RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 PTP4A1Q93096 173 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 ASB9Q96DX5 294 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 SYT3Q9BQG1 590 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 BPESC1Q9GZL8 116 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 NUAK2Q9H093 628 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 SYT4Q9H2B2 425 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 OR52D1Q9H346 318 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 MYEF2Q9P2K5 600 aaKnown RBP5.98□□□□□ -1.45
VPS50-218ENST00000485994 ZDHHC8Q9ULC8 765 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 B9D1Q9UPM9 204 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 COA3Q9Y2R0 106 aaPredicted RBP5.98□□□□□ -1.45
VPS50-218ENST00000485994 LYVE1Q9Y5Y7 322 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 DYSFO75923 2080 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 IGLV1-36A0A0B4J1U3 117 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 OR6C6A6NF89 314 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 TNFRSF11BO00300 401 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 ACOT8O14734 319 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 OR10H3O60404 316 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 RP2O75695 350 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 NGFP01138 241 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 GASTP01350 101 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 CD55P08174 381 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 FAM157BP0CG42 384 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 FAM157CP0CG43 387 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 HIST1H1CP16403 213 aaKnown RBP5.97□□□□□ -1.45
VPS50-218ENST00000485994 GSTM3P21266 225 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 KITLGP21583 273 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 GCH1P30793 250 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 ALDH3B1P43353 468 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 PPP1CBP62140 327 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 MXRA7P84157 204 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 SPIBQ01892 262 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 GLO1Q04760 184 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 GGTLC2Q14390 218 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 NKPD1Q17RQ9 610 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 MICAQ29983 383 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 RSPO1Q2MKA7 263 aaPredicted RBP5.97□□□□□ -1.45
VPS50-218ENST00000485994 CHRFAM7AQ494W8 412 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 SLC36A3Q495N2 470 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 CCDC92Q53HC0 331 aaPredicted RBP5.97□□□□□ -1.45
VPS50-218ENST00000485994 OR2T5Q6IEZ7 315 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 FAM166AQ6J272 317 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 PGBD2Q6P3X8 592 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 RINLQ6ZS11 566 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 COLCA1Q6ZS62 124 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 MEX3DQ86XN8 651 aaKnown RBP5.97□□□□□ -1.45
VPS50-218ENST00000485994 OR6V1Q8N148 313 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 NPEPL1Q8NDH3 523 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 OR4C15Q8NGM1 316 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 OR2T29Q8NH02 315 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 AKR7LQ8NHP1 331 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 BCAS4Q8TDM0 211 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 SNX33Q8WV41 574 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 RASD2Q96D21 266 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 HAVCR1Q96D42 359 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 MSI2Q96DH6 328 aaKnown RBP5.97□□□□□ -1.45
VPS50-218ENST00000485994 ERMAPQ96PL5 475 aaPredicted RBP5.97□□□□□ -1.45
VPS50-218ENST00000485994 DGCR6LQ9BY27 220 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 OR2J1Q9GZK6 312 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 KCNG2Q9UJ96 466 aa5.97□□□□□ -1.45
VPS50-218ENST00000485994 FBN1P35555 2871 aaKnown RBP5.96□□□□□ -1.46
VPS50-218ENST00000485994 ARHGAP32A7KAX9 2087 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 LOC100289279A0A1B0GTE1 492 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 A0A1B0GWJ7 208 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 A0A1W2PPL8 197 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 A0A1W2PPW3 197 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 ARRDC5A6NEK1 342 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 AQP12BA6NM10 295 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 B4DSR2 109 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 H7C1C5 153 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 DCTN6O00399 190 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 BHLHE40O14503 412 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 PPP1R3DO95685 299 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 RENP00797 406 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 TGFAP01135 160 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 TFP02787 698 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 RAP2AP10114 183 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 GAAP10253 952 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 NAT2P11245 290 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 ANPEPP15144 967 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 RAC2P15153 192 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 CCNOP22674 350 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 CPT2P23786 658 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 MPV17P39210 176 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 GPR6P46095 362 aaPredicted RBP5.96□□□□□ -1.46
VPS50-218ENST00000485994 CENPAP49450 140 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 ZNF81P51508 661 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 CDH15P55291 814 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 ERVS71-1P61550 626 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 LMO4P61968 165 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 LCN6P62502 163 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 SLC3A1Q07837 685 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 ECH1Q13011 328 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 PSG7Q13046 419 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 CDK5R2Q13319 367 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 MAD2L1BPQ15013 274 aaPredicted RBP5.96□□□□□ -1.46
VPS50-218ENST00000485994 KRTAP27-1Q3LI81 207 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 FAM98BQ52LJ0 330 aaKnown RBP5.96□□□□□ -1.46
VPS50-218ENST00000485994 ZMAT1Q5H9K5 638 aa5.96□□□□□ -1.46
VPS50-218ENST00000485994 CYP2R1Q6VVX0 501 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms