RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 TROVE2P10155 538 aaKnown RBP eCLIP13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 NR2C1P13056 603 aa13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 GSTM3P21266 225 aa13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 SLC6A9P48067 706 aa13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 CENPAP49450 140 aa13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 BTG1P62324 171 aa13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 ZBED5Q49AG3 693 aa13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 ARMCX4Q5H9R4 360 aa13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 COQ5Q5HYK3 327 aa13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 CORO6Q6QEF8 472 aa13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 UNQ6126/PRO20091Q6UXV3 157 aa13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 PTCHD4Q6ZW05 846 aa13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 MBOAT2Q6ZWT7 520 aa13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 FAM122BQ7Z309 247 aa13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 LRRC28Q86X40 367 aaPredicted RBP13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 TREML1Q86YW5 311 aa13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 ZNF283Q8N7M2 679 aa13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 PCYOX1LQ8NBM8 494 aa13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 C19orf18Q8NEA5 215 aa13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 ACOT11Q8WXI4 607 aaPredicted RBP13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 SYT4Q9H2B2 425 aa13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 ARGLU1Q9NWB6 273 aaPredicted RBP13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 ASH2LQ9UBL3 628 aa13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 NDRG4Q9ULP0 352 aaKnown RBP13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 PPP1R3CQ9UQK1 317 aa13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 IER3IP1Q9Y5U9 82 aa13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 CAPN7Q9Y6W3 813 aa13.36□□□□□ -0.27
ERGIC3-217ENST00000488935 MDFIC2A0A1B0GVS7 189 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 PRSS37A4D1T9 235 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 GMNCA6NCL1 334 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 DNAJC9-AS1A6NH13 148 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 XKRYO14609 159 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 ICMTO60725 284 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 NPPAP01160 153 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 IGHV4-38-2P0DP08 117 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 IFNA8P32881 189 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 LIPAP38571 399 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 LIMS1P48059 325 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 SLC7A2P52569 658 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 KRR1Q13601 381 aaKnown RBP13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 MAPRE2Q15555 327 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 IFI44LQ53G44 452 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 FAM205BPQ63HN1 556 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 ARL9Q6T311 187 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 KLHL36Q8N4N3 616 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 TEX29Q8N6K0 151 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 BHLHE23Q8NDY6 225 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 LZICQ8WZA0 190 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 HAVCR1Q96D42 359 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 SAMD8Q96LT4 415 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 DIRC2Q96SL1 478 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 NMNAT1Q9HAN9 279 aaPredicted RBP13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 TBCCD1Q9NVR7 557 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 NUP50Q9UKX7 468 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 INSIG2Q9Y5U4 225 aa13.35□□□□□ -0.27
ERGIC3-217ENST00000488935 CEACAM18A8MTB9 384 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 TMEM178BH3BS89 294 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 DCTN6O00399 190 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 PTP4A3O75365 173 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 H2AFXP16104 143 aaPredicted RBP13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 ZNF12P17014 697 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 KITLGP21583 273 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 TNFSF4P23510 183 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 GATA3P23771 443 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 CD80P33681 288 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 CDKN2AP42771 156 aaKnown RBP13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 GSK3BP49841 420 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 MMP16P51512 607 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 FXYD6P3P58550 94 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 GUCY1A3Q02108 690 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 SCRN3Q0VDG4 424 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 BAMBIQ13145 260 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 SEC23BQ15437 767 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 CBLL1Q75N03 491 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 SYT9Q86SS6 491 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 OR52J3Q8NH60 311 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 OR1F12Q8NHA8 337 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 FNDC8Q8TC99 324 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 SLC7A13Q8TCU3 470 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 GPA33Q99795 319 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 NUAK2Q9H093 628 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 VIPAS39Q9H9C1 493 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 GCM1Q9NP62 436 aa13.34□□□□□ -0.27
ERGIC3-217ENST00000488935 F5H0A9 414 aaPredicted RBP13.33□□□□□ -0.28
ERGIC3-217ENST00000488935 F5H5P2 479 aa13.33□□□□□ -0.28
ERGIC3-217ENST00000488935 H3BSA7 217 aa13.33□□□□□ -0.28
ERGIC3-217ENST00000488935 TMPRSS2O15393 492 aa13.33□□□□□ -0.28
ERGIC3-217ENST00000488935 KHDRBS3O75525 346 aaKnown RBP13.33□□□□□ -0.28
ERGIC3-217ENST00000488935 HLA-DPB1P04440 258 aa13.33□□□□□ -0.28
ERGIC3-217ENST00000488935 HKR1P10072 659 aa13.33□□□□□ -0.28
ERGIC3-217ENST00000488935 COX5BP10606 129 aa13.33□□□□□ -0.28
ERGIC3-217ENST00000488935 COX4I1P13073 169 aa13.33□□□□□ -0.28
ERGIC3-217ENST00000488935 TNFRSF1AP19438 455 aa13.33□□□□□ -0.28
ERGIC3-217ENST00000488935 PMELP40967 661 aa13.33□□□□□ -0.28
ERGIC3-217ENST00000488935 ZMAT1Q5H9K5 638 aa13.33□□□□□ -0.28
ERGIC3-217ENST00000488935 FGD3Q5JSP0 725 aa13.33□□□□□ -0.28
ERGIC3-217ENST00000488935 RBMS3Q6XE24 437 aaKnown RBP13.33□□□□□ -0.28
ERGIC3-217ENST00000488935 TMPRSS11FQ6ZWK6 438 aa13.33□□□□□ -0.28
ERGIC3-217ENST00000488935 RRM2BQ7LG56 351 aa13.33□□□□□ -0.28
ERGIC3-217ENST00000488935 NAA40Q86UY6 237 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms