RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 RHPN2P1A8MT19 583 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 A8MVM7 634 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 A8MXE2 369 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 H7C4K7 107 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 OVOL3O00110 214 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 CLDN7O95471 211 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 PSMB6P28072 239 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 GABRR2P28476 465 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 TAS2R50P59544 299 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 TUSC3Q13454 348 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 DMC1Q14565 340 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 TGIF1Q15583 401 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 ZNF141Q15928 474 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 TMEM249Q2WGJ8 235 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 ELOA3BQ3SY89 546 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 Q499Y3 187 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 CLLU1OSQ5K130 101 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 OR10K2Q6IF99 312 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 CDC73Q6P1J9 531 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 FCRLAQ7L513 359 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 TGIF2LYQ8IUE0 185 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 TMEM156Q8N614 296 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 STEAP2Q8NFT2 490 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 ELOA3Q8NG57 546 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 ZNF519Q8TB69 540 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 FBXO17Q96EF6 278 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 HHIPL1Q96JK4 782 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 OR7D2Q96RA2 312 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 LMF2Q9BU23 707 aaKnown RBP3.65□□□□□ -1.83
USP16-205ENST00000474835 MAGT1Q9H0U3 335 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 OR51V1Q9H2C8 321 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 TBC1D17Q9HA65 648 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 IL21Q9HBE4 155 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 YIPF1Q9Y548 306 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 B3GALT1Q9Y5Z6 326 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 TRANK1O15050 2925 aa3.65□□□□□ -1.83
USP16-205ENST00000474835 A0A087WV62 115 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 KHDRBS3O75525 346 aaKnown RBP3.64□□□□□ -1.83
USP16-205ENST00000474835 ZNF432O94892 652 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 CST4P01036 141 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 GCGP01275 180 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 TK1P04183 234 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 PTHLHP12272 177 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 ZNF17P17021 662 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 HTR2CP28335 458 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 BRS3P32247 399 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 TM4SF4P48230 202 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 TBPL1P62380 186 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 ST3GAL3Q11203 375 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 ANKRD55Q3KP44 614 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 STEAP1BQ6NZ63 245 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 KLHL24Q6TFL4 600 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 GLB1LQ6UWU2 654 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 LRRN1Q6UXK5 716 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 DEF8Q6ZN54 512 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 ZFP82Q8N141 532 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 RYBPQ8N488 228 aaPredicted RBP3.64□□□□□ -1.83
USP16-205ENST00000474835 DTWD2Q8NBA8 298 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 ADAD2Q8NCV1 583 aaKnown RBP3.64□□□□□ -1.83
USP16-205ENST00000474835 RCBTB1Q8NDN9 531 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 OR6J1Q8NGC5 347 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 OR51D1Q8NGF3 324 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 OR4D5Q8NGN0 318 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 PIGKQ92643 395 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 CLP1Q92989 425 aaKnown RBP3.64□□□□□ -1.83
USP16-205ENST00000474835 LMF1Q96S06 567 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 RASL10BQ96S79 203 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 ZNF587Q96SQ5 575 aaPredicted RBP3.64□□□□□ -1.83
USP16-205ENST00000474835 CNN2Q99439 309 aaKnown RBP3.64□□□□□ -1.83
USP16-205ENST00000474835 CD180Q99467 661 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 ANGPTL4Q9BY76 406 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 HDHD2Q9H0R4 259 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 ZFYVE1Q9HBF4 777 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 EXOSC4Q9NPD3 245 aaKnown RBP3.64□□□□□ -1.83
USP16-205ENST00000474835 KRCC1Q9NPI7 259 aaPredicted RBP3.64□□□□□ -1.83
USP16-205ENST00000474835 G6PC2Q9NQR9 355 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 FAM86C1Q9NVL1 165 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 IL36AQ9UHA7 158 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 SMPXQ9UHP9 88 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 HIF3AQ9Y2N7 669 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 MRPS18BQ9Y676 258 aaKnown RBP3.64□□□□□ -1.83
USP16-205ENST00000474835 CHD3Q12873 2000 aaKnown RBP3.64□□□□□ -1.83
USP16-205ENST00000474835 A0A1B0GU03 582 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 SSNA1O43805 119 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 OR10H3O60404 316 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 SFT2D2O95562 160 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 SNRPCP09234 159 aaKnown RBP3.64□□□□□ -1.83
USP16-205ENST00000474835 LINC00271P0C7V0 271 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 TPT1P13693 172 aaKnown RBP3.64□□□□□ -1.83
USP16-205ENST00000474835 HMGB2P26583 209 aaKnown RBP3.64□□□□□ -1.83
USP16-205ENST00000474835 PEBP1P30086 187 aaKnown RBP3.64□□□□□ -1.83
USP16-205ENST00000474835 CD80P33681 288 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 GALNSP34059 522 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 CCR5P51681 352 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 CHAF1BQ13112 559 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 TAF1CQ15572 869 aaPredicted RBP3.64□□□□□ -1.83
USP16-205ENST00000474835 MOGAT2Q3SYC2 334 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 SLC48A1Q6P1K1 146 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 NRSN1Q8IZ57 195 aa3.64□□□□□ -1.83
USP16-205ENST00000474835 TMEM104Q8NE00 496 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms