RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 RNF121Q9H920 327 aa5.29□□□□□ -1.56
LSM5-203ENST00000409782 CALHM2Q9HA72 323 aa5.29□□□□□ -1.56
LSM5-203ENST00000409782 A4GALTQ9NPC4 353 aa5.29□□□□□ -1.56
LSM5-203ENST00000409782 GIN1Q9NXP7 522 aa5.29□□□□□ -1.56
LSM5-203ENST00000409782 CNOT2Q9NZN8 540 aaKnown RBP5.29□□□□□ -1.56
LSM5-203ENST00000409782 TMED7Q9Y3B3 224 aa5.29□□□□□ -1.56
LSM5-203ENST00000409782 RRP15Q9Y3B9 282 aaKnown RBP5.29□□□□□ -1.56
LSM5-203ENST00000409782 ARHGAP21Q5T5U3 1957 aa5.29□□□□□ -1.56
LSM5-203ENST00000409782 FAM230AA0A1W2PPH8 454 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 A0A1W2PQD3 144 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 TMEM120BA0PK00 339 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 NKX2-6A6NCS4 301 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 B4DXG7 233 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 KCNK2O95069 426 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 OXSR1O95747 527 aaPredicted RBP5.28□□□□□ -1.56
LSM5-203ENST00000409782 ANGPTL1O95841 491 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 C6orf47O95873 294 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 IGKV1D-16P01601 117 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 ZNF12P17014 697 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 ZNF708P17019 499 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 BGNP21810 368 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 OPRM1P35372 400 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 SOX6P35712 828 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 RFX3P48380 749 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 LHX2P50458 406 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 CLDN18P56856 261 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 LGALS3BPQ08380 585 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 BST1Q10588 318 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 STX5Q13190 355 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 STX3Q13277 289 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 DUSP5Q16690 384 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 ZNF260Q3ZCT1 412 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 GLYR1Q49A26 553 aaPredicted RBP5.28□□□□□ -1.56
LSM5-203ENST00000409782 BEND6Q5SZJ8 279 aaPredicted RBP5.28□□□□□ -1.56
LSM5-203ENST00000409782 HHATQ5VTY9 493 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 RAET1LQ5VY80 246 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 OR5M10Q6IEU7 315 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 COX8CQ7Z4L0 72 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 KRTCAP2Q8N6L1 136 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 MAPKAPK5-AS1Q8N8E1 139 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 NRACQ8N912 160 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 C9orf106Q8NAJ2 232 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 RELL2Q8NC24 303 aaPredicted RBP5.28□□□□□ -1.56
LSM5-203ENST00000409782 OR8J2Q8NGG1 315 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 FAM110BQ8TC76 370 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 PIK3R3Q92569 461 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 RNASE6Q93091 150 aaKnown RBP5.28□□□□□ -1.56
LSM5-203ENST00000409782 TESCQ96BS2 214 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 TLCD1Q96CP7 247 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 DOCK7Q96N67 2140 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 TUBA1CQ9BQE3 449 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 URM1Q9BTM9 101 aaKnown RBP5.28□□□□□ -1.56
LSM5-203ENST00000409782 SFXN3Q9BWM7 321 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 UCK2Q9BZX2 261 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 PIGUQ9H490 435 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 MEAF6Q9HAF1 191 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 NKIRAS1Q9NYS0 192 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 FLRT3Q9NZU0 649 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 CLCF1Q9UBD9 225 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 ZNF629Q9UEG4 869 aaPredicted RBP5.28□□□□□ -1.56
LSM5-203ENST00000409782 KCNS2Q9ULS6 477 aa5.28□□□□□ -1.56
LSM5-203ENST00000409782 FAF1Q9UNN5 650 aaPredicted RBP5.28□□□□□ -1.56
LSM5-203ENST00000409782 TRBV5-5A0A0J9YX44 114 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 SERINC4A6NH21 518 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 TRPC5OSA6NMA1 111 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 C17orf51A8MQB3 221 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 E9PBE3 544 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 SLCO1B7G3V0H7 640 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 H3BNH8 94 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 ARPC1BO15143 372 aaKnown RBP5.27□□□□□ -1.57
LSM5-203ENST00000409782 HDAC3O15379 428 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 SNNO75324 88 aaPredicted RBP5.27□□□□□ -1.57
LSM5-203ENST00000409782 SCGB2A1O75556 95 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 HMGN2P05204 90 aaKnown RBP5.27□□□□□ -1.57
LSM5-203ENST00000409782 CRHP06850 196 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 HPGDP15428 266 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 ATP6V1C1P21283 382 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 TBXA2RP21731 343 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 PITPNBP48739 271 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 CCT3P49368 545 aaKnown RBP5.27□□□□□ -1.57
LSM5-203ENST00000409782 PCYT1AP49585 367 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 HOXA1P49639 335 aaPredicted RBP5.27□□□□□ -1.57
LSM5-203ENST00000409782 HCFC1P51610 2035 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 ZNF136P52737 540 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 MAGOHP61326 146 aaKnown RBP5.27□□□□□ -1.57
LSM5-203ENST00000409782 HBA1P69905 142 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 GABPB1Q06547 395 aaPredicted RBP5.27□□□□□ -1.57
LSM5-203ENST00000409782 TMEM44Q2T9K0 475 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 DCST2Q5T1A1 773 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 OR2A2Q6IF42 318 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 DCHS2Q6V1P9 2916 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 MTERF4Q7Z6M4 381 aaKnown RBP5.27□□□□□ -1.57
LSM5-203ENST00000409782 MARCH3Q86UD3 253 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 RTN4RL2Q86UN3 420 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 ZNF573Q86YE8 665 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 GRAMD2AQ8IUY3 354 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 CDK20Q8IZL9 346 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 GTPBP8Q8N3Z3 284 aaPredicted RBP5.27□□□□□ -1.57
LSM5-203ENST00000409782 THRSPQ92748 146 aa5.27□□□□□ -1.57
LSM5-203ENST00000409782 CDS1Q92903 461 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 179.2 ms