RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 A3GALT2U3KPV4 340 aa17.27■□□□□ 0.35
CCM2-202ENST00000381112 CST2P09228 141 aa17.26■□□□□ 0.35
CCM2-202ENST00000381112 B4GALT1P15291 398 aa17.26■□□□□ 0.35
CCM2-202ENST00000381112 CALRP27797 417 aaKnown RBP17.26■□□□□ 0.35
CCM2-202ENST00000381112 SOX6P35712 828 aa17.26■□□□□ 0.35
CCM2-202ENST00000381112 MMP16P51512 607 aa17.26■□□□□ 0.35
CCM2-202ENST00000381112 MXD1Q05195 221 aa17.26■□□□□ 0.35
CCM2-202ENST00000381112 ZNF404Q494X3 552 aa17.26■□□□□ 0.35
CCM2-202ENST00000381112 NRN1LQ496H8 165 aa17.26■□□□□ 0.35
CCM2-202ENST00000381112 PAMR1Q6UXH9 720 aa17.26■□□□□ 0.35
CCM2-202ENST00000381112 ZNF100Q8IYN0 542 aa17.26■□□□□ 0.35
CCM2-202ENST00000381112 SLC22A24Q8N4F4 322 aa17.26■□□□□ 0.35
CCM2-202ENST00000381112 MCFD2Q8NI22 146 aa17.26■□□□□ 0.35
CCM2-202ENST00000381112 WNT2BQ93097 391 aa17.26■□□□□ 0.35
CCM2-202ENST00000381112 OR14A2Q96R54 314 aa17.26■□□□□ 0.35
CCM2-202ENST00000381112 SH3GL3Q99963 347 aa17.26■□□□□ 0.35
CCM2-202ENST00000381112 TPK1Q9H3S4 243 aa17.26■□□□□ 0.35
CCM2-202ENST00000381112 DDX28Q9NUL7 540 aaKnown RBP17.26■□□□□ 0.35
CCM2-202ENST00000381112 SLC22A13Q9Y226 551 aa17.26■□□□□ 0.35
CCM2-202ENST00000381112 BOD1L1Q8NFC6 3051 aa17.25■□□□□ 0.35
CCM2-202ENST00000381112 ZNF587BE7ETH6 402 aa17.25■□□□□ 0.35
CCM2-202ENST00000381112 RORCP51449 518 aa17.25■□□□□ 0.35
CCM2-202ENST00000381112 KRTCAP3Q53RY4 240 aa17.25■□□□□ 0.35
CCM2-202ENST00000381112 ZNF544Q6NX49 715 aa17.25■□□□□ 0.35
CCM2-202ENST00000381112 ZNF676Q8N7Q3 588 aa17.25■□□□□ 0.35
CCM2-202ENST00000381112 PHYHIPQ92561 330 aa17.25■□□□□ 0.35
CCM2-202ENST00000381112 COMMD4Q9H0A8 199 aa17.25■□□□□ 0.35
CCM2-202ENST00000381112 G6PC2Q9NQR9 355 aa17.25■□□□□ 0.35
CCM2-202ENST00000381112 FAM206AQ9NX38 181 aa17.25■□□□□ 0.35
CCM2-202ENST00000381112 TUBD1Q9UJT1 453 aa17.25■□□□□ 0.35
CCM2-202ENST00000381112 TMEM269A0A1B0GVZ9 245 aa17.24■□□□□ 0.35
CCM2-202ENST00000381112 CASKO14936 926 aa17.24■□□□□ 0.35
CCM2-202ENST00000381112 UCHL1P09936 223 aa17.24■□□□□ 0.35
CCM2-202ENST00000381112 PEX19P40855 299 aa17.24■□□□□ 0.35
CCM2-202ENST00000381112 MTNR1BP49286 362 aa17.24■□□□□ 0.35
CCM2-202ENST00000381112 GUSBP1Q15486 140 aa17.24■□□□□ 0.35
CCM2-202ENST00000381112 ZNF829Q3KNS6 432 aaPredicted RBP17.24■□□□□ 0.35
CCM2-202ENST00000381112 LINC00299Q6ZSB3 139 aa17.24■□□□□ 0.35
CCM2-202ENST00000381112 RDH10Q8IZV5 341 aa17.24■□□□□ 0.35
CCM2-202ENST00000381112 PPP1R14AQ96A00 147 aa17.24■□□□□ 0.35
CCM2-202ENST00000381112 MMP27Q9H306 513 aa17.24■□□□□ 0.35
CCM2-202ENST00000381112 NIPAL2Q9H841 368 aa17.24■□□□□ 0.35
CCM2-202ENST00000381112 GTF2A1LQ9UNN4 478 aa17.24■□□□□ 0.35
CCM2-202ENST00000381112 SPENQ96T58 3664 aaKnown RBP17.24■□□□□ 0.35
CCM2-202ENST00000381112 TRBV5-5A0A0J9YX44 114 aa17.24■□□□□ 0.35
CCM2-202ENST00000381112 ZNF879B4DU55 563 aa17.24■□□□□ 0.35
CCM2-202ENST00000381112 LOC110117498-PIK3R3F6TDL0 507 aa17.24■□□□□ 0.35
CCM2-202ENST00000381112 CCDC92Q53HC0 331 aaPredicted RBP17.24■□□□□ 0.35
CCM2-202ENST00000381112 ZNF585AQ6P3V2 769 aa17.24■□□□□ 0.35
CCM2-202ENST00000381112 KLHL24Q6TFL4 600 aa17.24■□□□□ 0.35
CCM2-202ENST00000381112 C9orf106Q8NAJ2 232 aa17.24■□□□□ 0.35
CCM2-202ENST00000381112 ZCCHC14Q8WYQ9 949 aaKnown RBP17.24■□□□□ 0.35
CCM2-202ENST00000381112 UPB1Q9UBR1 384 aa17.24■□□□□ 0.35
CCM2-202ENST00000381112 OR52A1Q9UKL2 312 aa17.24■□□□□ 0.35
CCM2-202ENST00000381112 CACNA1CQ13936 2221 aa17.23■□□□□ 0.35
CCM2-202ENST00000381112 CTSSP25774 331 aa17.23■□□□□ 0.35
CCM2-202ENST00000381112 OR3A2P47893 321 aa17.23■□□□□ 0.35
CCM2-202ENST00000381112 PSMA6P60900 246 aaKnown RBP17.23■□□□□ 0.35
CCM2-202ENST00000381112 ARF1P84077 181 aaKnown RBP17.23■□□□□ 0.35
CCM2-202ENST00000381112 TAF13Q15543 124 aa17.23■□□□□ 0.35
CCM2-202ENST00000381112 ODF4Q2M2E3 257 aa17.23■□□□□ 0.35
CCM2-202ENST00000381112 NSUN5P2Q63ZY6 315 aa17.23■□□□□ 0.35
CCM2-202ENST00000381112 ZNF813Q6ZN06 617 aa17.23■□□□□ 0.35
CCM2-202ENST00000381112 ZNF627Q7L945 461 aa17.23■□□□□ 0.35
CCM2-202ENST00000381112 OR6Q1Q8NGQ2 317 aa17.23■□□□□ 0.35
CCM2-202ENST00000381112 OR10AC1Q8NH08 325 aa17.23■□□□□ 0.35
CCM2-202ENST00000381112 C12orf49Q9H741 205 aa17.23■□□□□ 0.35
CCM2-202ENST00000381112 MALT1Q9UDY8 824 aa17.23■□□□□ 0.35
CCM2-202ENST00000381112 PRSS50Q9UI38 385 aa17.23■□□□□ 0.35
CCM2-202ENST00000381112 CHD8Q9HCK8 2581 aa17.23■□□□□ 0.35
CCM2-202ENST00000381112 A0A1W2PPK0 400 aa17.22■□□□□ 0.35
CCM2-202ENST00000381112 PIN1P1O15428 100 aa17.22■□□□□ 0.35
CCM2-202ENST00000381112 ARL6IP5O75915 188 aa17.22■□□□□ 0.35
CCM2-202ENST00000381112 HSD11B1P28845 292 aa17.22■□□□□ 0.35
CCM2-202ENST00000381112 MAGEB1P43366 347 aa17.22■□□□□ 0.35
CCM2-202ENST00000381112 FOXG1P55316 489 aaPredicted RBP17.22■□□□□ 0.35
CCM2-202ENST00000381112 GRB2P62993 217 aaKnown RBP17.22■□□□□ 0.35
CCM2-202ENST00000381112 FAPQ12884 760 aa17.22■□□□□ 0.35
CCM2-202ENST00000381112 HNRNPA0Q13151 305 aaKnown RBP17.22■□□□□ 0.35
CCM2-202ENST00000381112 Q499Y3 187 aa17.22■□□□□ 0.35
CCM2-202ENST00000381112 ELFN2Q5R3F8 820 aa17.22■□□□□ 0.35
CCM2-202ENST00000381112 FAM214BQ7L5A3 538 aa17.22■□□□□ 0.35
CCM2-202ENST00000381112 SYT9Q86SS6 491 aa17.22■□□□□ 0.35
CCM2-202ENST00000381112 SKA3Q8IX90 412 aa17.22■□□□□ 0.35
CCM2-202ENST00000381112 GCNT2Q8N0V5 402 aa17.22■□□□□ 0.35
CCM2-202ENST00000381112 UBE2J2Q8N2K1 259 aa17.22■□□□□ 0.35
CCM2-202ENST00000381112 GPR148Q8TDV2 347 aa17.22■□□□□ 0.35
CCM2-202ENST00000381112 DERL3Q96Q80 235 aa17.22■□□□□ 0.35
CCM2-202ENST00000381112 NOX4Q9NPH5 578 aa17.22■□□□□ 0.35
CCM2-202ENST00000381112 SLC5A6Q9Y289 635 aa17.22■□□□□ 0.35
CCM2-202ENST00000381112 PHF3Q92576 2039 aaKnown RBP17.22■□□□□ 0.35
CCM2-202ENST00000381112 TRAV1-2A0A0B4J238 106 aa17.22■□□□□ 0.35
CCM2-202ENST00000381112 SMIM30A4D0T7 59 aa17.22■□□□□ 0.35
CCM2-202ENST00000381112 ACOD1A6NK06 481 aa17.22■□□□□ 0.35
CCM2-202ENST00000381112 INHBBP09529 407 aa17.22■□□□□ 0.35
CCM2-202ENST00000381112 MYL9P24844 172 aa17.22■□□□□ 0.35
CCM2-202ENST00000381112 MOGQ16653 247 aa17.22■□□□□ 0.35
CCM2-202ENST00000381112 FBXW9Q5XUX1 488 aa17.22■□□□□ 0.35
CCM2-202ENST00000381112 CISD2Q8N5K1 135 aaKnown RBP17.22■□□□□ 0.35
CCM2-202ENST00000381112 OR51A4Q8NGJ6 313 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms