RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 FOXG1P55316 489 aaPredicted RBP18.12■□□□□ 0.49
KPNA1-210ENST00000494339 LY6DQ14210 128 aa18.12■□□□□ 0.49
KPNA1-210ENST00000494339 CDK5R1Q15078 307 aa18.12■□□□□ 0.49
KPNA1-210ENST00000494339 FAM27BQ5VT28 67 aa18.12■□□□□ 0.49
KPNA1-210ENST00000494339 SEM1Q6ZVN7 128 aa18.12■□□□□ 0.49
KPNA1-210ENST00000494339 RPRMLQ8N4K4 120 aa18.12■□□□□ 0.49
KPNA1-210ENST00000494339 MS4A15Q8N5U1 240 aa18.12■□□□□ 0.49
KPNA1-210ENST00000494339 OR10S1Q8NGN2 331 aa18.12■□□□□ 0.49
KPNA1-210ENST00000494339 RNF166Q96A37 237 aaPredicted RBP18.12■□□□□ 0.49
KPNA1-210ENST00000494339 EMC9Q9Y3B6 208 aa18.12■□□□□ 0.49
KPNA1-210ENST00000494339 FAM215AQ9Y5M1 114 aa18.12■□□□□ 0.49
KPNA1-210ENST00000494339 INTS1Q8N201 2190 aaKnown RBP18.12■□□□□ 0.49
KPNA1-210ENST00000494339 TRBV2A0A0J9YWF9 115 aa18.11■□□□□ 0.49
KPNA1-210ENST00000494339 HSPB2A8KAH6 182 aa18.11■□□□□ 0.49
KPNA1-210ENST00000494339 RPS19P39019 145 aaKnown RBP18.11■□□□□ 0.49
KPNA1-210ENST00000494339 TGM4P49221 684 aa18.11■□□□□ 0.49
KPNA1-210ENST00000494339 NANOS3P60323 173 aaKnown RBP18.11■□□□□ 0.49
KPNA1-210ENST00000494339 DCTN2Q13561 401 aaKnown RBP18.11■□□□□ 0.49
KPNA1-210ENST00000494339 GUSBP1Q15486 140 aa18.11■□□□□ 0.49
KPNA1-210ENST00000494339 HSPB2Q16082 182 aa18.11■□□□□ 0.49
KPNA1-210ENST00000494339 OR2A2Q6IF42 318 aa18.11■□□□□ 0.49
KPNA1-210ENST00000494339 OR6Q1Q8NGQ2 317 aa18.11■□□□□ 0.49
KPNA1-210ENST00000494339 RNF133Q8WVZ7 376 aa18.11■□□□□ 0.49
KPNA1-210ENST00000494339 S100ZQ8WXG8 99 aa18.11■□□□□ 0.49
KPNA1-210ENST00000494339 HDHD5Q9BXW7 423 aa18.11■□□□□ 0.49
KPNA1-210ENST00000494339 GALNT8Q9NY28 637 aa18.11■□□□□ 0.49
KPNA1-210ENST00000494339 RP1L1Q8IWN7 2480 aaPredicted RBP18.11■□□□□ 0.49
KPNA1-210ENST00000494339 TTLL8A6PVC2 850 aa18.11■□□□□ 0.49
KPNA1-210ENST00000494339 OR3A2P47893 321 aa18.11■□□□□ 0.49
KPNA1-210ENST00000494339 RORCP51449 518 aa18.11■□□□□ 0.49
KPNA1-210ENST00000494339 RIDAP52758 137 aaKnown RBP18.11■□□□□ 0.49
KPNA1-210ENST00000494339 PER3P56645 1201 aa18.11■□□□□ 0.49
KPNA1-210ENST00000494339 ARF1P84077 181 aaKnown RBP18.11■□□□□ 0.49
KPNA1-210ENST00000494339 FOXF2Q12947 444 aa18.11■□□□□ 0.49
KPNA1-210ENST00000494339 C1orf185Q5T7R7 199 aa18.11■□□□□ 0.49
KPNA1-210ENST00000494339 KLHL24Q6TFL4 600 aa18.11■□□□□ 0.49
KPNA1-210ENST00000494339 ZNF813Q6ZN06 617 aa18.11■□□□□ 0.49
KPNA1-210ENST00000494339 SLC22A24Q8N4F4 322 aa18.11■□□□□ 0.49
KPNA1-210ENST00000494339 SMIM19Q96E16 107 aa18.11■□□□□ 0.49
KPNA1-210ENST00000494339 FBXO17Q96EF6 278 aa18.11■□□□□ 0.49
KPNA1-210ENST00000494339 PLGRKTQ9HBL7 147 aa18.11■□□□□ 0.49
KPNA1-210ENST00000494339 FBXL3Q9UKT7 428 aa18.11■□□□□ 0.49
KPNA1-210ENST00000494339 MBD3L4A6NDZ8 208 aaPredicted RBP18.1■□□□□ 0.49
KPNA1-210ENST00000494339 MBD3L3A6NE82 208 aaPredicted RBP18.1■□□□□ 0.49
KPNA1-210ENST00000494339 MBD3L5A6NJ08 208 aaPredicted RBP18.1■□□□□ 0.49
KPNA1-210ENST00000494339 RPL36A-HNRNPH2H7BZ11 118 aa18.1■□□□□ 0.49
KPNA1-210ENST00000494339 H2BFMP0C1H6 154 aa18.1■□□□□ 0.49
KPNA1-210ENST00000494339 PTGER4P35408 488 aa18.1■□□□□ 0.49
KPNA1-210ENST00000494339 OPRL1P41146 370 aa18.1■□□□□ 0.49
KPNA1-210ENST00000494339 KIR2DL2P43627 348 aaPredicted RBP18.1■□□□□ 0.49
KPNA1-210ENST00000494339 GDI2P50395 445 aaKnown RBP18.1■□□□□ 0.49
KPNA1-210ENST00000494339 BMXP51813 675 aa18.1■□□□□ 0.49
KPNA1-210ENST00000494339 ZNF829Q3KNS6 432 aaPredicted RBP18.1■□□□□ 0.49
KPNA1-210ENST00000494339 FBXW9Q5XUX1 488 aa18.1■□□□□ 0.49
KPNA1-210ENST00000494339 MBD3L2Q8NHZ7 208 aaPredicted RBP18.1■□□□□ 0.49
KPNA1-210ENST00000494339 GHSRQ92847 366 aa18.1■□□□□ 0.49
KPNA1-210ENST00000494339 PGLYRP3Q96LB9 341 aa18.1■□□□□ 0.49
KPNA1-210ENST00000494339 PDCD1LG2Q9BQ51 273 aa18.1■□□□□ 0.49
KPNA1-210ENST00000494339 HMG20AQ9NP66 347 aa18.1■□□□□ 0.49
KPNA1-210ENST00000494339 CDRT1O95170 752 aa18.1■□□□□ 0.49
KPNA1-210ENST00000494339 SERPINA3P01011 423 aa18.1■□□□□ 0.49
KPNA1-210ENST00000494339 INSL4Q14641 139 aa18.1■□□□□ 0.49
KPNA1-210ENST00000494339 VWA1Q6PCB0 445 aa18.1■□□□□ 0.49
KPNA1-210ENST00000494339 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.1■□□□□ 0.49
KPNA1-210ENST00000494339 CNTNAP3BQ96NU0 1288 aa18.1■□□□□ 0.49
KPNA1-210ENST00000494339 DCLRE1CQ96SD1 692 aaKnown RBP18.1■□□□□ 0.49
KPNA1-210ENST00000494339 CNTNAP3Q9BZ76 1288 aa18.1■□□□□ 0.49
KPNA1-210ENST00000494339 MALT1Q9UDY8 824 aa18.1■□□□□ 0.49
KPNA1-210ENST00000494339 PRRG2O14669 202 aa18.09■□□□□ 0.49
KPNA1-210ENST00000494339 GPRIN2O60269 458 aa18.09■□□□□ 0.49
KPNA1-210ENST00000494339 TOXO94900 526 aa18.09■□□□□ 0.49
KPNA1-210ENST00000494339 TFAP2EQ6VUC0 442 aa18.09■□□□□ 0.49
KPNA1-210ENST00000494339 TMEM91Q6ZNR0 172 aa18.09■□□□□ 0.49
KPNA1-210ENST00000494339 SLC25A46Q96AG3 418 aa18.09■□□□□ 0.49
KPNA1-210ENST00000494339 PNRC2Q9NPJ4 139 aaKnown RBP18.09■□□□□ 0.49
KPNA1-210ENST00000494339 SNTG1Q9NSN8 517 aa18.09■□□□□ 0.49
KPNA1-210ENST00000494339 FRRS1LQ9P0K9 344 aa18.09■□□□□ 0.49
KPNA1-210ENST00000494339 GTF2A1LQ9UNN4 478 aa18.09■□□□□ 0.49
KPNA1-210ENST00000494339 RTTNQ86VV8 2226 aa18.09■□□□□ 0.49
KPNA1-210ENST00000494339 A0A075B6Q4 140 aa18.08■□□□□ 0.49
KPNA1-210ENST00000494339 A0A096LPE4 126 aa18.08■□□□□ 0.49
KPNA1-210ENST00000494339 A0A1W2PPZ6 126 aa18.08■□□□□ 0.49
KPNA1-210ENST00000494339 CLDN25C9JDP6 229 aa18.08■□□□□ 0.49
KPNA1-210ENST00000494339 ZNF878C9JN71 531 aa18.08■□□□□ 0.49
KPNA1-210ENST00000494339 SLC19A2O60779 497 aa18.08■□□□□ 0.49
KPNA1-210ENST00000494339 PNPP00491 289 aa18.08■□□□□ 0.49
KPNA1-210ENST00000494339 PATE4P0C8F1 98 aa18.08■□□□□ 0.49
KPNA1-210ENST00000494339 MFGE8Q08431 387 aaPredicted RBP18.08■□□□□ 0.49
KPNA1-210ENST00000494339 ALKBH1Q13686 389 aaKnown RBP18.08■□□□□ 0.49
KPNA1-210ENST00000494339 GJC3Q8NFK1 279 aa18.08■□□□□ 0.49
KPNA1-210ENST00000494339 OR2G2Q8NGZ5 317 aa18.08■□□□□ 0.49
KPNA1-210ENST00000494339 RPS4Y2Q8TD47 263 aa18.08■□□□□ 0.49
KPNA1-210ENST00000494339 WDR12Q9GZL7 423 aaKnown RBP18.08■□□□□ 0.49
KPNA1-210ENST00000494339 SLC5A6Q9Y289 635 aa18.08■□□□□ 0.49
KPNA1-210ENST00000494339 ZNF254O75437 659 aa18.08■□□□□ 0.48
KPNA1-210ENST00000494339 FARS2O95363 451 aaKnown RBP18.08■□□□□ 0.48
KPNA1-210ENST00000494339 CST2P09228 141 aa18.08■□□□□ 0.48
KPNA1-210ENST00000494339 CD8BP10966 210 aa18.08■□□□□ 0.48
KPNA1-210ENST00000494339 SFTPCP11686 197 aa18.08■□□□□ 0.48
KPNA1-210ENST00000494339 SDC2P34741 201 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms