RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 FABP6P51161 128 aa16.17■□□□□ 0.18
SSU72-203ENST00000378725 UCP2P55851 309 aa16.17■□□□□ 0.18
SSU72-203ENST00000378725 SNRPGP62308 76 aaKnown RBP16.17■□□□□ 0.18
SSU72-203ENST00000378725 GALK2Q01415 458 aa16.17■□□□□ 0.18
SSU72-203ENST00000378725 RSPO1Q2MKA7 263 aaPredicted RBP16.17■□□□□ 0.18
SSU72-203ENST00000378725 KRTAP27-1Q3LI81 207 aa16.17■□□□□ 0.18
SSU72-203ENST00000378725 SHFQ7M4L6 423 aa16.17■□□□□ 0.18
SSU72-203ENST00000378725 DTX2Q86UW9 622 aa16.17■□□□□ 0.18
SSU72-203ENST00000378725 ERI1Q8IV48 349 aaKnown RBP16.17■□□□□ 0.18
SSU72-203ENST00000378725 OR10S1Q8NGN2 331 aa16.17■□□□□ 0.18
SSU72-203ENST00000378725 FAM81AQ8TBF8 368 aa16.17■□□□□ 0.18
SSU72-203ENST00000378725 TMEM171Q8WVE6 324 aa16.17■□□□□ 0.18
SSU72-203ENST00000378725 HAO2Q9NYQ3 351 aa16.17■□□□□ 0.18
SSU72-203ENST00000378725 GMPPBQ9Y5P6 360 aa16.17■□□□□ 0.18
SSU72-203ENST00000378725 ABCA4P78363 2273 aa16.17■□□□□ 0.18
SSU72-203ENST00000378725 CENPEQ02224 2701 aa16.17■□□□□ 0.18
SSU72-203ENST00000378725 CACNA1DQ01668 2161 aa16.16■□□□□ 0.18
SSU72-203ENST00000378725 SPARCP09486 303 aa16.16■□□□□ 0.18
SSU72-203ENST00000378725 CCNOP22674 350 aa16.16■□□□□ 0.18
SSU72-203ENST00000378725 WNT5AP41221 380 aa16.16■□□□□ 0.18
SSU72-203ENST00000378725 RAD52P43351 418 aa16.16■□□□□ 0.18
SSU72-203ENST00000378725 RPS7P62081 194 aaKnown RBP16.16■□□□□ 0.18
SSU72-203ENST00000378725 ECH1Q13011 328 aa16.16■□□□□ 0.18
SSU72-203ENST00000378725 SNTB2Q13425 540 aaKnown RBP16.16■□□□□ 0.18
SSU72-203ENST00000378725 KEAP1Q14145 624 aa16.16■□□□□ 0.18
SSU72-203ENST00000378725 GGTLC2Q14390 218 aa16.16■□□□□ 0.18
SSU72-203ENST00000378725 ADIPOQQ15848 244 aa16.16■□□□□ 0.18
SSU72-203ENST00000378725 MST1LQ2TV78 715 aa16.16■□□□□ 0.18
SSU72-203ENST00000378725 DCXRQ7Z4W1 244 aa16.16■□□□□ 0.18
SSU72-203ENST00000378725 CDH24Q86UP0 819 aa16.16■□□□□ 0.18
SSU72-203ENST00000378725 GID4Q8IVV7 300 aa16.16■□□□□ 0.18
SSU72-203ENST00000378725 ST7LQ8TDW4 575 aa16.16■□□□□ 0.18
SSU72-203ENST00000378725 C4orf45Q96LM5 186 aa16.16■□□□□ 0.18
SSU72-203ENST00000378725 DCLRE1CQ96SD1 692 aaKnown RBP16.16■□□□□ 0.18
SSU72-203ENST00000378725 FAIMQ9NVQ4 179 aa16.16■□□□□ 0.18
SSU72-203ENST00000378725 IMPAD1Q9NX62 359 aa16.16■□□□□ 0.18
SSU72-203ENST00000378725 EIF3KQ9UBQ5 218 aaKnown RBP16.16■□□□□ 0.18
SSU72-203ENST00000378725 PLEKHA6Q9Y2H5 1048 aa16.16■□□□□ 0.18
SSU72-203ENST00000378725 APCP25054 2843 aa16.16■□□□□ 0.18
SSU72-203ENST00000378725 HRNRQ86YZ3 2850 aaPredicted RBP16.16■□□□□ 0.18
SSU72-203ENST00000378725 SLC22A31A6NKX4 558 aa16.15■□□□□ 0.18
SSU72-203ENST00000378725 VSTM5A8MXK1 200 aa16.15■□□□□ 0.18
SSU72-203ENST00000378725 RRP9O43818 475 aaKnown RBP16.15■□□□□ 0.18
SSU72-203ENST00000378725 SELENOFO60613 162 aa16.15■□□□□ 0.18
SSU72-203ENST00000378725 GABRB1P18505 474 aa16.15■□□□□ 0.18
SSU72-203ENST00000378725 DNASE1P24855 282 aa16.15■□□□□ 0.18
SSU72-203ENST00000378725 LCN1P1Q5VSP4 162 aa16.15■□□□□ 0.18
SSU72-203ENST00000378725 AGAP6Q5VW22 663 aa16.15■□□□□ 0.18
SSU72-203ENST00000378725 TMEM154Q6P9G4 183 aa16.15■□□□□ 0.18
SSU72-203ENST00000378725 SLC16A9Q7RTY1 509 aa16.15■□□□□ 0.18
SSU72-203ENST00000378725 DPY19L4Q7Z388 723 aa16.15■□□□□ 0.18
SSU72-203ENST00000378725 C1orf174Q8IYL3 243 aa16.15■□□□□ 0.18
SSU72-203ENST00000378725 FBXL14Q8N1E6 418 aa16.15■□□□□ 0.18
SSU72-203ENST00000378725 MUC15Q8N387 334 aa16.15■□□□□ 0.18
SSU72-203ENST00000378725 ZNF555Q8NEP9 628 aa16.15■□□□□ 0.18
SSU72-203ENST00000378725 OR6N2Q8NGY6 317 aa16.15■□□□□ 0.18
SSU72-203ENST00000378725 NRG4Q8WWG1 115 aa16.15■□□□□ 0.18
SSU72-203ENST00000378725 IPCEF1Q8WWN9 437 aaPredicted RBP16.15■□□□□ 0.18
SSU72-203ENST00000378725 SLC7A6Q92536 515 aa16.15■□□□□ 0.18
SSU72-203ENST00000378725 PIGTQ969N2 578 aa16.15■□□□□ 0.18
SSU72-203ENST00000378725 MBD6Q96DN6 1003 aa16.15■□□□□ 0.18
SSU72-203ENST00000378725 ZNF582Q96NG8 517 aaPredicted RBP16.15■□□□□ 0.18
SSU72-203ENST00000378725 ATF6BQ99941 703 aa16.15■□□□□ 0.18
SSU72-203ENST00000378725 TRAF4Q9BUZ4 470 aaPredicted RBP16.15■□□□□ 0.18
SSU72-203ENST00000378725 BCL2L14Q9BZR8 327 aa16.15■□□□□ 0.18
SSU72-203ENST00000378725 DDX28Q9NUL7 540 aaKnown RBP16.15■□□□□ 0.18
SSU72-203ENST00000378725 LAMP3Q9UQV4 416 aa16.15■□□□□ 0.18
SSU72-203ENST00000378725 CADP27708 2225 aa16.15■□□□□ 0.18
SSU72-203ENST00000378725 OVOL3O00110 214 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 GPRIN2O60269 458 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 DBHP09172 617 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 OR4A8P0C604 315 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 FAM157BP0CG42 384 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 HTR1FP30939 366 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 SERPINF1P36955 418 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 RPS23P62266 143 aaKnown RBP16.14■□□□□ 0.17
SSU72-203ENST00000378725 ADARB1P78563 741 aaKnown RBP16.14■□□□□ 0.17
SSU72-203ENST00000378725 TMED1Q13445 227 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 EFNB3Q15768 340 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 OCLNQ16625 522 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 MSMPQ1L6U9 139 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 SWI5Q1ZZU3 235 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 C11orf71Q6IPW1 123 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 VHLLQ6RSH7 139 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 ARL9Q6T311 187 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 RHOUQ7L0Q8 258 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 ZNF101Q8IZC7 436 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 ZNF454Q8N9F8 522 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 RHOXF1Q8NHV9 184 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 OTOSQ8NHW6 89 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 CCL19Q99731 98 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 YIPF3Q9GZM5 350 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 ELOVL3Q9HB03 270 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 CBLN4Q9NTU7 201 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 TBCCD1Q9NVR7 557 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 WARS2Q9UGM6 360 aaKnown RBP16.14■□□□□ 0.17
SSU72-203ENST00000378725 CMAHPQ9Y471 501 aa16.14■□□□□ 0.17
SSU72-203ENST00000378725 SETXQ7Z333 2677 aaKnown RBP16.13■□□□□ 0.17
SSU72-203ENST00000378725 TMEM129A0AVI4 362 aa16.13■□□□□ 0.17
SSU72-203ENST00000378725 MPZL2O60487 215 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms