RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 ZNF324BQ6AW86 544 aaPredicted RBP18.5■□□□□ 0.55
TPM1-208ENST00000404484 OR7E24Q6IFN5 339 aa18.5■□□□□ 0.55
TPM1-208ENST00000404484 KLHL24Q6TFL4 600 aa18.5■□□□□ 0.55
TPM1-208ENST00000404484 SPATC1Q76KD6 591 aa18.5■□□□□ 0.55
TPM1-208ENST00000404484 ADGRE4PQ86SQ3 457 aa18.5■□□□□ 0.55
TPM1-208ENST00000404484 THRSPQ92748 146 aa18.5■□□□□ 0.55
TPM1-208ENST00000404484 RNF166Q96A37 237 aaPredicted RBP18.5■□□□□ 0.55
TPM1-208ENST00000404484 NABP1Q96AH0 204 aa18.5■□□□□ 0.55
TPM1-208ENST00000404484 APH1AQ96BI3 265 aa18.5■□□□□ 0.55
TPM1-208ENST00000404484 MAP6Q96JE9 813 aa18.5■□□□□ 0.55
TPM1-208ENST00000404484 C4orf45Q96LM5 186 aa18.5■□□□□ 0.55
TPM1-208ENST00000404484 ALKBH3Q96Q83 286 aaPredicted RBP18.5■□□□□ 0.55
TPM1-208ENST00000404484 SLIRPQ9GZT3 109 aaKnown RBP18.5■□□□□ 0.55
TPM1-208ENST00000404484 GPR35Q9HC97 309 aa18.5■□□□□ 0.55
TPM1-208ENST00000404484 CENPMQ9NSP4 180 aa18.5■□□□□ 0.55
TPM1-208ENST00000404484 R4GMQ9 66 aa18.5■□□□□ 0.55
TPM1-208ENST00000404484 SC5DO75845 299 aa18.49■□□□□ 0.55
TPM1-208ENST00000404484 ARL6IP5O75915 188 aa18.49■□□□□ 0.55
TPM1-208ENST00000404484 CDRT1O95170 752 aa18.49■□□□□ 0.55
TPM1-208ENST00000404484 MYL9P24844 172 aa18.49■□□□□ 0.55
TPM1-208ENST00000404484 RORCP51449 518 aa18.49■□□□□ 0.55
TPM1-208ENST00000404484 ZNF404Q494X3 552 aa18.49■□□□□ 0.55
TPM1-208ENST00000404484 NRN1LQ496H8 165 aa18.49■□□□□ 0.55
TPM1-208ENST00000404484 FAM27BQ5VT28 67 aa18.49■□□□□ 0.55
TPM1-208ENST00000404484 CEACAM19Q7Z692 300 aa18.49■□□□□ 0.55
TPM1-208ENST00000404484 GJC3Q8NFK1 279 aa18.49■□□□□ 0.55
TPM1-208ENST00000404484 MCFD2Q8NI22 146 aa18.49■□□□□ 0.55
TPM1-208ENST00000404484 GMPPAQ96IJ6 420 aaPredicted RBP18.49■□□□□ 0.55
TPM1-208ENST00000404484 PDCD1LG2Q9BQ51 273 aa18.49■□□□□ 0.55
TPM1-208ENST00000404484 ZNF416Q9BWM5 594 aa18.49■□□□□ 0.55
TPM1-208ENST00000404484 MMP27Q9H306 513 aa18.49■□□□□ 0.55
TPM1-208ENST00000404484 TMEM38BQ9NVV0 291 aa18.49■□□□□ 0.55
TPM1-208ENST00000404484 FRRS1LQ9P0K9 344 aa18.49■□□□□ 0.55
TPM1-208ENST00000404484 CLCF1Q9UBD9 225 aa18.49■□□□□ 0.55
TPM1-208ENST00000404484 HIVEP3Q5T1R4 2406 aa18.49■□□□□ 0.55
TPM1-208ENST00000404484 A0A1B0GTH9 108 aa18.48■□□□□ 0.55
TPM1-208ENST00000404484 AHRRA9YTQ3 701 aa18.48■□□□□ 0.55
TPM1-208ENST00000404484 ZNF587BE7ETH6 402 aa18.48■□□□□ 0.55
TPM1-208ENST00000404484 ZFPL1O95159 310 aa18.48■□□□□ 0.55
TPM1-208ENST00000404484 PAX7P23759 505 aa18.48■□□□□ 0.55
TPM1-208ENST00000404484 MTNR1BP49286 362 aa18.48■□□□□ 0.55
TPM1-208ENST00000404484 ROR2Q01974 943 aaKnown RBP18.48■□□□□ 0.55
TPM1-208ENST00000404484 TAF13Q15543 124 aa18.48■□□□□ 0.55
TPM1-208ENST00000404484 KRTCAP3Q53RY4 240 aa18.48■□□□□ 0.55
TPM1-208ENST00000404484 ABHD12BQ7Z5M8 362 aaPredicted RBP18.48■□□□□ 0.55
TPM1-208ENST00000404484 ZNF676Q8N7Q3 588 aa18.48■□□□□ 0.55
TPM1-208ENST00000404484 TBC1D15Q8TC07 691 aa18.48■□□□□ 0.55
TPM1-208ENST00000404484 HSD17B8Q92506 261 aa18.48■□□□□ 0.55
TPM1-208ENST00000404484 SLX1AQ9BQ83 275 aa18.48■□□□□ 0.55
TPM1-208ENST00000404484 WACQ9BTA9 647 aa18.48■□□□□ 0.55
TPM1-208ENST00000404484 OR4C45A6NMZ5 311 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 RPL36A-HNRNPH2H7BZ11 118 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 CASKO14936 926 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 WISP2O76076 250 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 TGM6O95932 706 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 CST2P09228 141 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 MAPK3P27361 379 aaPredicted RBP18.47■□□□□ 0.55
TPM1-208ENST00000404484 SDC2P34741 201 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 RPS19P39019 145 aaKnown RBP18.47■□□□□ 0.55
TPM1-208ENST00000404484 GRB2P62993 217 aaKnown RBP18.47■□□□□ 0.55
TPM1-208ENST00000404484 ENDOGQ14249 297 aaKnown RBP18.47■□□□□ 0.55
TPM1-208ENST00000404484 EIF2S3LQ2VIR3 472 aaKnown RBP18.47■□□□□ 0.55
TPM1-208ENST00000404484 CEACAM16Q2WEN9 425 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 ZMAT1Q5H9K5 638 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 TSPO2Q5TGU0 170 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 CFAP77Q6ZQR2 320 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 ZNF100Q8IYN0 542 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 SLC25A46Q96AG3 418 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 GPR137Q96N19 417 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 DCLRE1CQ96SD1 692 aaKnown RBP18.47■□□□□ 0.55
TPM1-208ENST00000404484 FOXB1Q99853 325 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 SNTG1Q9NSN8 517 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 UPB1Q9UBR1 384 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 CLEC4AQ9UMR7 237 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 LRRK2Q5S007 2527 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 CACNA1CQ13936 2221 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 USP9XQ93008 2570 aaPredicted RBP18.47■□□□□ 0.55
TPM1-208ENST00000404484 ZNF879B4DU55 563 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 LOC110117498-PIK3R3F6TDL0 507 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 SS18L1O75177 396 aaPredicted RBP18.47■□□□□ 0.55
TPM1-208ENST00000404484 FARS2O95363 451 aaKnown RBP18.47■□□□□ 0.55
TPM1-208ENST00000404484 WNT11O96014 354 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 HSD11B1P28845 292 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 AGTR1P30556 359 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 PEX19P40855 299 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 WDR38Q5JTN6 314 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 CATSPERDQ86XM0 798 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 TRIB1Q96RU8 372 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 NXF2Q9GZY0 626 aaKnown RBP18.47■□□□□ 0.55
TPM1-208ENST00000404484 MOB1AQ9H8S9 216 aa18.47■□□□□ 0.55
TPM1-208ENST00000404484 CALRP27797 417 aaKnown RBP18.46■□□□□ 0.55
TPM1-208ENST00000404484 MMP16P51512 607 aa18.46■□□□□ 0.55
TPM1-208ENST00000404484 PCBD1P61457 104 aa18.46■□□□□ 0.55
TPM1-208ENST00000404484 RPS11P62280 158 aaKnown RBP eCLIP18.46■□□□□ 0.55
TPM1-208ENST00000404484 SRSF1Q07955 248 aaKnown RBP eCLIP18.46■□□□□ 0.552e-10■■■□□ 14.7
TPM1-208ENST00000404484 OR2A2Q6IF42 318 aa18.46■□□□□ 0.55
TPM1-208ENST00000404484 PLXDC2Q6UX71 529 aa18.46■□□□□ 0.55
TPM1-208ENST00000404484 UNQ9370/PRO34162Q6UXP9 181 aa18.46■□□□□ 0.55
TPM1-208ENST00000404484 SYT9Q86SS6 491 aa18.46■□□□□ 0.55
TPM1-208ENST00000404484 TPRA1Q86W33 373 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms