RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 TNRC18O15417 2968 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-207ENST00000468925 TDRD15B5MCY1 1934 aaKnown RBP4.38□□□□□ -1.71
SF3B1-207ENST00000468925 TRBV24-1A0A075B6N3 115 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 BORCS7-ASMTA0A0B4J1R7 106 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 TRAV39A0A0B4J263 110 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 KIR2DL5BA0A0G2JN68 375 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 KIR2DL5BA0A0G2JPC4 375 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 TRBV11-1A0A0K0K1C0 115 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 NKX6-3A6NJ46 265 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 RNF212BA8MTL3 300 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 UMAD1C9J7I0 102 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 M0R129 80 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 RAB27BO00194 218 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 FOXE1O00358 373 aaPredicted RBP4.38□□□□□ -1.71
SF3B1-207ENST00000468925 FFAR1O14842 300 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 HMGB3O15347 200 aaKnown RBP4.38□□□□□ -1.71
SF3B1-207ENST00000468925 TAPBPO15533 448 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 NUDT21O43809 227 aaKnown RBP4.38□□□□□ -1.71
SF3B1-207ENST00000468925 CDC40O60508 579 aaKnown RBP eCLIP4.38□□□□□ -1.71
SF3B1-207ENST00000468925 SRPX2O60687 465 aaPredicted RBP4.38□□□□□ -1.71
SF3B1-207ENST00000468925 HIST1H2BKO60814 126 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF821O75541 412 aaPredicted RBP4.38□□□□□ -1.71
SF3B1-207ENST00000468925 MMP23AO75900 390 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 NXPH2O95156 264 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 ZFPL1O95159 310 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 RCBTB2O95199 551 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 PCDH8O95206 1070 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 DUS4LO95620 317 aaKnown RBP4.38□□□□□ -1.71
SF3B1-207ENST00000468925 IFNA21P01568 189 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 PMP2P02689 132 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 HIST1H2BJP06899 126 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 MMP2P08253 660 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 TACSTD2P09758 323 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 OR2T7P0C7T2 308 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 RD3LP0DJH9 198 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 GZMBP10144 247 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 NR2F1P10589 423 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 LAMP1P11279 417 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 SRMP19623 302 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 MSR1P21757 451 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 HIST1H2BOP23527 126 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 MMP11P24347 488 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 DPP4P27487 766 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 HIST1H2BBP33778 126 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 PRSS3P35030 304 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 OR1E2P47887 323 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 SLC6A11P48066 632 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 CSNK1DP48730 415 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 PDLIM4P50479 330 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 LBX1P52954 281 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 CASP9P55211 416 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 HIST1H2BDP58876 126 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 HIST1H2BCP62807 126 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 RBX1P62877 108 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 HIST1H3AP68431 136 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF763Q0D2J5 394 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 DUSP8Q13202 625 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 RUNX2Q13950 521 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF235Q14590 738 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 SHHQ15465 462 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 TESK1Q15569 626 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 FAM189A2Q15884 450 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 HIST2H2BEQ16778 126 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.38□□□□□ -1.71
SF3B1-207ENST00000468925 PGGHGQ32M88 737 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 ACOT6Q3I5F7 207 aaPredicted RBP4.38□□□□□ -1.71
SF3B1-207ENST00000468925 C3orf36Q3SXR2 165 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 CRY2Q49AN0 593 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 KHDC3LQ587J8 217 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 CT83Q5H943 113 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 SOHLH1Q5JUK2 328 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 CTSL3PQ5NE16 218 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.38□□□□□ -1.71
SF3B1-207ENST00000468925 LY6G6FQ5SQ64 297 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 PHF19Q5T6S3 580 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 OR2T2Q6IF00 324 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 OR8G2PQ6IF36 304 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 OR2A2Q6IF42 318 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 STEAP1BQ6NZ63 245 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF585AQ6P3V2 769 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 PODNL1Q6PEZ8 512 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 DEGS2Q6QHC5 323 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 ARL9Q6T311 187 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 CLEC2AQ6UVW9 174 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 C16orf59Q7L2K0 433 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 NR2C2APQ86WQ0 139 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 TGIF2LYQ8IUE0 185 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 FOXRED2Q8IWF2 684 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 IZUMO1Q8IYV9 350 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 FAM185AQ8N0U4 392 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 KIR2DL5AQ8N109 375 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF664Q8N3J9 261 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 SLC35G3Q8N808 338 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 FRMD1Q8N878 549 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 SUMF2Q8NBJ7 301 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 SIDT2Q8NBJ9 832 aaKnown RBP4.38□□□□□ -1.71
SF3B1-207ENST00000468925 TMEM52Q8NDY8 209 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 CPEB3Q8NE35 698 aaKnown RBP4.38□□□□□ -1.71
SF3B1-207ENST00000468925 OR2M7Q8NG81 312 aa4.38□□□□□ -1.71
SF3B1-207ENST00000468925 OR6J1Q8NGC5 347 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms