RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 RRM2P31350 389 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 CRISP1P54107 249 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 PRRX1P54821 245 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 PRR3P79522 188 aaKnown RBP2.1□□□□□ -2.07
SMC4-205ENST00000465563 GBE1Q04446 702 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 LIPEQ05469 1076 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 TWF1Q12792 350 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 MAB21L1Q13394 359 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 ZSCAN26Q16670 478 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 COX19Q49B96 90 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 CT45A1Q5HYN5 189 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 PPM1LQ5SGD2 360 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 CCNJQ5T5M9 372 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 BIVMQ86UB2 503 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 PQLC3Q8N755 202 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 ZFP41Q8N8Y5 198 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 CT45A3Q8NHU0 189 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 TSEN15Q8WW01 171 aaKnown RBP2.1□□□□□ -2.07
SMC4-205ENST00000465563 MCUR1Q96AQ8 359 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 PARP12Q9H0J9 701 aaKnown RBP2.1□□□□□ -2.07
SMC4-205ENST00000465563 KCNJ16Q9NPI9 418 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 UXTQ9UBK9 157 aaPredicted RBP2.1□□□□□ -2.07
SMC4-205ENST00000465563 OR12D3Q9UGF7 316 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 ZNF229Q9UJW7 825 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 SLC17A4Q9Y2C5 497 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.1□□□□□ -2.07
SMC4-205ENST00000465563 ADAMTS13Q76LX8 1427 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 GPATCH8Q9UKJ3 1502 aaKnown RBP2.09□□□□□ -2.07
SMC4-205ENST00000465563 A0A075B6Q4 140 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 RPL36A-HNRNPH2H7BZ11 118 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 SGK1O00141 431 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 ZNF207O43670 478 aaKnown RBP2.09□□□□□ -2.07
SMC4-205ENST00000465563 CACNG3O60359 315 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 HMMRO75330 724 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 FABP3P05413 133 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 BCHEP06276 602 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 ACSM4P0C7M7 580 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 IGHV1-8P0DP01 117 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 CALM1P0DP23 149 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 CALM2P0DP24 149 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 CALM3P0DP25 149 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 ATF6P18850 670 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 CEACAM6P40199 344 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 CSNK1A1P48729 337 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 CX3CR1P49238 355 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 RAB9AP51151 201 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 ESRRGP62508 458 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 PRPSAP1Q14558 356 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 UBE2UQ5VVX9 321 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 ARL9Q6T311 187 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 TMEM205Q6UW68 189 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 BZW1Q7L1Q6 419 aaKnown RBP2.09□□□□□ -2.07
SMC4-205ENST00000465563 TMEM150AQ86TG1 271 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 OAFQ86UD1 273 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 UBALD2Q8IYN6 164 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 CMTM1Q8IZ96 169 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 NPWQ8N729 165 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 NUBPLQ8TB37 319 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 CAPSLQ8WWF8 208 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 C8orf44Q96CB5 159 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 OR5B12Q96R08 314 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 ANKRD60Q9BZ19 345 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 FAM192AQ9GZU8 254 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 C12orf10Q9HB07 376 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 TMED5Q9Y3A6 229 aa2.09□□□□□ -2.07
SMC4-205ENST00000465563 IGLV1-50A0A075B6I6 118 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 LYRM9A8MSI8 78 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 ZNF705GA8MUZ8 300 aaPredicted RBP2.08□□□□□ -2.08
SMC4-205ENST00000465563 SMKR1H3BMG3 65 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 GCM2O75603 506 aaPredicted RBP2.08□□□□□ -2.08
SMC4-205ENST00000465563 HLA-DPB1P04440 258 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 PGAM1P18669 254 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 RAB3BP20337 219 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 F2RP25116 425 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 STOMP27105 288 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 NAMPTP43490 491 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 MRPL19P49406 292 aaKnown RBP2.08□□□□□ -2.08
SMC4-205ENST00000465563 CSNK1EP49674 416 aaKnown RBP2.08□□□□□ -2.08
SMC4-205ENST00000465563 C21orf59P57076 290 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 RGS8P57771 180 aaPredicted RBP2.08□□□□□ -2.08
SMC4-205ENST00000465563 SP4Q02446 784 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 LOXL1Q08397 574 aaPredicted RBP2.08□□□□□ -2.08
SMC4-205ENST00000465563 SYCNQ0VAF6 134 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 ERCC8Q13216 396 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 RCN1Q15293 331 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 RGNQ15493 299 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 PTPN20Q4JDL3 420 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 NPSR1Q6W5P4 371 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 WDR86Q86TI4 376 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 CBLN2Q8IUK8 224 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 PGAM4Q8N0Y7 254 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 C11orf72Q8NBR9 251 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 OR10AD1Q8NGE0 317 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 OR5W2Q8NH69 310 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 SYNPRQ8TBG9 265 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 ABHD3Q8WU67 409 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 OR10C1Q96KK4 312 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 SLC25A2Q9BXI2 301 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 EXO5Q9H790 373 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 VPS37BQ9H9H4 285 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms