RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 B4GALT1P15291 398 aa12.54□□□□□ -0.4
USP11-207ENST00000478596 MPGP29372 298 aa12.54□□□□□ -0.4
USP11-207ENST00000478596 PYCR1P32322 319 aa12.54□□□□□ -0.4
USP11-207ENST00000478596 NTF4P34130 210 aa12.54□□□□□ -0.4
USP11-207ENST00000478596 HILS1P60008 231 aa12.54□□□□□ -0.4
USP11-207ENST00000478596 SCGB2A2Q13296 93 aa12.54□□□□□ -0.4
USP11-207ENST00000478596 STK11Q15831 433 aa12.54□□□□□ -0.4
USP11-207ENST00000478596 PHYHD1Q5SRE7 291 aa12.54□□□□□ -0.4
USP11-207ENST00000478596 SSX8Q7RTT4 187 aa12.54□□□□□ -0.4
USP11-207ENST00000478596 CPOQ8IVL8 374 aa12.54□□□□□ -0.4
USP11-207ENST00000478596 GID4Q8IVV7 300 aa12.54□□□□□ -0.4
USP11-207ENST00000478596 OR8J1Q8NGP2 316 aa12.54□□□□□ -0.4
USP11-207ENST00000478596 MCHR2Q969V1 340 aa12.54□□□□□ -0.4
USP11-207ENST00000478596 SNX18Q96RF0 628 aa12.54□□□□□ -0.4
USP11-207ENST00000478596 NUAK2Q9H093 628 aa12.54□□□□□ -0.4
USP11-207ENST00000478596 SRA1Q9HD15 236 aaKnown RBP12.54□□□□□ -0.4
USP11-207ENST00000478596 CLN6Q9NWW5 311 aa12.54□□□□□ -0.4
USP11-207ENST00000478596 TAS2R16Q9NYV7 291 aa12.54□□□□□ -0.4
USP11-207ENST00000478596 DNAJC27Q9NZQ0 273 aa12.54□□□□□ -0.4
USP11-207ENST00000478596 VSX1Q9NZR4 365 aaPredicted RBP12.54□□□□□ -0.4
USP11-207ENST00000478596 OR6C68A6NDL8 312 aa12.53□□□□□ -0.4
USP11-207ENST00000478596 H0YAE9 185 aa12.53□□□□□ -0.4
USP11-207ENST00000478596 CTLA4P16410 223 aa12.53□□□□□ -0.4
USP11-207ENST00000478596 SPI1P17947 270 aa12.53□□□□□ -0.4
USP11-207ENST00000478596 GLO1Q04760 184 aa12.53□□□□□ -0.4
USP11-207ENST00000478596 IL18R1Q13478 541 aa12.53□□□□□ -0.4
USP11-207ENST00000478596 SGCAQ16586 387 aa12.53□□□□□ -0.4
USP11-207ENST00000478596 KRT80Q6KB66 452 aa12.53□□□□□ -0.4
USP11-207ENST00000478596 ZNF813Q6ZN06 617 aa12.53□□□□□ -0.4
USP11-207ENST00000478596 BHLHA15Q7RTS1 189 aaPredicted RBP12.53□□□□□ -0.4
USP11-207ENST00000478596 NPEPL1Q8NDH3 523 aa12.53□□□□□ -0.4
USP11-207ENST00000478596 OR51L1Q8NGJ5 315 aa12.53□□□□□ -0.4
USP11-207ENST00000478596 TSSK2Q96PF2 358 aa12.53□□□□□ -0.4
USP11-207ENST00000478596 FOXB1Q99853 325 aa12.53□□□□□ -0.4
USP11-207ENST00000478596 MRPL13Q9BYD1 178 aaKnown RBP12.53□□□□□ -0.4
USP11-207ENST00000478596 KCNN2Q9H2S1 579 aa12.53□□□□□ -0.4
USP11-207ENST00000478596 METTL17Q9H7H0 456 aaPredicted RBP12.53□□□□□ -0.4
USP11-207ENST00000478596 HINT3Q9NQE9 182 aaKnown RBP12.53□□□□□ -0.4
USP11-207ENST00000478596 NDRG4Q9ULP0 352 aaKnown RBP12.53□□□□□ -0.4
USP11-207ENST00000478596 FKBP7Q9Y680 259 aa12.53□□□□□ -0.4
USP11-207ENST00000478596 LOC390937A0A1W2PQ73 354 aa12.52□□□□□ -0.41
USP11-207ENST00000478596 SNTNA6NMZ2 147 aa12.52□□□□□ -0.41
USP11-207ENST00000478596 ZNF99A8MXY4 864 aaPredicted RBP12.52□□□□□ -0.41
USP11-207ENST00000478596 DLGAP1O14490 977 aa12.52□□□□□ -0.41
USP11-207ENST00000478596 SLC16A6O15403 523 aa12.52□□□□□ -0.41
USP11-207ENST00000478596 ALX3O95076 343 aa12.52□□□□□ -0.41
USP11-207ENST00000478596 PCMT1P22061 227 aa12.52□□□□□ -0.41
USP11-207ENST00000478596 IGHV1-2P23083 117 aa12.52□□□□□ -0.41
USP11-207ENST00000478596 CDAP32320 146 aa12.52□□□□□ -0.41
USP11-207ENST00000478596 SLC25A1P53007 311 aa12.52□□□□□ -0.41
USP11-207ENST00000478596 UBE2NP61088 152 aaKnown RBP12.52□□□□□ -0.41
USP11-207ENST00000478596 ARF1P84077 181 aaKnown RBP12.52□□□□□ -0.41
USP11-207ENST00000478596 APOFQ13790 326 aa12.52□□□□□ -0.41
USP11-207ENST00000478596 PPA1Q15181 289 aa12.52□□□□□ -0.41
USP11-207ENST00000478596 OCLNQ16625 522 aa12.52□□□□□ -0.41
USP11-207ENST00000478596 ZNF691Q5VV52 312 aa12.52□□□□□ -0.41
USP11-207ENST00000478596 ZNF544Q6NX49 715 aa12.52□□□□□ -0.41
USP11-207ENST00000478596 NHLRC1Q6VVB1 395 aa12.52□□□□□ -0.41
USP11-207ENST00000478596 GLB1L2Q8IW92 636 aa12.52□□□□□ -0.41
USP11-207ENST00000478596 LINC01356Q8N9X3 169 aa12.52□□□□□ -0.41
USP11-207ENST00000478596 ZNF540Q8NDQ6 660 aa12.52□□□□□ -0.41
USP11-207ENST00000478596 BBS1Q8NFJ9 593 aa12.52□□□□□ -0.41
USP11-207ENST00000478596 RFKQ969G6 155 aa12.52□□□□□ -0.41
USP11-207ENST00000478596 CNBD2Q96M20 576 aa12.52□□□□□ -0.41
USP11-207ENST00000478596 RACGAP1Q9H0H5 632 aa12.52□□□□□ -0.41
USP11-207ENST00000478596 COA3Q9Y2R0 106 aaPredicted RBP12.52□□□□□ -0.41
USP11-207ENST00000478596 WNK1Q9H4A3 2382 aa12.52□□□□□ -0.41
USP11-207ENST00000478596 PLCE1Q9P212 2302 aa12.51□□□□□ -0.41
USP11-207ENST00000478596 A0A096LPE4 126 aa12.51□□□□□ -0.41
USP11-207ENST00000478596 A0A1W2PPZ6 126 aa12.51□□□□□ -0.41
USP11-207ENST00000478596 PRODHO43272 600 aa12.51□□□□□ -0.41
USP11-207ENST00000478596 ITGA5P08648 1049 aa12.51□□□□□ -0.41
USP11-207ENST00000478596 CLUP10909 449 aa12.51□□□□□ -0.41
USP11-207ENST00000478596 COX5AP20674 150 aa12.51□□□□□ -0.41
USP11-207ENST00000478596 MSR1P21757 451 aa12.51□□□□□ -0.41
USP11-207ENST00000478596 FMO3P31513 532 aa12.51□□□□□ -0.41
USP11-207ENST00000478596 ATP6V1E1P36543 226 aa12.51□□□□□ -0.41
USP11-207ENST00000478596 FABP6P51161 128 aa12.51□□□□□ -0.41
USP11-207ENST00000478596 ADARB1P78563 741 aaKnown RBP12.51□□□□□ -0.41
USP11-207ENST00000478596 HIST3H3Q16695 136 aa12.51□□□□□ -0.41
USP11-207ENST00000478596 C10orf128Q5T292 105 aa12.51□□□□□ -0.41
USP11-207ENST00000478596 LINGO2Q7L985 606 aa12.51□□□□□ -0.41
USP11-207ENST00000478596 ENTHD1Q8IYW4 607 aa12.51□□□□□ -0.41
USP11-207ENST00000478596 OR1K1Q8NGR3 316 aa12.51□□□□□ -0.41
USP11-207ENST00000478596 HPS1Q92902 700 aa12.51□□□□□ -0.41
USP11-207ENST00000478596 Q96MT0 163 aa12.51□□□□□ -0.41
USP11-207ENST00000478596 MUS81Q96NY9 551 aa12.51□□□□□ -0.41
USP11-207ENST00000478596 MYOZ1Q9NP98 299 aaPredicted RBP12.51□□□□□ -0.41
USP11-207ENST00000478596 CCNB1IP1Q9NPC3 277 aa12.51□□□□□ -0.41
USP11-207ENST00000478596 NPAP1Q9NZP6 1156 aa12.51□□□□□ -0.41
USP11-207ENST00000478596 RAB26Q9ULW5 256 aa12.51□□□□□ -0.41
USP11-207ENST00000478596 PCDHB10Q9UN67 800 aa12.51□□□□□ -0.41
USP11-207ENST00000478596 B9D1Q9UPM9 204 aa12.51□□□□□ -0.41
USP11-207ENST00000478596 PMF1-BGLAPU3KQ54 211 aa12.51□□□□□ -0.41
USP11-207ENST00000478596 IGKV1D-43A0A0B4J1Z2 117 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 TVP23AA6NH52 213 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 SLC22A31A6NKX4 558 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 RPL36A-HNRNPH2H7BZ11 118 aa12.5□□□□□ -0.41
USP11-207ENST00000478596 MRPL3P09001 348 aaKnown RBP12.5□□□□□ -0.41
USP11-207ENST00000478596 GNAO1P09471 354 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms