RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 BDH1Q02338 343 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 ZNF85Q03923 595 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 CSTF1Q05048 431 aaKnown RBP3.36□□□□□ -1.87
VPS29-202ENST00000447578 CHRNB3Q05901 458 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 GANABQ14697 944 aaKnown RBP3.36□□□□□ -1.87
VPS29-202ENST00000447578 MS4A18Q3C1V0 323 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 MOGAT2Q3SYC2 334 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 ZC2HC1BQ5TFG8 222 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 AP1ARQ63HQ0 302 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 TBPL2Q6SJ96 375 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 ENPP6Q6UWR7 440 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 GCNT7Q6ZNI0 430 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 GDPGP1Q6ZNW5 385 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 RNF165Q6ZSG1 346 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 TMEM25Q86YD3 366 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 CLVS1Q8IUQ0 354 aaPredicted RBP3.36□□□□□ -1.87
VPS29-202ENST00000447578 RIMKLAQ8IXN7 391 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 MICU2Q8IYU8 434 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 FAM86B1Q8N7N1 296 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 ZSCAN4Q8NAM6 433 aaPredicted RBP3.36□□□□□ -1.87
VPS29-202ENST00000447578 OR4D5Q8NGN0 318 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 FAM3CQ92520 227 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 ELMO1Q92556 727 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 GTF2H4Q92759 462 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 TMBIM1Q969X1 311 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 ECHDC3Q96DC8 303 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 COQ2Q96H96 371 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 ZNF641Q96N77 438 aaPredicted RBP3.36□□□□□ -1.87
VPS29-202ENST00000447578 RBM14Q96PK6 669 aaKnown RBP3.36□□□□□ -1.87
VPS29-202ENST00000447578 TSSK3Q96PN8 268 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 OR52E6Q96RD3 313 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 SH3GL1Q99961 368 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 BBS2Q9BXC9 721 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 EBPLQ9BY08 206 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 GPR61Q9BZJ8 451 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 ZBP1Q9H171 429 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 ELOVL6Q9H5J4 265 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 CLMPQ9H6B4 373 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 PARVBQ9HBI1 364 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 SGK2Q9HBY8 427 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 C1orf109Q9NX04 203 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 SEC14L3Q9UDX4 400 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 TBX21Q9UL17 535 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 NPIPA1Q9UND3 350 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 SLC22A14Q9Y267 594 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 HS3ST2Q9Y278 367 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 AP3M1Q9Y2T2 418 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 PPIL1Q9Y3C6 166 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 NEUROG3Q9Y4Z2 214 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 VWA8A3KMH1 1905 aa3.36□□□□□ -1.87
VPS29-202ENST00000447578 CASP8AP2Q9UKL3 1982 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 IGLV3-16A0A075B6K0 115 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 KCNE1BA0A087WTH5 132 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 A0A096LPI6 279 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 TRBV7-9A0A0J9YWB2 115 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 TEX48A0A1B0GUV7 120 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 A0A1B0GVG6 124 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 A0A1W2PNV4 684 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 A0A1W2PQ67 120 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 OR2AG2A6NM03 316 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 ZNF716A6NP11 495 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 UPK1AO00322 258 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 RFXANKO14593 260 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 E2F6O75461 281 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 RHBDL1O75783 438 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 SCELO95171 688 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 SERPINA1P01009 418 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 CST1P01037 141 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 IGLV1-44P01699 117 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 FTH1P02794 183 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 ZNF735P0CB33 412 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 PRPS2P11908 318 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 BCKDHAP12694 445 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 SDC1P18827 310 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 PGCP20142 388 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 ATP5A1P25705 553 aaKnown RBP3.35□□□□□ -1.87
VPS29-202ENST00000447578 ELK4P28324 431 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 CCR2P41597 374 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 CDKN2CP42773 168 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 MAGEA8P43361 318 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 YAP1P46937 504 aaKnown RBP3.35□□□□□ -1.87
VPS29-202ENST00000447578 IST1P53990 364 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 MFAP2P55001 183 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 ADARB1P78563 741 aaKnown RBP3.35□□□□□ -1.87
VPS29-202ENST00000447578 IRF8Q02556 426 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 DMC1Q14565 340 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 ELAVL3Q14576 367 aaKnown RBP3.35□□□□□ -1.87
VPS29-202ENST00000447578 PON2Q15165 354 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 NEDD8Q15843 81 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 ZIC1Q15915 447 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 SSX2Q16385 188 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 ZFP69Q49AA0 526 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 ZBED5Q49AG3 693 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 PYCR3Q53H96 274 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 CDKL4Q5MAI5 379 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 GPR107Q5VW38 600 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 FAM71F2Q6NXP2 309 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 TTC23LQ6PF05 361 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 CCDC80Q76M96 950 aa3.35□□□□□ -1.87
VPS29-202ENST00000447578 CEACAM19Q7Z692 300 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms