RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 VSX1Q9NZR4 365 aaPredicted RBP15.41■□□□□ 0.06
TNFSF13-205ENST00000396545 CLCF1Q9UBD9 225 aa15.41■□□□□ 0.06
TNFSF13-205ENST00000396545 CMAHPQ9Y471 501 aa15.41■□□□□ 0.06
TNFSF13-205ENST00000396545 UGT2A1Q9Y4X1 527 aa15.41■□□□□ 0.06
TNFSF13-205ENST00000396545 A6NIZ1 184 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 SHISA8B8ZZ34 492 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 LOC110117498-PIK3R3F6TDL0 507 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 XKRYO14609 159 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 HRGP04196 525 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 IL11P20809 199 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 AHCYP23526 432 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 LHX2P50458 406 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 DAP3P51398 398 aaKnown RBP15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 GBX2P52951 348 aaPredicted RBP15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 RAP1BP61224 184 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 RAP1AP62834 184 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 SRYQ05066 204 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 OXA1LQ15070 435 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 CDK5R1Q15078 307 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 CCDC58Q4VC31 144 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 SPANXN2Q5MJ10 180 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 PLXDC2Q6UX71 529 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 HDDC2Q7Z4H3 204 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 MS4A15Q8N5U1 240 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 MINDY2Q8NBR6 621 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 SNX33Q8WV41 574 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 SMIM19Q96E16 107 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 DNAJA3Q96EY1 480 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 MNTQ99583 582 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 SLC30A2Q9BRI3 323 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 GSX1Q9H4S2 264 aaPredicted RBP15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 FAIMQ9NVQ4 179 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 GRIP1Q9Y3R0 1128 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 FKBP7Q9Y680 259 aa15.4■□□□□ 0.06
TNFSF13-205ENST00000396545 MED12LQ86YW9 2145 aa15.39■□□□□ 0.05
TNFSF13-205ENST00000396545 ISPDA4D126 451 aa15.39■□□□□ 0.05
TNFSF13-205ENST00000396545 PRSS37A4D1T9 235 aa15.39■□□□□ 0.05
TNFSF13-205ENST00000396545 FAM171A2A8MVW0 826 aa15.39■□□□□ 0.05
TNFSF13-205ENST00000396545 H7C1C5 153 aa15.39■□□□□ 0.05
TNFSF13-205ENST00000396545 CASKO14936 926 aa15.39■□□□□ 0.05
TNFSF13-205ENST00000396545 ARHGEF9O43307 516 aa15.39■□□□□ 0.05
TNFSF13-205ENST00000396545 ACVR1BP36896 505 aa15.39■□□□□ 0.05
TNFSF13-205ENST00000396545 CENPAP49450 140 aa15.39■□□□□ 0.05
TNFSF13-205ENST00000396545 B3GALT5-AS1P59052 145 aa15.39■□□□□ 0.05
TNFSF13-205ENST00000396545 LCN6P62502 163 aa15.39■□□□□ 0.05
TNFSF13-205ENST00000396545 LUZP2Q86TE4 346 aa15.39■□□□□ 0.05
TNFSF13-205ENST00000396545 SNX29P2Q8IUI4 249 aa15.39■□□□□ 0.05
TNFSF13-205ENST00000396545 ZNF511Q8NB15 262 aa15.39■□□□□ 0.05
TNFSF13-205ENST00000396545 ABHD4Q8TB40 342 aa15.39■□□□□ 0.05
TNFSF13-205ENST00000396545 AP3S1Q92572 193 aa15.39■□□□□ 0.05
TNFSF13-205ENST00000396545 COX4I2Q96KJ9 171 aa15.39■□□□□ 0.05
TNFSF13-205ENST00000396545 CEP19Q96LK0 163 aa15.39■□□□□ 0.05
TNFSF13-205ENST00000396545 SYT4Q9H2B2 425 aa15.39■□□□□ 0.05
TNFSF13-205ENST00000396545 SRA1Q9HD15 236 aaKnown RBP15.39■□□□□ 0.05
TNFSF13-205ENST00000396545 TBCCD1Q9NVR7 557 aa15.39■□□□□ 0.05
TNFSF13-205ENST00000396545 A0A1W2PPR1 153 aa15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 MS4A18H0YCH9 400 aa15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 SULT2B1O00204 365 aa15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 VAMP5O95183 116 aa15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 CALRP27797 417 aaKnown RBP15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 STARP49675 285 aa15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 CLDN18P56856 261 aa15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 OR2B6P58173 313 aa15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 SIRPAP78324 504 aa15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 SLC3A1Q07837 685 aa15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 MS4A18Q3C1V0 323 aa15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 C11orf91Q3C1V1 193 aa15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 RPL22L1Q6P5R6 122 aaKnown RBP15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 KCTD20Q7Z5Y7 419 aa15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 LYSMD2Q8IV50 215 aa15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 LAX1Q8IWV1 398 aa15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 GCNT2Q8N0V5 402 aa15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 WFDC11Q8NEX6 87 aa15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 OR5M1Q8NGP8 315 aa15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 INTS12Q96CB8 462 aaKnown RBP15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 KLHL15Q96M94 604 aa15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 SFXN2Q96NB2 322 aa15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 NAA11Q9BSU3 229 aaPredicted RBP15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 TTTY10Q9BZA0 68 aa15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 MIXL1Q9H2W2 232 aa15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 DAPK2Q9UIK4 370 aa15.38■□□□□ 0.05
TNFSF13-205ENST00000396545 PRR32B1ATL7 298 aa15.37■□□□□ 0.05
TNFSF13-205ENST00000396545 MAGEB4O15481 346 aaPredicted RBP15.37■□□□□ 0.05
TNFSF13-205ENST00000396545 ZNF708P17019 499 aa15.37■□□□□ 0.05
TNFSF13-205ENST00000396545 CFL1P23528 166 aaKnown RBP15.37■□□□□ 0.05
TNFSF13-205ENST00000396545 SFTPDP35247 375 aa15.37■□□□□ 0.05
TNFSF13-205ENST00000396545 BLVRAP53004 296 aa15.37■□□□□ 0.05
TNFSF13-205ENST00000396545 PDSS1Q5T2R2 415 aa15.37■□□□□ 0.05
TNFSF13-205ENST00000396545 ESPNLQ6ZVH7 1005 aa15.37■□□□□ 0.05
TNFSF13-205ENST00000396545 HAVCR2Q8TDQ0 301 aa15.37■□□□□ 0.05
TNFSF13-205ENST00000396545 GHSRQ92847 366 aa15.37■□□□□ 0.05
TNFSF13-205ENST00000396545 RNF166Q96A37 237 aaPredicted RBP15.37■□□□□ 0.05
TNFSF13-205ENST00000396545 SDHCQ99643 169 aaPredicted RBP15.37■□□□□ 0.05
TNFSF13-205ENST00000396545 CCDC32Q9BV29 185 aa15.37■□□□□ 0.05
TNFSF13-205ENST00000396545 PIGMQ9H3S5 423 aa15.37■□□□□ 0.05
TNFSF13-205ENST00000396545 ACOXLQ9NUZ1 547 aa15.37■□□□□ 0.05
TNFSF13-205ENST00000396545 GNG8Q9UK08 70 aa15.37■□□□□ 0.05
TNFSF13-205ENST00000396545 RASD1Q9Y272 281 aa15.37■□□□□ 0.05
TNFSF13-205ENST00000396545 V9GYH0 126 aa15.37■□□□□ 0.05
TNFSF13-205ENST00000396545 hCG_2014768A0A024R1R8 64 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms