RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 KLF10Q13118 480 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 CCDC92Q53HC0 331 aaPredicted RBP10.28□□□□□ -0.76
HDAC3-204ENST00000469207 MESTQ5EB52 335 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 OR2T2Q6IF00 324 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 ARL9Q6T311 187 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 TREML4Q6UXN2 200 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 SYT9Q86SS6 491 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 C1orf174Q8IYL3 243 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 ATG16L2Q8NAA4 619 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 OR10AD1Q8NGE0 317 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 OR8J3Q8NGG0 315 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 OR52E2Q8NGJ4 325 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 PTP4A1Q93096 173 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 PRRC1Q96M27 445 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 GPA33Q99795 319 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 SH3GL1Q99961 368 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 TMEM120AQ9BXJ8 343 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 TNFRSF19Q9NS68 423 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 PTTG3PQ9NZH4 202 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 CGGBP1Q9UFW8 167 aaPredicted RBP10.28□□□□□ -0.76
HDAC3-204ENST00000469207 IL20RAQ9UHF4 553 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 NDRG4Q9ULP0 352 aaKnown RBP10.28□□□□□ -0.76
HDAC3-204ENST00000469207 COA3Q9Y2R0 106 aaPredicted RBP10.28□□□□□ -0.76
HDAC3-204ENST00000469207 A8MXK9 166 aa10.27□□□□□ -0.77
HDAC3-204ENST00000469207 H3BSA7 217 aa10.27□□□□□ -0.77
HDAC3-204ENST00000469207 RER1O15258 196 aa10.27□□□□□ -0.77
HDAC3-204ENST00000469207 RNASE1P07998 156 aaKnown RBP10.27□□□□□ -0.77
HDAC3-204ENST00000469207 COX5BP10606 129 aa10.27□□□□□ -0.77
HDAC3-204ENST00000469207 NR2C1P13056 603 aa10.27□□□□□ -0.77
HDAC3-204ENST00000469207 GSTM3P21266 225 aa10.27□□□□□ -0.77
HDAC3-204ENST00000469207 TNFSF4P23510 183 aa10.27□□□□□ -0.77
HDAC3-204ENST00000469207 RPL4P36578 427 aaKnown RBP10.27□□□□□ -0.77
HDAC3-204ENST00000469207 PMELP40967 661 aa10.27□□□□□ -0.77
HDAC3-204ENST00000469207 MMP16P51512 607 aa10.27□□□□□ -0.77
HDAC3-204ENST00000469207 ESCO2Q56NI9 601 aa10.27□□□□□ -0.77
HDAC3-204ENST00000469207 ZMAT1Q5H9K5 638 aa10.27□□□□□ -0.77
HDAC3-204ENST00000469207 METTL21CQ5VZV1 264 aa10.27□□□□□ -0.77
HDAC3-204ENST00000469207 ZER1Q7Z7L7 766 aa10.27□□□□□ -0.77
HDAC3-204ENST00000469207 PARP8Q8N3A8 854 aa10.27□□□□□ -0.77
HDAC3-204ENST00000469207 POU5F2Q8N7G0 328 aa10.27□□□□□ -0.77
HDAC3-204ENST00000469207 C19orf18Q8NEA5 215 aa10.27□□□□□ -0.77
HDAC3-204ENST00000469207 STON2Q8WXE9 905 aa10.27□□□□□ -0.77
HDAC3-204ENST00000469207 RASD2Q96D21 266 aa10.27□□□□□ -0.77
HDAC3-204ENST00000469207 MRI1Q9BV20 369 aa10.27□□□□□ -0.77
HDAC3-204ENST00000469207 FNDC11Q9BVV2 318 aa10.27□□□□□ -0.77
HDAC3-204ENST00000469207 WDR76Q9H967 626 aa10.27□□□□□ -0.77
HDAC3-204ENST00000469207 CMTM6Q9NX76 183 aa10.27□□□□□ -0.77
HDAC3-204ENST00000469207 GRHPRQ9UBQ7 328 aa10.27□□□□□ -0.77
HDAC3-204ENST00000469207 GMNCA6NCL1 334 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 A6NIZ1 184 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 FAM220BPB1ANY3 271 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 F5H5P2 479 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 SLC16A7O60669 478 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 IFNA14P01570 189 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 HLA-DPB1P04440 258 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 VIMP08670 466 aaKnown RBP10.26□□□□□ -0.77
HDAC3-204ENST00000469207 MDH2P40926 338 aaKnown RBP10.26□□□□□ -0.77
HDAC3-204ENST00000469207 RAP1BP61224 184 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 RAP1AP62834 184 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 GUCY1A3Q02108 690 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 SCRN3Q0VDG4 424 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 TRAM2Q15035 370 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 MEP1BQ16820 701 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 ERICH5Q6P6B1 374 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 LYPD2Q6UXB3 125 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 BRD3OSQ6XYD6 125 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 ZNF730Q6ZMV8 503 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 FAM122BQ7Z309 247 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 TSEN54Q7Z6J9 526 aaKnown RBP10.26□□□□□ -0.77
HDAC3-204ENST00000469207 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.26□□□□□ -0.77
HDAC3-204ENST00000469207 KLBQ86Z14 1044 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 OR2T12Q8NG77 320 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 OR1F12Q8NHA8 337 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 FNDC8Q8TC99 324 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 SLC25A28Q96A46 364 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 MEGF10Q96KG7 1140 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 TSSK2Q96PF2 358 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 TMEM246Q9BRR3 403 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 SSBP3Q9BWW4 388 aaPredicted RBP10.26□□□□□ -0.77
HDAC3-204ENST00000469207 SYT4Q9H2B2 425 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 SAR1AQ9NR31 198 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 ASH2LQ9UBL3 628 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 OR5V1Q9UGF6 321 aa10.26□□□□□ -0.77
HDAC3-204ENST00000469207 TRAV40A0A0B4J280 105 aa10.25□□□□□ -0.77
HDAC3-204ENST00000469207 TEX13CA0A0J9YWL9 993 aa10.25□□□□□ -0.77
HDAC3-204ENST00000469207 ELOVL7A1L3X0 281 aa10.25□□□□□ -0.77
HDAC3-204ENST00000469207 PRSS37A4D1T9 235 aa10.25□□□□□ -0.77
HDAC3-204ENST00000469207 OR6C6A6NF89 314 aa10.25□□□□□ -0.77
HDAC3-204ENST00000469207 MLNRO43193 412 aa10.25□□□□□ -0.77
HDAC3-204ENST00000469207 HOXA3O43365 443 aaPredicted RBP10.25□□□□□ -0.77
HDAC3-204ENST00000469207 PTP4A3O75365 173 aa10.25□□□□□ -0.77
HDAC3-204ENST00000469207 CD14P08571 375 aa10.25□□□□□ -0.77
HDAC3-204ENST00000469207 RPS2P15880 293 aaKnown RBP10.25□□□□□ -0.77
HDAC3-204ENST00000469207 RSPO1Q2MKA7 263 aaPredicted RBP10.25□□□□□ -0.77
HDAC3-204ENST00000469207 DEFB112Q30KQ8 113 aa10.25□□□□□ -0.77
HDAC3-204ENST00000469207 ZBED5Q49AG3 693 aa10.25□□□□□ -0.77
HDAC3-204ENST00000469207 PDLIM3Q53GG5 364 aaPredicted RBP10.25□□□□□ -0.77
HDAC3-204ENST00000469207 FAM205BPQ63HN1 556 aa10.25□□□□□ -0.77
HDAC3-204ENST00000469207 CGB2Q6NT52 195 aa10.25□□□□□ -0.77
HDAC3-204ENST00000469207 SLC27A4Q6P1M0 643 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms