RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, human

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-223	ENST00000542552	POM121	Q96HA1	1249 aa		13.21	□□□□□ -0.29
ECHDC2-223	ENST00000542552	PIMREG	Q9BSJ6	248 aa		13.21	□□□□□ -0.29
ECHDC2-223	ENST00000542552	RBM4	Q9BWF3	364 aa	Known RBP	13.21	□□□□□ -0.29
ECHDC2-223	ENST00000542552	OR2J1	Q9GZK6	312 aa		13.21	□□□□□ -0.29
ECHDC2-223	ENST00000542552	FN3K	Q9H479	309 aa		13.21	□□□□□ -0.29
ECHDC2-223	ENST00000542552	YY1AP1	Q9H869	796 aa		13.21	□□□□□ -0.29
ECHDC2-223	ENST00000542552	ELOVL3	Q9HB03	270 aa		13.21	□□□□□ -0.29
ECHDC2-223	ENST00000542552	HINT3	Q9NQE9	182 aa	Known RBP	13.21	□□□□□ -0.29
ECHDC2-223	ENST00000542552	TBC1D23	Q9NUY8	699 aa		13.21	□□□□□ -0.29
ECHDC2-223	ENST00000542552	TBCCD1	Q9NVR7	557 aa		13.21	□□□□□ -0.29
ECHDC2-223	ENST00000542552	PLEK2	Q9NYT0	353 aa		13.21	□□□□□ -0.29
ECHDC2-223	ENST00000542552	DNAJB9	Q9UBS3	223 aa		13.21	□□□□□ -0.29
ECHDC2-223	ENST00000542552	GPR160	Q9UJ42	338 aa		13.21	□□□□□ -0.29
ECHDC2-223	ENST00000542552	BAIAP2	Q9UQB8	552 aa		13.21	□□□□□ -0.29
ECHDC2-223	ENST00000542552	C17orf100	A8MU93	164 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	CD5L	O43866	347 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	SOX14	O95416	240 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	HPX	P02790	462 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	TUBG1	P23258	451 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	GGT2	P36268	569 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	MPV17	P39210	176 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	CENPA	P49450	140 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	MMP15	P51511	669 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	PPP1CB	P62140	327 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	CBX1	P83916	185 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	TEK	Q02763	1124 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	RIN1	Q13671	783 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	MOG	Q16653	247 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	NKPD1	Q17RQ9	610 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	RSPO1	Q2MKA7	263 aa	Predicted RBP	13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	TMEM249	Q2WGJ8	235 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	SLC36A3	Q495N2	470 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	SPATA46	Q5T0L3	261 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	CYB561A3	Q8NBI2	242 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	SLC37A3	Q8NCC5	494 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	ICA1L	Q8NDH6	482 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	ZNF540	Q8NDQ6	660 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	OR2T33	Q8NG76	320 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	ZNRF4	Q8WWF5	429 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	IPCEF1	Q8WWN9	437 aa	Predicted RBP	13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	SLC7A6	Q92536	515 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	NMNAT2	Q9BZQ4	307 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	MMADHC	Q9H3L0	296 aa	Predicted RBP	13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	TUBG2	Q9NRH3	451 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	ARMC1	Q9NVT9	282 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	MRPL22	Q9NWU5	206 aa	Known RBP	13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	NKIRAS2	Q9NYR9	191 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	CYB5R1	Q9UHQ9	305 aa		13.2	□□□□□ -0.3
ECHDC2-223	ENST00000542552	GNGT2	O14610	69 aa		13.19	□□□□□ -0.3
ECHDC2-223	ENST00000542552	NCR1	O76036	304 aa		13.19	□□□□□ -0.3
ECHDC2-223	ENST00000542552	ABHD16A	O95870	558 aa		13.19	□□□□□ -0.3
ECHDC2-223	ENST00000542552	ARHGDIA	P52565	204 aa		13.19	□□□□□ -0.3
ECHDC2-223	ENST00000542552	MRPS11	P82912	194 aa	Known RBP	13.19	□□□□□ -0.3
ECHDC2-223	ENST00000542552	CARTPT	Q16568	116 aa		13.19	□□□□□ -0.3
ECHDC2-223	ENST00000542552	ALKBH6	Q3KRA9	238 aa		13.19	□□□□□ -0.3
ECHDC2-223	ENST00000542552	KRTAP27-1	Q3LI81	207 aa		13.19	□□□□□ -0.3
ECHDC2-223	ENST00000542552	SLC18B1	Q6NT16	456 aa		13.19	□□□□□ -0.3
ECHDC2-223	ENST00000542552	CORO6	Q6QEF8	472 aa		13.19	□□□□□ -0.3
ECHDC2-223	ENST00000542552	OR2T4	Q8NH00	348 aa		13.19	□□□□□ -0.3
ECHDC2-223	ENST00000542552	UTP4	Q969X6	686 aa	Known RBP	13.19	□□□□□ -0.3
ECHDC2-223	ENST00000542552	DCLRE1C	Q96SD1	692 aa	Known RBP	13.19	□□□□□ -0.3
ECHDC2-223	ENST00000542552	COQ7	Q99807	217 aa		13.19	□□□□□ -0.3
ECHDC2-223	ENST00000542552	HDHD2	Q9H0R4	259 aa		13.19	□□□□□ -0.3
ECHDC2-223	ENST00000542552	POFUT1	Q9H488	388 aa		13.19	□□□□□ -0.3
ECHDC2-223	ENST00000542552	NTN4	Q9HB63	628 aa		13.19	□□□□□ -0.3
ECHDC2-223	ENST00000542552	PDP1	Q9P0J1	537 aa	Predicted RBP	13.19	□□□□□ -0.3
ECHDC2-223	ENST00000542552	KLHL21	Q9UJP4	597 aa		13.19	□□□□□ -0.3
ECHDC2-223	ENST00000542552	IGHV4-61	A0A0C4DH41	118 aa		13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	INAFM1	C9JVW0	142 aa		13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	LYNX1	G3V0Z9	82 aa		13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	TLX2	O43763	284 aa	Predicted RBP	13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	DBH	P09172	617 aa		13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	TACSTD2	P09758	323 aa		13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	LYNX1	P0DP58	116 aa		13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	COL8A2	P25067	703 aa		13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	GCH1	P30793	250 aa		13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	PYCR1	P32322	319 aa		13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	ERF	P50548	548 aa		13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	SLC25A1	P53007	311 aa		13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	CRMP1	Q14194	572 aa		13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	PCGF3	Q3KNV8	242 aa		13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	TMEM154	Q6P9G4	183 aa		13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	CFAP77	Q6ZQR2	320 aa		13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	HS3ST5	Q8IZT8	346 aa		13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	GTF3A	Q92664	365 aa	Known RBP	13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	RDH5	Q92781	318 aa		13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	BPESC1	Q9GZL8	116 aa		13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	CMC2	Q9NRP2	79 aa		13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	KCNG2	Q9UJ96	466 aa		13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	POLR1D	Q9Y2S0	133 aa		13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	STARD10	Q9Y365	291 aa		13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	GRIP1	Q9Y3R0	1128 aa		13.18	□□□□□ -0.3
ECHDC2-223	ENST00000542552	ABCA2	Q9BZC7	2435 aa		13.17	□□□□□ -0.3
ECHDC2-223	ENST00000542552		J3QW42	95 aa		13.17	□□□□□ -0.3
ECHDC2-223	ENST00000542552	E2F6	O75461	281 aa		13.17	□□□□□ -0.3
ECHDC2-223	ENST00000542552	RP2	O75695	350 aa		13.17	□□□□□ -0.3
ECHDC2-223	ENST00000542552	ADH4	P08319	380 aa		13.17	□□□□□ -0.3
ECHDC2-223	ENST00000542552	IGHV4-31	P0DP07	118 aa		13.17	□□□□□ -0.3
ECHDC2-223	ENST00000542552	ZNF23	P17027	643 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms