RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 ECH1Q13011 328 aa12.05□□□□□ -0.48
CALCOCO1-214ENST00000549613 ACSF3Q4G176 576 aaPredicted RBP12.05□□□□□ -0.48
CALCOCO1-214ENST00000549613 FBXW9Q5XUX1 488 aa12.05□□□□□ -0.48
CALCOCO1-214ENST00000549613 PLXDC2Q6UX71 529 aa12.05□□□□□ -0.48
CALCOCO1-214ENST00000549613 UNQ9370/PRO34162Q6UXP9 181 aa12.05□□□□□ -0.48
CALCOCO1-214ENST00000549613 TMEM91Q6ZNR0 172 aa12.05□□□□□ -0.48
CALCOCO1-214ENST00000549613 LINC00299Q6ZSB3 139 aa12.05□□□□□ -0.48
CALCOCO1-214ENST00000549613 FGD2Q7Z6J4 655 aa12.05□□□□□ -0.48
CALCOCO1-214ENST00000549613 UBE2J2Q8N2K1 259 aa12.05□□□□□ -0.48
CALCOCO1-214ENST00000549613 SLC22A24Q8N4F4 322 aa12.05□□□□□ -0.48
CALCOCO1-214ENST00000549613 ZNF676Q8N7Q3 588 aa12.05□□□□□ -0.48
CALCOCO1-214ENST00000549613 RNF166Q96A37 237 aaPredicted RBP12.05□□□□□ -0.48
CALCOCO1-214ENST00000549613 TRMT61AQ96FX7 289 aaKnown RBP12.05□□□□□ -0.48
CALCOCO1-214ENST00000549613 C4orf45Q96LM5 186 aa12.05□□□□□ -0.48
CALCOCO1-214ENST00000549613 RNF167Q9H6Y7 350 aa12.05□□□□□ -0.48
CALCOCO1-214ENST00000549613 CCDC59Q9P031 241 aaKnown RBP12.05□□□□□ -0.48
CALCOCO1-214ENST00000549613 A3GALT2U3KPV4 340 aa12.05□□□□□ -0.48
CALCOCO1-214ENST00000549613 CEP295Q9C0D2 2601 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 TMEM269A0A1B0GVZ9 245 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 ACOD1A6NK06 481 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 LOC110117498-PIK3R3F6TDL0 507 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 LRRTM2O43300 516 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 SC5DO75845 299 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 CLPXO76031 633 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 ZFPL1O95159 310 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 CRHP06850 196 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 MYL9P24844 172 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 CTSSP25774 331 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 MAPK3P27361 379 aaPredicted RBP12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 TGFBR1P36897 503 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 OR3A2P47893 321 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 MTNR1BP49286 362 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 RORCP51449 518 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 ARF1P84077 181 aaKnown RBP12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 EIF2S3LQ2VIR3 472 aaKnown RBP12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 ELFN2Q5R3F8 820 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 ZNF813Q6ZN06 617 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 ZNF704Q6ZNC4 412 aaPredicted RBP12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 CFAP77Q6ZQR2 320 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 FAM214BQ7L5A3 538 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 ZNF627Q7L945 461 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 LINGO2Q7L985 606 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 DPPA2Q7Z7J5 298 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 CATSPERDQ86XM0 798 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 LRRC18Q8N456 261 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 CISD2Q8N5K1 135 aaKnown RBP12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 FAM57AQ8TBR7 257 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 ZNF837Q96EG3 531 aaPredicted RBP12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 DACH2Q96NX9 599 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 KCNJ15Q99712 375 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 PDCD1LG2Q9BQ51 273 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 MMP27Q9H306 513 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 CXorf56Q9H5V9 222 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 MOB1AQ9H8S9 216 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 TIMM10BQ9Y5J6 103 aa12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 PHF3Q92576 2039 aaKnown RBP12.04□□□□□ -0.48
CALCOCO1-214ENST00000549613 SMG1Q96Q15 3661 aaKnown RBP12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 ZNF879B4DU55 563 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 CASKO14936 926 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 RER1O15258 196 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 SRSF10O75494 262 aaKnown RBP12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 CNOT4O95628 575 aaKnown RBP12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 TPOP07202 933 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 ABOP16442 354 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 MPGP29372 298 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 RPS19P39019 145 aaKnown RBP12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 FAPQ12884 760 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 RAB35Q15286 201 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 ZNF404Q494X3 552 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 SLC36A2Q495M3 483 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 ZMAT1Q5H9K5 638 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 WDR38Q5JTN6 314 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 C1orf185Q5T7R7 199 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 TMEM244Q5VVB8 128 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 SLC16A14Q7RTX9 510 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 TPRA1Q86W33 373 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 PRSS35Q8N3Z0 413 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 Q8NA96 180 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 OR10S1Q8NGN2 331 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 OR6K3Q8NGY3 331 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 MCFD2Q8NI22 146 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 GPR148Q8TDV2 347 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 ZFP3Q96NJ6 502 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 BBC3Q96PG8 261 aaPredicted RBP12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 HDHD2Q9H0R4 259 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 C12orf49Q9H741 205 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 SNTG1Q9NSN8 517 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 DDX28Q9NUL7 540 aaKnown RBP12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 OR52A1Q9UKL2 312 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 GTF2A1LQ9UNN4 478 aa12.03□□□□□ -0.48
CALCOCO1-214ENST00000549613 TRAV1-2A0A0B4J238 106 aa12.02□□□□□ -0.49
CALCOCO1-214ENST00000549613 MBD3L4A6NDZ8 208 aaPredicted RBP12.02□□□□□ -0.49
CALCOCO1-214ENST00000549613 MBD3L3A6NE82 208 aaPredicted RBP12.02□□□□□ -0.49
CALCOCO1-214ENST00000549613 MBD3L5A6NJ08 208 aaPredicted RBP12.02□□□□□ -0.49
CALCOCO1-214ENST00000549613 PNPP00491 289 aa12.02□□□□□ -0.49
CALCOCO1-214ENST00000549613 IGHV3-9P01782 118 aa12.02□□□□□ -0.49
CALCOCO1-214ENST00000549613 RAF1P04049 648 aa12.02□□□□□ -0.49
CALCOCO1-214ENST00000549613 B4GALT1P15291 398 aa12.02□□□□□ -0.49
CALCOCO1-214ENST00000549613 SDC2P34741 201 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms