RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 HMX3A6NHT5 357 aa9.91□□□□□ -0.82
TCOF1-203ENST00000394269 ACP1P24666 158 aa9.91□□□□□ -0.82
TCOF1-203ENST00000394269 PRSS12P56730 875 aa9.91□□□□□ -0.82
TCOF1-203ENST00000394269 C2orf76Q3KRA6 126 aa9.91□□□□□ -0.82
TCOF1-203ENST00000394269 ACER2Q5QJU3 275 aa9.91□□□□□ -0.82
TCOF1-203ENST00000394269 LRRTM1Q86UE6 522 aa9.91□□□□□ -0.82
TCOF1-203ENST00000394269 BEST3Q8N1M1 668 aa9.91□□□□□ -0.82
TCOF1-203ENST00000394269 UXS1Q8NBZ7 420 aa9.91□□□□□ -0.82
TCOF1-203ENST00000394269 ZBTB44Q8NCP5 570 aa9.91□□□□□ -0.82
TCOF1-203ENST00000394269 OR51E1Q8TCB6 317 aa9.91□□□□□ -0.82
TCOF1-203ENST00000394269 ROBO4Q8WZ75 1007 aa9.91□□□□□ -0.82
TCOF1-203ENST00000394269 SOX7Q9BT81 388 aa9.91□□□□□ -0.82
TCOF1-203ENST00000394269 C1orf198Q9H425 327 aa9.91□□□□□ -0.82
TCOF1-203ENST00000394269 PLSCR3Q9NRY6 295 aa9.91□□□□□ -0.82
TCOF1-203ENST00000394269 GDF2Q9UK05 429 aaPredicted RBP9.91□□□□□ -0.82
TCOF1-203ENST00000394269 A0A1W2PQ72 361 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 SYT7O43581 403 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 ZIC3O60481 467 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 GMDSO60547 372 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 DCTDP32321 178 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 MLF1P58340 268 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 GUCA2AQ02747 115 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 CHAF1BQ13112 559 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 IL22RA1Q8N6P7 574 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 M1APQ8TC57 530 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 NPRL2Q8WTW4 380 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 PHYHIPQ92561 330 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 SFXN2Q96NB2 322 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 KLHL9Q9P2J3 617 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 SLC5A6Q9Y289 635 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 R4GMQ9 66 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 DOCK7Q96N67 2140 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 TRBV5-5A0A0J9YX44 114 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 C9orf172C9J069 976 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 TLX3O43711 291 aaPredicted RBP9.9□□□□□ -0.82
TCOF1-203ENST00000394269 TRAF3IP2O43734 574 aaPredicted RBP9.9□□□□□ -0.82
TCOF1-203ENST00000394269 ZNF432O94892 652 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 DHFRP00374 187 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 TCRBP04435 133 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 LIFP15018 202 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 SPINK2P20155 84 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 SLC6A1P30531 599 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 SLC35A1P78382 337 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 ZP4Q12836 540 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 RAB11BQ15907 218 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 THEM4Q5T1C6 240 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 ABHD12BQ7Z5M8 362 aaPredicted RBP9.9□□□□□ -0.82
TCOF1-203ENST00000394269 ZNF283Q8N7M2 679 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 ZNF454Q8N9F8 522 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 OR13C9Q8NGT0 318 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 ST7LQ8TDW4 575 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 DVL3Q92997 716 aaPredicted RBP9.9□□□□□ -0.82
TCOF1-203ENST00000394269 FAM3DQ96BQ1 224 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 OXGR1Q96P68 337 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 STEAP1Q9UHE8 339 aa9.9□□□□□ -0.82
TCOF1-203ENST00000394269 A0A0A6YYJ9 748 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 A0A0J9YW62 118 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 TSC22D2O75157 780 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 HLA-DQB1P01920 261 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 CSN2P05814 226 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 PTBP1P26599 531 aaKnown RBP eCLIP9.89□□□□□ -0.83
TCOF1-203ENST00000394269 GDF1P27539 372 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 MMP15P51511 669 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 SNRPD2P62316 118 aaKnown RBP9.89□□□□□ -0.83
TCOF1-203ENST00000394269 NAA40Q86UY6 237 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 CATSPERDQ86XM0 798 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 NAXDQ8IW45 347 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 EDEM2Q9BV94 578 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 CDX4O14627 284 aaPredicted RBP9.89□□□□□ -0.83
TCOF1-203ENST00000394269 ZNHIT1O43257 154 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 SSNA1O43805 119 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 KRT33AO76009 404 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 ONECUT2O95948 504 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 GP1BAP07359 652 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 CYB561P49447 251 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 SELENOPP49908 381 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 GABREP78334 506 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 FAM57BQ71RH2 274 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 DUSP18Q8NEJ0 188 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 NOXO1Q8NFA2 376 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 ZNF486Q96H40 463 aaPredicted RBP9.89□□□□□ -0.83
TCOF1-203ENST00000394269 TAAR9Q96RI9 348 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 HES7Q9BYE0 225 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 MED28Q9H204 178 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 PROK2Q9HC23 129 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 FOXJ3Q9UPW0 622 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 MED13Q9UHV7 2174 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 CBR3O75828 277 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 PATE4P0C8F1 98 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 PGA4P0DJD7 388 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 PGA3P0DJD8 388 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 ABOP16442 354 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 CSNK1A1P48729 337 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 DSCR4P56555 118 aaPredicted RBP9.89□□□□□ -0.83
TCOF1-203ENST00000394269 TAS2R20P59543 309 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 ROM1Q03395 351 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 TMEM255AQ5JRV8 349 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 TEX30Q5JUR7 227 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 FAM205BPQ63HN1 556 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 GLT8D1Q68CQ7 371 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms