987 FRG2CA6NGY1 282 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 TRDMT1O14717 391 aaKnown RBP4.06□□□□□ -1.76
CPSF6-206ENST00000550987 DFNA5O60443 496 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 UPK3AO75631 287 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 LGI1O95970 557 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 OR8U8P0C7N1 319 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 PABPC4LP0CB38 370 aaKnown RBP4.06□□□□□ -1.76
CPSF6-206ENST00000550987 PRKACAP17612 351 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 GDF1P27539 372 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 SHC1P29353 583 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 HTR2BP41595 481 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 CDKN1BP46527 198 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 SLC26A2P50443 739 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 GPM6AP51674 278 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 MAB21L1Q13394 359 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 UBE2SQ16763 222 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 GSG1Q2KHT4 349 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 PAGE2BQ5JRK9 111 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 ACOT7LQ6ZUV0 252 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 PGAP1Q75T13 922 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 HPS6Q86YV9 775 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 NUDCD3Q8IVD9 361 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 RNF10Q8N5U6 811 aaKnown RBP4.06□□□□□ -1.76
CPSF6-206ENST00000550987 CSGALNACT2Q8N6G5 542 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 WFDC11Q8NEX6 87 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 SDR9C7Q8NEX9 313 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 OR56B4Q8NH76 319 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 FAM110BQ8TC76 370 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 MITD1Q8WV92 249 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 TSEN15Q8WW01 171 aaKnown RBP4.06□□□□□ -1.76
CPSF6-206ENST00000550987 UFD1Q92890 307 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 TMIGD2Q96BF3 282 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 B3GALT6Q96L58 329 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 CNN2Q99439 309 aaKnown RBP4.06□□□□□ -1.76
CPSF6-206ENST00000550987 MCHR1Q99705 422 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 ANKRD19PQ9H560 264 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 LRRC19Q9H756 370 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 ZNF302Q9NR11 478 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 PSMC3IPQ9P2W1 217 aaPredicted RBP4.06□□□□□ -1.76
CPSF6-206ENST00000550987 STX18Q9P2W9 335 aaKnown RBP4.06□□□□□ -1.76
CPSF6-206ENST00000550987 KIAA1257Q9ULG3 409 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 PRG3Q9Y2Y8 225 aaPredicted RBP4.06□□□□□ -1.76
CPSF6-206ENST00000550987 RPL36Q9Y3U8 105 aaKnown RBP4.06□□□□□ -1.76
CPSF6-206ENST00000550987 FLVCR1Q9Y5Y0 555 aa4.06□□□□□ -1.76
CPSF6-206ENST00000550987 NFASCO94856 1347 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 LRRIQ3A6PVS8 624 aaPredicted RBP4.05□□□□□ -1.76
CPSF6-206ENST00000550987 ZNF705EA8MWA4 302 aaPredicted RBP4.05□□□□□ -1.76
CPSF6-206ENST00000550987 POLR1CO15160 346 aaPredicted RBP4.05□□□□□ -1.76
CPSF6-206ENST00000550987 CCL16O15467 120 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 LATO43561 262 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 TBL1XO60907 577 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 KLHL2O95198 593 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 LYPD3O95274 346 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 CSTAP01040 98 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 STSP08842 583 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 MSNP26038 577 aaKnown RBP4.05□□□□□ -1.76
CPSF6-206ENST00000550987 IL12AP29459 219 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 HTR1FP30939 366 aa4.05□□□□□ -1.76
CPSF6-206ENST00000550987 IFNA8P32881 189 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms