RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 B3GAT2Q9NPZ5 323 aa14.86□□□□□ -0.03
VIM-205ENST00000485947 CHCHD3Q9NX63 227 aaKnown RBP14.86□□□□□ -0.03
VIM-205ENST00000485947 AMDHD2Q9Y303 409 aa14.86□□□□□ -0.03
VIM-205ENST00000485947 SLC25A15Q9Y619 301 aa14.86□□□□□ -0.03
VIM-205ENST00000485947 DSCAMO60469 2012 aa14.86□□□□□ -0.03
VIM-205ENST00000485947 DPRXA6NFQ7 191 aa14.85□□□□□ -0.03
VIM-205ENST00000485947 J3QRE1 110 aa14.85□□□□□ -0.03
VIM-205ENST00000485947 RAD51DO75771 328 aa14.85□□□□□ -0.03
VIM-205ENST00000485947 PLAUP00749 431 aa14.85□□□□□ -0.03
VIM-205ENST00000485947 TFAP2AP05549 437 aa14.85□□□□□ -0.03
VIM-205ENST00000485947 JUNBP17275 347 aaPredicted RBP14.85□□□□□ -0.03
VIM-205ENST00000485947 PCMT1P22061 227 aa14.85□□□□□ -0.03
VIM-205ENST00000485947 C21orf33P30042 268 aaPredicted RBP14.85□□□□□ -0.03
VIM-205ENST00000485947 PTH2RP49190 550 aa14.85□□□□□ -0.03
VIM-205ENST00000485947 SELENOPP49908 381 aa14.85□□□□□ -0.03
VIM-205ENST00000485947 C10orf128Q5T292 105 aa14.85□□□□□ -0.03
VIM-205ENST00000485947 CARD17Q5XLA6 110 aa14.85□□□□□ -0.03
VIM-205ENST00000485947 SLC25A47Q6Q0C1 308 aa14.85□□□□□ -0.03
VIM-205ENST00000485947 OR4F15Q8NGB8 312 aa14.85□□□□□ -0.03
VIM-205ENST00000485947 OR51L1Q8NGJ5 315 aa14.85□□□□□ -0.03
VIM-205ENST00000485947 LILRB1Q8NHL6 650 aaPredicted RBP14.85□□□□□ -0.03
VIM-205ENST00000485947 ZNRF4Q8WWF5 429 aa14.85□□□□□ -0.03
VIM-205ENST00000485947 TRMT61AQ96FX7 289 aaKnown RBP14.85□□□□□ -0.03
VIM-205ENST00000485947 LINC00470Q9BZP3 86 aa14.85□□□□□ -0.03
VIM-205ENST00000485947 BATF3Q9NR55 127 aa14.85□□□□□ -0.03
VIM-205ENST00000485947 SLC7A10Q9NS82 523 aa14.85□□□□□ -0.03
VIM-205ENST00000485947 ERGIC3Q9Y282 383 aa14.85□□□□□ -0.03
VIM-205ENST00000485947 ALPK2Q86TB3 2170 aa14.85□□□□□ -0.03
VIM-205ENST00000485947 OVOL3O00110 214 aa14.84□□□□□ -0.03
VIM-205ENST00000485947 IGHV3-9P01782 118 aa14.84□□□□□ -0.03
VIM-205ENST00000485947 ITGA5P08648 1049 aa14.84□□□□□ -0.03
VIM-205ENST00000485947 OR2T7P0C7T2 308 aa14.84□□□□□ -0.03
VIM-205ENST00000485947 DANCRP0C864 163 aa14.84□□□□□ -0.03
VIM-205ENST00000485947 HOXB1P14653 301 aaPredicted RBP14.84□□□□□ -0.03
VIM-205ENST00000485947 EMX1Q04741 257 aaPredicted RBP14.84□□□□□ -0.03
VIM-205ENST00000485947 FMODQ06828 376 aa14.84□□□□□ -0.03
VIM-205ENST00000485947 TSPO2Q5TGU0 170 aa14.84□□□□□ -0.03
VIM-205ENST00000485947 ALKBH2Q6NS38 261 aa14.84□□□□□ -0.03
VIM-205ENST00000485947 B3GLCTQ6Y288 498 aa14.84□□□□□ -0.03
VIM-205ENST00000485947 SLC16A9Q7RTY1 509 aa14.84□□□□□ -0.03
VIM-205ENST00000485947 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.84□□□□□ -0.03
VIM-205ENST00000485947 TIGD4Q8IY51 512 aa14.84□□□□□ -0.03
VIM-205ENST00000485947 ACBD7Q8N6N7 88 aa14.84□□□□□ -0.03
VIM-205ENST00000485947 OR2T27Q8NH04 317 aa14.84□□□□□ -0.03
VIM-205ENST00000485947 SMAP2Q8WU79 429 aaPredicted RBP14.84□□□□□ -0.03
VIM-205ENST00000485947 MCHR2Q969V1 340 aa14.84□□□□□ -0.03
VIM-205ENST00000485947 INTS14Q96SY0 518 aa14.84□□□□□ -0.03
VIM-205ENST00000485947 MND1Q9BWT6 205 aa14.84□□□□□ -0.03
VIM-205ENST00000485947 YIPF3Q9GZM5 350 aa14.84□□□□□ -0.03
VIM-205ENST00000485947 RERGLQ9H628 205 aa14.84□□□□□ -0.03
VIM-205ENST00000485947 ACOT13Q9NPJ3 140 aa14.84□□□□□ -0.03
VIM-205ENST00000485947 COA3Q9Y2R0 106 aaPredicted RBP14.84□□□□□ -0.03
VIM-205ENST00000485947 TMEM129A0AVI4 362 aa14.83□□□□□ -0.04
VIM-205ENST00000485947 C12orf71A8MTZ7 269 aa14.83□□□□□ -0.04
VIM-205ENST00000485947 MYL12BO14950 172 aa14.83□□□□□ -0.04
VIM-205ENST00000485947 APOL3O95236 402 aa14.83□□□□□ -0.04
VIM-205ENST00000485947 WNT11O96014 354 aa14.83□□□□□ -0.04
VIM-205ENST00000485947 MRPL3P09001 348 aaKnown RBP14.83□□□□□ -0.04
VIM-205ENST00000485947 QDPRP09417 244 aa14.83□□□□□ -0.04
VIM-205ENST00000485947 INHBBP09529 407 aa14.83□□□□□ -0.04
VIM-205ENST00000485947 LAP3P28838 519 aa14.83□□□□□ -0.04
VIM-205ENST00000485947 ALDH3B2P48448 385 aa14.83□□□□□ -0.04
VIM-205ENST00000485947 SH3BGRP55822 239 aaPredicted RBP14.83□□□□□ -0.04
VIM-205ENST00000485947 HSF2Q03933 536 aa14.83□□□□□ -0.04
VIM-205ENST00000485947 XAF1Q6GPH4 301 aa14.83□□□□□ -0.04
VIM-205ENST00000485947 SHFQ7M4L6 423 aa14.83□□□□□ -0.04
VIM-205ENST00000485947 GLB1L2Q8IW92 636 aa14.83□□□□□ -0.04
VIM-205ENST00000485947 SLC35F2Q8IXU6 374 aa14.83□□□□□ -0.04
VIM-205ENST00000485947 GPR137CQ8N3F9 429 aa14.83□□□□□ -0.04
VIM-205ENST00000485947 PERPQ96FX8 193 aa14.83□□□□□ -0.04
VIM-205ENST00000485947 MRPL48Q96GC5 212 aaKnown RBP14.83□□□□□ -0.04
VIM-205ENST00000485947 ULBP2Q9BZM5 246 aa14.83□□□□□ -0.04
VIM-205ENST00000485947 SLC17A5Q9NRA2 495 aa14.83□□□□□ -0.04
VIM-205ENST00000485947 CISD1Q9NZ45 108 aaKnown RBP14.83□□□□□ -0.04
VIM-205ENST00000485947 TMEM14AQ9Y6G1 99 aa14.83□□□□□ -0.04
VIM-205ENST00000485947 PRR14LQ5THK1 2151 aa14.83□□□□□ -0.04
VIM-205ENST00000485947 IGKV1D-43A0A0B4J1Z2 117 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 ZNF587BE7ETH6 402 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 PHYHO14832 338 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 DHHO43323 396 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 KRT33AO76009 404 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 HLA-DQA2P01906 255 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 TFP02787 698 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 GAAP10253 952 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 TTKP33981 857 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 NAA10P41227 235 aaPredicted RBP14.82□□□□□ -0.04
VIM-205ENST00000485947 MAP2K4P45985 399 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 ZNF84P51523 738 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 GALEQ14376 348 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 UBE2UQ5VVX9 321 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 LRFN4Q6PJG9 635 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 KLHL24Q6TFL4 600 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 FOXL2NBQ6ZUU3 175 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 ZNF367Q7RTV3 350 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 DTX2Q86UW9 622 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 EGFL6Q8IUX8 553 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 ERI1Q8IV48 349 aaKnown RBP14.82□□□□□ -0.04
VIM-205ENST00000485947 NANOGP1Q8N7R0 232 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 ZNF511Q8NB15 262 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 SLC26A10Q8NG04 563 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms