RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 SFRP5Q5T4F7 317 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 DCAF12L2Q5VW00 463 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 WDR74Q6RFH5 385 aaPredicted RBP14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 GPAT4Q86UL3 456 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 SCARB1Q8WTV0 552 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 RELTQ969Z4 430 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 CCDC120Q96HB5 630 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 ZNF576Q9H609 170 aa14.34□□□□□ -0.11
CHMP1A-202ENST00000535997 FXYD6-FXYD2A0A087WZ82 144 aa14.33□□□□□ -0.12
CHMP1A-202ENST00000535997 METTL21EPA6NDL7 271 aa14.33□□□□□ -0.12
CHMP1A-202ENST00000535997 ZNF736B4DX44 427 aaPredicted RBP14.33□□□□□ -0.12
CHMP1A-202ENST00000535997 RAB6AP20340 208 aa14.33□□□□□ -0.12
CHMP1A-202ENST00000535997 FMODQ06828 376 aa14.33□□□□□ -0.12
CHMP1A-202ENST00000535997 RAB12Q6IQ22 244 aa14.33□□□□□ -0.12
CHMP1A-202ENST00000535997 RGS7BPQ6MZT1 257 aaPredicted RBP14.33□□□□□ -0.12
CHMP1A-202ENST00000535997 APCDD1LQ8NCL9 501 aa14.33□□□□□ -0.12
CHMP1A-202ENST00000535997 STT3BQ8TCJ2 826 aa14.33□□□□□ -0.12
CHMP1A-202ENST00000535997 RNF133Q8WVZ7 376 aa14.33□□□□□ -0.12
CHMP1A-202ENST00000535997 EDAQ92838 391 aa14.33□□□□□ -0.12
CHMP1A-202ENST00000535997 WBP1Q96G27 269 aa14.33□□□□□ -0.12
CHMP1A-202ENST00000535997 FXYD6Q9H0Q3 95 aa14.33□□□□□ -0.12
CHMP1A-202ENST00000535997 CABIN1Q9Y6J0 2220 aa14.33□□□□□ -0.12
CHMP1A-202ENST00000535997 hCG_1807616A0A1W2PRN6 198 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 AMY2AP04746 511 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 ACSM4P0C7M7 580 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 HSF1Q00613 529 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 TLE3Q04726 772 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 SHISA6Q6ZSJ9 500 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 LINC00346Q8IVM7 164 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 C12orf45Q8N5I9 185 aaPredicted RBP14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 DDIT4LQ96D03 193 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 EDEM2Q9BV94 578 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 TINAGL1Q9GZM7 467 aaPredicted RBP14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 RAB22AQ9UL26 194 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 SRPK3Q9UPE1 567 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 SPEF1Q9Y4P9 236 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 IGHV3-20A0A0C4DH32 117 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 NMBP08949 121 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 H2BFMP0C1H6 154 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 ZNF735P0CB33 412 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 RPA2P15927 270 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 FBXW4P57775 412 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 WDR45BQ5MNZ6 344 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 TMEM65Q6PI78 240 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 GSG1LQ6UXU4 331 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 ZNF813Q6ZN06 617 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 C16orf47Q6ZP98 133 aaPredicted RBP14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 SLC25A45Q8N413 288 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 NPAS1Q99742 590 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 REG4Q9BYZ8 158 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 CHST11Q9NPF2 352 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 FANCFQ9NPI8 374 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 SLC22A11Q9NSA0 550 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 B3GALT5Q9Y2C3 310 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 MYO15AQ9UKN7 3530 aa14.32□□□□□ -0.12
CHMP1A-202ENST00000535997 MFSD2BA6NFX1 497 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 RFPL4AA6NLU0 287 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 RFPL4AL1F8VTS6 287 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 POU3F1Q03052 451 aaPredicted RBP14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 BAMBIQ13145 260 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 RHBDD2Q6NTF9 364 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 COX15Q7KZN9 410 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 GALNT16Q8N428 558 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 NFAM1Q8NET5 270 aaPredicted RBP14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 NUBPLQ8TB37 319 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 GAL3ST1Q99999 423 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 ZNF768Q9H5H4 540 aaKnown RBP14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 CENPMQ9NSP4 180 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 SDHAF2Q9NX18 166 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 IGLV3-12A0A075B6K2 115 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 C2orf72A6NCS6 295 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 VSTM2BA6NLU5 285 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 M0QYG6 137 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 ZNF354AO60765 605 aaPredicted RBP14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 NAGAP17050 411 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 POU3F2P20265 443 aaPredicted RBP14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 GPR85P60893 370 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 MEF2DQ14814 521 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 MOGAT2Q3SYC2 334 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 OR10K2Q6IF99 312 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 BPIFB2Q8N4F0 458 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 OR4D6Q8NGJ1 314 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 OR6K3Q8NGY3 331 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 AQP3Q92482 292 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 B3GNT4Q9C0J1 378 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 MFFQ9GZY8 342 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 ZMAT3Q9HA38 289 aaKnown RBP14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 MED29Q9NX70 200 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 GDF2Q9UK05 429 aaPredicted RBP14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 CA14Q9ULX7 337 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 RHBDD3Q9Y3P4 386 aa14.31□□□□□ -0.12
CHMP1A-202ENST00000535997 IGKV1D-43A0A0B4J1Z2 117 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 ETV2O00321 342 aaPredicted RBP14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 P2RY10O00398 339 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 SCO1O75880 301 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 HSD11B1P28845 292 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 BDKRB2P30411 391 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 PHF19Q5T6S3 580 aa14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 ATPAF1Q5TC12 328 aaPredicted RBP14.3□□□□□ -0.12
CHMP1A-202ENST00000535997 ARSKQ6UWY0 536 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms