RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 POLE3Q9NRF9 147 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 DCAF13Q9NV06 445 aaKnown RBP3.57□□□□□ -1.84
CLK1-203ENST00000409769 P2RX2Q9UBL9 471 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 BCAP29Q9UHQ4 241 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 PTPRQQ9UMZ3 2332 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 LIPT1Q9Y234 373 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 ANGPT4Q9Y264 503 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 CFL2Q9Y281 166 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 LIPGQ9Y5X9 500 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 MRPS18BQ9Y676 258 aaKnown RBP3.57□□□□□ -1.84
CLK1-203ENST00000409769 CELSR3Q9NYQ7 3312 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 CACNA1AO00555 2505 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 CACNA1GO43497 2377 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 ZFHX4Q86UP3 3567 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 A0A087WV48 116 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 TRBV11-1A0A0K0K1C0 115 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 C2orf92A0A1B0GVN3 265 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 DHRS12A0PJE2 317 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 ACOX3O15254 700 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 TSPAN2O60636 221 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 FCMRO60667 390 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 UGT2B17O75795 530 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 CLDN1O95832 211 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 SERPINA1P01009 418 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 OPN1SWP03999 348 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 PABPC4LP0CB38 370 aaKnown RBP3.56□□□□□ -1.84
CLK1-203ENST00000409769 LCN1P31025 176 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 OPRL1P41146 370 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 ERFP50548 548 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 SELENOWP63302 87 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 MRPS22P82650 360 aaKnown RBP3.56□□□□□ -1.84
CLK1-203ENST00000409769 SRSF6Q13247 344 aaKnown RBP3.56□□□□□ -1.84
CLK1-203ENST00000409769 GNA13Q14344 377 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 TGIF1Q15583 401 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 ZNHIT3Q15649 155 aaPredicted RBP3.56□□□□□ -1.84
CLK1-203ENST00000409769 TAB1Q15750 504 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 ZNF141Q15928 474 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 NNATQ16517 81 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 DUSP7Q16829 419 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 LRRC23Q53EV4 343 aaPredicted RBP3.56□□□□□ -1.84
CLK1-203ENST00000409769 CYBRD1Q53TN4 286 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 CCNJQ5T5M9 372 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 ATAD3BQ5T9A4 648 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 H3F3CQ6NXT2 135 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 DHRS4L2Q6PKH6 230 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 ENPP6Q6UWR7 440 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 HSDL2Q6YN16 418 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 EIF3MQ7L2H7 374 aaKnown RBP3.56□□□□□ -1.84
CLK1-203ENST00000409769 PIWIL3Q7Z3Z3 882 aaKnown RBP3.56□□□□□ -1.84
CLK1-203ENST00000409769 TSEN54Q7Z6J9 526 aaKnown RBP3.56□□□□□ -1.84
CLK1-203ENST00000409769 GALNT10Q86SR1 603 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 LRRTM1Q86UE6 522 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 COMTD1Q86VU5 262 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 RAB43Q86YS6 212 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 SLC34A3Q8N130 599 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 BCORP1Q8N888 145 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 COX18Q8N8Q8 333 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 GPR32P1Q8NGA4 272 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 OR5T2Q8NGG2 359 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 OR6S1Q8NH40 331 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 GPR151Q8TDV0 419 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 PHF10Q8WUB8 498 aaKnown RBP3.56□□□□□ -1.84
CLK1-203ENST00000409769 CANT1Q8WVQ1 401 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 PSMF1Q92530 271 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 POP5Q969H6 163 aaKnown RBP3.56□□□□□ -1.84
CLK1-203ENST00000409769 TMBIM1Q969X1 311 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 FAM162AQ96A26 154 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 NTNG2Q96CW9 530 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 RMND5BQ96G75 393 aaPredicted RBP3.56□□□□□ -1.84
CLK1-203ENST00000409769 RNF145Q96MT1 663 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 IP6K3Q96PC2 410 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 PIGQQ9BRB3 760 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 NAA11Q9BSU3 229 aaPredicted RBP3.56□□□□□ -1.84
CLK1-203ENST00000409769 CENPOQ9BU64 300 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 DOHHQ9BU89 302 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 GPN2Q9H9Y4 310 aaPredicted RBP3.56□□□□□ -1.84
CLK1-203ENST00000409769 S100A14Q9HCY8 104 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 EXD2Q9NVH0 621 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 ARMC1Q9NVT9 282 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 CALML5Q9NZT1 146 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 COPS7AQ9UBW8 275 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 FBXL4Q9UKA2 621 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 PRDM4Q9UKN5 801 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 SAMD4AQ9UPU9 718 aaKnown RBP3.56□□□□□ -1.84
CLK1-203ENST00000409769 NCKAP5O14513 1909 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 ASPMQ8IZT6 3477 aa3.56□□□□□ -1.84
CLK1-203ENST00000409769 NSG1A0A0A6YYJ2 146 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 NPIPA5A0A0B4J1W7 369 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 A0A1W2PQD3 144 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 A0A1W2PR80 420 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 OR6C70A6NIJ9 312 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 C5orf58C9J3I9 102 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 NPIPA7E9PJI5 369 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 H0YHG0 523 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 FADS1O60427 444 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 TPST1O60507 370 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 TPST2O60704 377 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 DPM1O60762 260 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 UGT2B11O75310 529 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 FKBP6O75344 327 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms