RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 TREM2Q9NZC2 230 aa16.09■□□□□ 0.17
COL5A1-203ENST00000460264 POLR1DQ9Y2S0 133 aa16.09■□□□□ 0.17
COL5A1-203ENST00000460264 CACNG2Q9Y698 323 aa16.09■□□□□ 0.17
COL5A1-203ENST00000460264 SVEP1Q4LDE5 3571 aa16.09■□□□□ 0.17
COL5A1-203ENST00000460264 B4DSR2 109 aa16.08■□□□□ 0.16
COL5A1-203ENST00000460264 FAM157AC9JC47 383 aa16.08■□□□□ 0.16
COL5A1-203ENST00000460264 RER1O15258 196 aa16.08■□□□□ 0.16
COL5A1-203ENST00000460264 PHF1O43189 567 aaPredicted RBP16.08■□□□□ 0.16
COL5A1-203ENST00000460264 KRT36O76013 467 aa16.08■□□□□ 0.16
COL5A1-203ENST00000460264 HIST1H1CP16403 213 aaKnown RBP16.08■□□□□ 0.16
COL5A1-203ENST00000460264 GSTM3P21266 225 aa16.08■□□□□ 0.16
COL5A1-203ENST00000460264 LIPAP38571 399 aa16.08■□□□□ 0.16
COL5A1-203ENST00000460264 MAGEA2P43356 314 aa16.08■□□□□ 0.16
COL5A1-203ENST00000460264 DVL1P1P54792 670 aaPredicted RBP16.08■□□□□ 0.16
COL5A1-203ENST00000460264 LMO4P61968 165 aa16.08■□□□□ 0.16
COL5A1-203ENST00000460264 TSPAN31Q12999 210 aa16.08■□□□□ 0.16
COL5A1-203ENST00000460264 CCDC92Q53HC0 331 aaPredicted RBP16.08■□□□□ 0.16
COL5A1-203ENST00000460264 ZMAT1Q5H9K5 638 aa16.08■□□□□ 0.16
COL5A1-203ENST00000460264 MTX3Q5HYI7 312 aa16.08■□□□□ 0.16
COL5A1-203ENST00000460264 PGM2L1Q6PCE3 622 aa16.08■□□□□ 0.16
COL5A1-203ENST00000460264 JAZF1Q86VZ6 243 aa16.08■□□□□ 0.16
COL5A1-203ENST00000460264 ARHGAP24Q8N264 748 aa16.08■□□□□ 0.16
COL5A1-203ENST00000460264 OR4K13Q8NH42 304 aa16.08■□□□□ 0.16
COL5A1-203ENST00000460264 OR1F12Q8NHA8 337 aa16.08■□□□□ 0.16
COL5A1-203ENST00000460264 GNPDA2Q8TDQ7 276 aa16.08■□□□□ 0.16
COL5A1-203ENST00000460264 NSL1Q96IY1 281 aa16.08■□□□□ 0.16
COL5A1-203ENST00000460264 NMNAT3Q96T66 252 aa16.08■□□□□ 0.16
COL5A1-203ENST00000460264 ATPIF1Q9UII2 106 aa16.08■□□□□ 0.16
COL5A1-203ENST00000460264 KLHL21Q9UJP4 597 aa16.08■□□□□ 0.16
COL5A1-203ENST00000460264 GRIP1Q9Y3R0 1128 aa16.08■□□□□ 0.16
COL5A1-203ENST00000460264 LYVE1Q9Y5Y7 322 aa16.08■□□□□ 0.16
COL5A1-203ENST00000460264 LHFPL6Q9Y693 200 aa16.08■□□□□ 0.16
COL5A1-203ENST00000460264 TCRBV5S2A0A599 114 aa16.07■□□□□ 0.16
COL5A1-203ENST00000460264 RNF212BA8MTL3 300 aa16.07■□□□□ 0.16
COL5A1-203ENST00000460264 CLDN25C9JDP6 229 aa16.07■□□□□ 0.16
COL5A1-203ENST00000460264 TIMM8AO60220 97 aaPredicted RBP16.07■□□□□ 0.16
COL5A1-203ENST00000460264 RENP00797 406 aa16.07■□□□□ 0.16
COL5A1-203ENST00000460264 TUBG1P23258 451 aa16.07■□□□□ 0.16
COL5A1-203ENST00000460264 THBS2P35442 1172 aa16.07■□□□□ 0.16
COL5A1-203ENST00000460264 CENPAP49450 140 aa16.07■□□□□ 0.16
COL5A1-203ENST00000460264 HMGA2P52926 109 aa16.07■□□□□ 0.16
COL5A1-203ENST00000460264 DBPQ10586 325 aaPredicted RBP16.07■□□□□ 0.16
COL5A1-203ENST00000460264 PSG7Q13046 419 aa16.07■□□□□ 0.16
COL5A1-203ENST00000460264 MEP1BQ16820 701 aa16.07■□□□□ 0.16
COL5A1-203ENST00000460264 HFEQ30201 348 aa16.07■□□□□ 0.16
COL5A1-203ENST00000460264 AVPI1Q5T686 147 aa16.07■□□□□ 0.16
COL5A1-203ENST00000460264 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.07■□□□□ 0.16
COL5A1-203ENST00000460264 OR6V1Q8N148 313 aa16.07■□□□□ 0.16
COL5A1-203ENST00000460264 CCDC197Q8NCU1 140 aa16.07■□□□□ 0.16
COL5A1-203ENST00000460264 SLC26A10Q8NG04 563 aa16.07■□□□□ 0.16
COL5A1-203ENST00000460264 ELMOD3Q96FG2 381 aa16.07■□□□□ 0.16
COL5A1-203ENST00000460264 BTBD10Q9BSF8 475 aa16.07■□□□□ 0.16
COL5A1-203ENST00000460264 MUC13Q9H3R2 512 aa16.07■□□□□ 0.16
COL5A1-203ENST00000460264 MSL2Q9HCI7 577 aa16.07■□□□□ 0.16
COL5A1-203ENST00000460264 TUBG2Q9NRH3 451 aa16.07■□□□□ 0.16
COL5A1-203ENST00000460264 TMEFF2Q9UIK5 374 aaPredicted RBP16.07■□□□□ 0.16
COL5A1-203ENST00000460264 ZDHHC8Q9ULC8 765 aa16.07■□□□□ 0.16
COL5A1-203ENST00000460264 B9D1Q9UPM9 204 aa16.07■□□□□ 0.16
COL5A1-203ENST00000460264 STARD10Q9Y365 291 aa16.07■□□□□ 0.16
COL5A1-203ENST00000460264 IDH3BO43837 385 aa16.06■□□□□ 0.16
COL5A1-203ENST00000460264 DBHP09172 617 aa16.06■□□□□ 0.16
COL5A1-203ENST00000460264 NOS3P29474 1203 aa16.06■□□□□ 0.16
COL5A1-203ENST00000460264 HIST1H3AP68431 136 aa16.06■□□□□ 0.16
COL5A1-203ENST00000460264 MVKQ03426 396 aa16.06■□□□□ 0.16
COL5A1-203ENST00000460264 HIST2H3PS2Q5TEC6 136 aa16.06■□□□□ 0.16
COL5A1-203ENST00000460264 LCN8Q6JVE9 175 aa16.06■□□□□ 0.16
COL5A1-203ENST00000460264 RINLQ6ZS11 566 aa16.06■□□□□ 0.16
COL5A1-203ENST00000460264 HIST2H3AQ71DI3 136 aa16.06■□□□□ 0.16
COL5A1-203ENST00000460264 GLCCI1Q86VQ1 547 aa16.06■□□□□ 0.16
COL5A1-203ENST00000460264 OR9Q2Q8NGE9 314 aa16.06■□□□□ 0.16
COL5A1-203ENST00000460264 OR4C15Q8NGM1 316 aa16.06■□□□□ 0.16
COL5A1-203ENST00000460264 SPATA3Q8NHX4 192 aa16.06■□□□□ 0.16
COL5A1-203ENST00000460264 DIRC2Q96SL1 478 aa16.06■□□□□ 0.16
COL5A1-203ENST00000460264 EGLN1Q9GZT9 426 aa16.06■□□□□ 0.16
COL5A1-203ENST00000460264 MAGIXQ9H6Y5 334 aa16.06■□□□□ 0.16
COL5A1-203ENST00000460264 EGLN3Q9H6Z9 239 aa16.06■□□□□ 0.16
COL5A1-203ENST00000460264 SRA1Q9HD15 236 aaKnown RBP16.06■□□□□ 0.16
COL5A1-203ENST00000460264 RPRD1BQ9NQG5 326 aaKnown RBP16.06■□□□□ 0.16
COL5A1-203ENST00000460264 PURGQ9UJV8 347 aaKnown RBP16.06■□□□□ 0.16
COL5A1-203ENST00000460264 CDH10Q9Y6N8 788 aa16.06■□□□□ 0.16
COL5A1-203ENST00000460264 OR6C68A6NDL8 312 aa16.05■□□□□ 0.16
COL5A1-203ENST00000460264 TNFRSF11BO00300 401 aa16.05■□□□□ 0.16
COL5A1-203ENST00000460264 DYNC1I1O14576 645 aa16.05■□□□□ 0.16
COL5A1-203ENST00000460264 UBOX5O94941 541 aa16.05■□□□□ 0.16
COL5A1-203ENST00000460264 MSMBP08118 114 aa16.05■□□□□ 0.16
COL5A1-203ENST00000460264 CD55P08174 381 aa16.05■□□□□ 0.16
COL5A1-203ENST00000460264 T-ENOLP0DO92 83 aa16.05■□□□□ 0.16
COL5A1-203ENST00000460264 KITLGP21583 273 aa16.05■□□□□ 0.16
COL5A1-203ENST00000460264 PCMT1P22061 227 aa16.05■□□□□ 0.16
COL5A1-203ENST00000460264 CALB2P22676 271 aa16.05■□□□□ 0.16
COL5A1-203ENST00000460264 COX10Q12887 443 aa16.05■□□□□ 0.16
COL5A1-203ENST00000460264 SPRNQ5BIV9 151 aa16.05■□□□□ 0.16
COL5A1-203ENST00000460264 ZNF770Q6IQ21 691 aaPredicted RBP16.05■□□□□ 0.16
COL5A1-203ENST00000460264 ZBTB46Q86UZ6 589 aa16.05■□□□□ 0.16
COL5A1-203ENST00000460264 DHFR2Q86XF0 187 aa16.05■□□□□ 0.16
COL5A1-203ENST00000460264 LINC00471Q8N535 108 aa16.05■□□□□ 0.16
COL5A1-203ENST00000460264 SDR9C7Q8NEX9 313 aa16.05■□□□□ 0.16
COL5A1-203ENST00000460264 GJC3Q8NFK1 279 aa16.05■□□□□ 0.16
COL5A1-203ENST00000460264 COG8Q96MW5 612 aa16.05■□□□□ 0.16
COL5A1-203ENST00000460264 DCLRE1CQ96SD1 692 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms