RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 OPRL1P41146 370 aa23.14■■□□□ 1.29
TMEM248-205ENST00000433271 ALDH3B2P48448 385 aa23.14■■□□□ 1.29
TMEM248-205ENST00000433271 ADORA2A-AS1P86434 159 aa23.14■■□□□ 1.29
TMEM248-205ENST00000433271 C4orf17Q53FE4 359 aa23.14■■□□□ 1.29
TMEM248-205ENST00000433271 SYT6Q5T7P8 510 aaPredicted RBP23.14■■□□□ 1.29
TMEM248-205ENST00000433271 MTFR2Q6P444 385 aa23.14■■□□□ 1.29
TMEM248-205ENST00000433271 LRRN1Q6UXK5 716 aa23.14■■□□□ 1.29
TMEM248-205ENST00000433271 CCDC120Q96HB5 630 aa23.14■■□□□ 1.29
TMEM248-205ENST00000433271 HDHD5Q9BXW7 423 aa23.14■■□□□ 1.29
TMEM248-205ENST00000433271 ELOVL5Q9NYP7 299 aa23.14■■□□□ 1.29
TMEM248-205ENST00000433271 COQ3Q9NZJ6 369 aa23.14■■□□□ 1.29
TMEM248-205ENST00000433271 ZNF254O75437 659 aa23.13■■□□□ 1.29
TMEM248-205ENST00000433271 ABHD16AO95870 558 aa23.13■■□□□ 1.29
TMEM248-205ENST00000433271 HLA-HP01893 362 aa23.13■■□□□ 1.29
TMEM248-205ENST00000433271 ACSM1Q08AH1 577 aa23.13■■□□□ 1.29
TMEM248-205ENST00000433271 DOC2BQ14184 412 aa23.13■■□□□ 1.29
TMEM248-205ENST00000433271 CCDC92Q53HC0 331 aaPredicted RBP23.13■■□□□ 1.29
TMEM248-205ENST00000433271 STAC2Q6ZMT1 411 aa23.13■■□□□ 1.29
TMEM248-205ENST00000433271 SPATC1Q76KD6 591 aa23.13■■□□□ 1.29
TMEM248-205ENST00000433271 VASH1Q7L8A9 365 aaPredicted RBP23.13■■□□□ 1.29
TMEM248-205ENST00000433271 BHLHA15Q7RTS1 189 aaPredicted RBP23.13■■□□□ 1.29
TMEM248-205ENST00000433271 FAM220AQ7Z4H9 259 aa23.13■■□□□ 1.29
TMEM248-205ENST00000433271 YIPF7Q8N8F6 280 aa23.13■■□□□ 1.29
TMEM248-205ENST00000433271 MGLLQ99685 303 aa23.13■■□□□ 1.29
TMEM248-205ENST00000433271 OR2H1Q9GZK4 316 aa23.13■■□□□ 1.29
TMEM248-205ENST00000433271 ELOVL3Q9HB03 270 aa23.13■■□□□ 1.29
TMEM248-205ENST00000433271 ZNF878C9JN71 531 aa23.12■■□□□ 1.29
TMEM248-205ENST00000433271 UBL3O95164 117 aa23.12■■□□□ 1.29
TMEM248-205ENST00000433271 HSMCR30P0CW71 290 aa23.12■■□□□ 1.29
TMEM248-205ENST00000433271 PSMB1P20618 241 aaKnown RBP23.12■■□□□ 1.29
TMEM248-205ENST00000433271 PSMB9P28065 219 aa23.12■■□□□ 1.29
TMEM248-205ENST00000433271 ARR3P36575 388 aa23.12■■□□□ 1.29
TMEM248-205ENST00000433271 PSG4Q00888 419 aa23.12■■□□□ 1.29
TMEM248-205ENST00000433271 TSC22D1Q15714 1073 aa23.12■■□□□ 1.29
TMEM248-205ENST00000433271 ELFN2Q5R3F8 820 aa23.12■■□□□ 1.29
TMEM248-205ENST00000433271 C17orf78Q8N4C9 275 aa23.12■■□□□ 1.29
TMEM248-205ENST00000433271 NANOS1Q8WY41 292 aaKnown RBP23.12■■□□□ 1.29
TMEM248-205ENST00000433271 PELI1Q96FA3 418 aa23.12■■□□□ 1.29
TMEM248-205ENST00000433271 RNF121Q9H920 327 aa23.12■■□□□ 1.29
TMEM248-205ENST00000433271 ISYNA1Q9NPH2 558 aa23.12■■□□□ 1.29
TMEM248-205ENST00000433271 DDX28Q9NUL7 540 aaKnown RBP23.12■■□□□ 1.29
TMEM248-205ENST00000433271 ACOXLQ9NUZ1 547 aa23.12■■□□□ 1.29
TMEM248-205ENST00000433271 PLEK2Q9NYT0 353 aa23.12■■□□□ 1.29
TMEM248-205ENST00000433271 ERRFI1Q9UJM3 462 aaPredicted RBP23.12■■□□□ 1.29
TMEM248-205ENST00000433271 SLC5A6Q9Y289 635 aa23.12■■□□□ 1.29
TMEM248-205ENST00000433271 SGCEO43556 437 aa23.11■■□□□ 1.29
TMEM248-205ENST00000433271 H2BFMP0C1H6 154 aa23.11■■□□□ 1.29
TMEM248-205ENST00000433271 RAB35Q15286 201 aa23.11■■□□□ 1.29
TMEM248-205ENST00000433271 TIGD6Q17RP2 521 aa23.11■■□□□ 1.29
TMEM248-205ENST00000433271 LIPNQ5VXI9 398 aa23.11■■□□□ 1.29
TMEM248-205ENST00000433271 KLBQ86Z14 1044 aa23.11■■□□□ 1.29
TMEM248-205ENST00000433271 ASB5Q8WWX0 329 aa23.11■■□□□ 1.29
TMEM248-205ENST00000433271 B3GNT2Q9NY97 397 aa23.11■■□□□ 1.29
TMEM248-205ENST00000433271 LRP12Q9Y561 859 aa23.11■■□□□ 1.29
TMEM248-205ENST00000433271 ZNF503-AS2A6NEH8 195 aa23.11■■□□□ 1.29
TMEM248-205ENST00000433271 CD79AP11912 226 aa23.11■■□□□ 1.29
TMEM248-205ENST00000433271 RIDAP52758 137 aaKnown RBP23.11■■□□□ 1.29
TMEM248-205ENST00000433271 GBX2P52951 348 aaPredicted RBP23.11■■□□□ 1.29
TMEM248-205ENST00000433271 GP2P55259 537 aaKnown RBP23.11■■□□□ 1.29
TMEM248-205ENST00000433271 UBE2NP61088 152 aaKnown RBP23.11■■□□□ 1.29
TMEM248-205ENST00000433271 MRPL28Q13084 256 aaKnown RBP23.11■■□□□ 1.29
TMEM248-205ENST00000433271 SLC25A35Q3KQZ1 300 aa23.11■■□□□ 1.29
TMEM248-205ENST00000433271 HIST2H2ABQ8IUE6 130 aaPredicted RBP23.11■■□□□ 1.29
TMEM248-205ENST00000433271 HAVCR2Q8TDQ0 301 aa23.11■■□□□ 1.29
TMEM248-205ENST00000433271 HDHD2Q9H0R4 259 aa23.11■■□□□ 1.29
TMEM248-205ENST00000433271 TRIM36Q9NQ86 728 aa23.11■■□□□ 1.29
TMEM248-205ENST00000433271 SLC17A5Q9NRA2 495 aa23.11■■□□□ 1.29
TMEM248-205ENST00000433271 CHD6Q8TD26 2715 aa23.1■■□□□ 1.29
TMEM248-205ENST00000433271 ARPC4-TTLL3A0A0A6YYG9 625 aa23.1■■□□□ 1.29
TMEM248-205ENST00000433271 LALBAP00709 142 aa23.1■■□□□ 1.29
TMEM248-205ENST00000433271 IL32P24001 234 aa23.1■■□□□ 1.29
TMEM248-205ENST00000433271 RAB1AP62820 205 aa23.1■■□□□ 1.29
TMEM248-205ENST00000433271 BDH1Q02338 343 aa23.1■■□□□ 1.29
TMEM248-205ENST00000433271 MLLT11Q13015 90 aaPredicted RBP23.1■■□□□ 1.29
TMEM248-205ENST00000433271 TAF13Q15543 124 aa23.1■■□□□ 1.29
TMEM248-205ENST00000433271 ARMCX4Q5H9R4 360 aa23.1■■□□□ 1.29
TMEM248-205ENST00000433271 ZNF774Q6NX45 483 aa23.1■■□□□ 1.29
TMEM248-205ENST00000433271 TMEM53Q6P2H8 277 aa23.1■■□□□ 1.29
TMEM248-205ENST00000433271 ALDH16A1Q8IZ83 802 aa23.1■■□□□ 1.29
TMEM248-205ENST00000433271 LILRB4Q8NHJ6 448 aa23.1■■□□□ 1.29
TMEM248-205ENST00000433271 ATF6BQ99941 703 aa23.1■■□□□ 1.29
TMEM248-205ENST00000433271 WNT5BQ9H1J7 359 aa23.1■■□□□ 1.29
TMEM248-205ENST00000433271 HIVEP3Q5T1R4 2406 aa23.09■■□□□ 1.29
TMEM248-205ENST00000433271 SYNGR3O43761 229 aa23.09■■□□□ 1.29
TMEM248-205ENST00000433271 HOXC12P31275 282 aa23.09■■□□□ 1.29
TMEM248-205ENST00000433271 DCTDP32321 178 aa23.09■■□□□ 1.29
TMEM248-205ENST00000433271 FAM27E3Q08E93 113 aa23.09■■□□□ 1.29
TMEM248-205ENST00000433271 ECH1Q13011 328 aa23.09■■□□□ 1.29
TMEM248-205ENST00000433271 RAB39AQ14964 217 aa23.09■■□□□ 1.29
TMEM248-205ENST00000433271 GSG1Q2KHT4 349 aa23.09■■□□□ 1.29
TMEM248-205ENST00000433271 PABPC1L2AQ5JQF8 200 aa23.09■■□□□ 1.29
TMEM248-205ENST00000433271 NIPAL2Q9H841 368 aa23.09■■□□□ 1.29
TMEM248-205ENST00000433271 OBP2BQ9NPH6 170 aa23.09■■□□□ 1.29
TMEM248-205ENST00000433271 OR5H1A6NKK0 313 aa23.08■■□□□ 1.29
TMEM248-205ENST00000433271 E9PI62 339 aa23.08■■□□□ 1.29
TMEM248-205ENST00000433271 DOK2O60496 412 aa23.08■■□□□ 1.29
TMEM248-205ENST00000433271 TAS2R43P59537 309 aa23.08■■□□□ 1.29
TMEM248-205ENST00000433271 GRB2P62993 217 aaKnown RBP23.08■■□□□ 1.29
TMEM248-205ENST00000433271 TUBA1BP68363 451 aa23.08■■□□□ 1.29
TMEM248-205ENST00000433271 TUBA1AQ71U36 451 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms