RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 EMC7Q9NPA0 242 aa17.52■□□□□ 0.4
USP53-208ENST00000514305 HAO2Q9NYQ3 351 aa17.52■□□□□ 0.4
USP53-208ENST00000514305 CRNNQ9UBG3 495 aaPredicted RBP17.52■□□□□ 0.4
USP53-208ENST00000514305 RAB26Q9ULW5 256 aa17.52■□□□□ 0.4
USP53-208ENST00000514305 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.51■□□□□ 0.39
USP53-208ENST00000514305 A0A1W2PR80 420 aa17.51■□□□□ 0.39
USP53-208ENST00000514305 M0R1B8 84 aa17.51■□□□□ 0.39
USP53-208ENST00000514305 ZNF593O00488 134 aaPredicted RBP17.51■□□□□ 0.39
USP53-208ENST00000514305 IGKV3-15P01624 115 aa17.51■□□□□ 0.39
USP53-208ENST00000514305 TFP02787 698 aa17.51■□□□□ 0.39
USP53-208ENST00000514305 SERPINA5P05154 406 aa17.51■□□□□ 0.39
USP53-208ENST00000514305 THBDP07204 575 aa17.51■□□□□ 0.39
USP53-208ENST00000514305 ZNF32P17041 273 aa17.51■□□□□ 0.39
USP53-208ENST00000514305 APLNRP35414 380 aa17.51■□□□□ 0.39
USP53-208ENST00000514305 ENDOGQ14249 297 aaKnown RBP17.51■□□□□ 0.39
USP53-208ENST00000514305 C22orf34Q6ZV56 151 aa17.51■□□□□ 0.39
USP53-208ENST00000514305 Q71RC1 249 aaPredicted RBP17.51■□□□□ 0.39
USP53-208ENST00000514305 MDP1Q86V88 176 aa17.51■□□□□ 0.39
USP53-208ENST00000514305 ERI1Q8IV48 349 aaKnown RBP17.51■□□□□ 0.39
USP53-208ENST00000514305 ZNF511Q8NB15 262 aa17.51■□□□□ 0.39
USP53-208ENST00000514305 OR6N2Q8NGY6 317 aa17.51■□□□□ 0.39
USP53-208ENST00000514305 IPCEF1Q8WWN9 437 aaPredicted RBP17.51■□□□□ 0.39
USP53-208ENST00000514305 ZMYND19Q96E35 227 aaPredicted RBP17.51■□□□□ 0.39
USP53-208ENST00000514305 PERPQ96FX8 193 aa17.51■□□□□ 0.39
USP53-208ENST00000514305 ZNF582Q96NG8 517 aaPredicted RBP17.51■□□□□ 0.39
USP53-208ENST00000514305 MARCH7Q9H992 704 aa17.51■□□□□ 0.39
USP53-208ENST00000514305 PLEK2Q9NYT0 353 aa17.51■□□□□ 0.39
USP53-208ENST00000514305 ASH2LQ9UBL3 628 aa17.51■□□□□ 0.39
USP53-208ENST00000514305 RPL36Q9Y3U8 105 aaKnown RBP17.51■□□□□ 0.39
USP53-208ENST00000514305 PCDHGB1Q9Y5G3 927 aa17.51■□□□□ 0.39
USP53-208ENST00000514305 TVP23AA6NH52 213 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 PHYHO14832 338 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 SGCEO43556 437 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 MPZL1O95297 269 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 CRYAAP02489 173 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 COX5BP10606 129 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 SLC2A5P22732 501 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 ZNF83P51522 516 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 TUBA1BP68363 451 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 TUBA4AP68366 448 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 ECH1Q13011 328 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 TBC1D28Q2M2D7 210 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 LINC01590Q5TEZ4 76 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 ARL9Q6T311 187 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 PRSS57Q6UWY2 283 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 TUBA1AQ71U36 451 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 THAP5Q7Z6K1 395 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 BBS1Q8NFJ9 593 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 FBXO17Q96EF6 278 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 Q96MF0 132 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 CNN2Q99439 309 aaKnown RBP17.5■□□□□ 0.39
USP53-208ENST00000514305 YIPF3Q9GZM5 350 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 MRPL22Q9NWU5 206 aaKnown RBP17.5■□□□□ 0.39
USP53-208ENST00000514305 DNAJC27Q9NZQ0 273 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 CYB5R1Q9UHQ9 305 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 ATPIF1Q9UII2 106 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 SPEF1Q9Y4P9 236 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 COMMD3-BMI1R4GMX3 469 aa17.5■□□□□ 0.39
USP53-208ENST00000514305 IRGMA1A4Y4 181 aa17.49■□□□□ 0.39
USP53-208ENST00000514305 M0R129 80 aa17.49■□□□□ 0.39
USP53-208ENST00000514305 CD3EP07766 207 aa17.49■□□□□ 0.39
USP53-208ENST00000514305 MMP7P09237 267 aaPredicted RBP17.49■□□□□ 0.39
USP53-208ENST00000514305 SPARCP09486 303 aa17.49■□□□□ 0.39
USP53-208ENST00000514305 LOXP28300 417 aaPredicted RBP17.49■□□□□ 0.39
USP53-208ENST00000514305 IDH3GP51553 393 aaPredicted RBP17.49■□□□□ 0.39
USP53-208ENST00000514305 NUDT6P53370 316 aa17.49■□□□□ 0.39
USP53-208ENST00000514305 CSNK2BP67870 215 aa17.49■□□□□ 0.39
USP53-208ENST00000514305 GGTLC2Q14390 218 aa17.49■□□□□ 0.39
USP53-208ENST00000514305 MEP1BQ16820 701 aa17.49■□□□□ 0.39
USP53-208ENST00000514305 SLC18B1Q6NT16 456 aa17.49■□□□□ 0.39
USP53-208ENST00000514305 UGT2A3Q6UWM9 527 aa17.49■□□□□ 0.39
USP53-208ENST00000514305 ZNF704Q6ZNC4 412 aaPredicted RBP17.49■□□□□ 0.39
USP53-208ENST00000514305 SLC16A9Q7RTY1 509 aa17.49■□□□□ 0.39
USP53-208ENST00000514305 ZNF184Q99676 751 aaPredicted RBP17.49■□□□□ 0.39
USP53-208ENST00000514305 C1QTNF6Q9BXI9 259 aa17.49■□□□□ 0.39
USP53-208ENST00000514305 OR2H1Q9GZK4 316 aa17.49■□□□□ 0.39
USP53-208ENST00000514305 HDHD2Q9H0R4 259 aa17.49■□□□□ 0.39
USP53-208ENST00000514305 WDR76Q9H967 626 aa17.49■□□□□ 0.39
USP53-208ENST00000514305 ZNF224Q9NZL3 707 aa17.49■□□□□ 0.39
USP53-208ENST00000514305 VSTM5A8MXK1 200 aa17.48■□□□□ 0.39
USP53-208ENST00000514305 ENTPD6O75354 484 aa17.48■□□□□ 0.39
USP53-208ENST00000514305 GPANK1O95872 356 aa17.48■□□□□ 0.39
USP53-208ENST00000514305 IGLV1-44P01699 117 aa17.48■□□□□ 0.39
USP53-208ENST00000514305 SCG5P05408 212 aa17.48■□□□□ 0.39
USP53-208ENST00000514305 HEXAP06865 529 aa17.48■□□□□ 0.39
USP53-208ENST00000514305 CD40P25942 277 aa17.48■□□□□ 0.39
USP53-208ENST00000514305 SLC15A1P46059 708 aa17.48■□□□□ 0.39
USP53-208ENST00000514305 MTNR1AP48039 350 aa17.48■□□□□ 0.39
USP53-208ENST00000514305 GDI2P50395 445 aaKnown RBP17.48■□□□□ 0.39
USP53-208ENST00000514305 PSG4Q00888 419 aa17.48■□□□□ 0.39
USP53-208ENST00000514305 RAB39AQ14964 217 aa17.48■□□□□ 0.39
USP53-208ENST00000514305 MAD2L1BPQ15013 274 aaPredicted RBP17.48■□□□□ 0.39
USP53-208ENST00000514305 RAB35Q15286 201 aa17.48■□□□□ 0.39
USP53-208ENST00000514305 PCK2Q16822 640 aa17.48■□□□□ 0.39
USP53-208ENST00000514305 KLHL22Q53GT1 634 aa17.48■□□□□ 0.39
USP53-208ENST00000514305 PABPC1L2AQ5JQF8 200 aa17.48■□□□□ 0.39
USP53-208ENST00000514305 ELFN2Q5R3F8 820 aa17.48■□□□□ 0.39
USP53-208ENST00000514305 NCMAPQ5T1S8 102 aa17.48■□□□□ 0.39
USP53-208ENST00000514305 C6orf52Q5T4I8 152 aa17.48■□□□□ 0.39
USP53-208ENST00000514305 SEZ6L2Q6UXD5 910 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms