RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	ANGPTL7	O43827	346 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	OR7C1	O76099	320 aa	Predicted RBP	12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	DCTN2	Q13561	401 aa	Known RBP	12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	RSU1	Q15404	277 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	PXK	Q7Z7A4	578 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	LSMEM1	Q8N8F7	131 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	ANGPTL4	Q9BY76	406 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	OR10A2	Q9H208	303 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	IFT46	Q9NQC8	304 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	RGS9	O75916	674 aa	Predicted RBP	12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	NEURL1	O76050	574 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	OR3A3	P47888	321 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	OR3A2	P47893	321 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	PABPC1L2A	Q5JQF8	200 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	OR51D1	Q8NGF3	324 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	TMEM43	Q9BTV4	400 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	TAS2R5	Q9NYW4	299 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	NUFIP1	Q9UHK0	495 aa	Known RBP	12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	SLC22A1	O15245	554 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	HMGA2	P52926	109 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	ZNF121	P58317	390 aa	Predicted RBP	12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	TAS2R43	P59537	309 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	GLT8D1	Q68CQ7	371 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	TMEM53	Q6P2H8	277 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	NAA40	Q86UY6	237 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	C17orf47	Q8NEP4	570 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	PIGL	Q9Y2B2	252 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	USP34	Q70CQ2	3546 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	TGM6	O95932	706 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	PTHLH	P12272	177 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	CEBPE	Q15744	281 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	FAM205BP	Q63HN1	556 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	OR2T2	Q6IF00	324 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	OR10AC1	Q8NH08	325 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	IL1F10	Q8WWZ1	152 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	TIMP4	Q99727	224 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	ATF6B	Q99941	703 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	GABARAPL3	Q9BY60	117 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	SLC26A1	Q9H2B4	701 aa		12.03	□□□□□ -0.48
DDR1-225	ENST00000376568	SUMO3	P55854	103 aa	Predicted RBP	12.02	□□□□□ -0.48
DDR1-225	ENST00000376568	ZNF385C	Q66K41	422 aa	Predicted RBP	12.02	□□□□□ -0.48
DDR1-225	ENST00000376568	C5orf46	Q6UWT4	87 aa		12.02	□□□□□ -0.48
DDR1-225	ENST00000376568	UNQ6494/PRO21346	Q6UXR6	183 aa		12.02	□□□□□ -0.48
DDR1-225	ENST00000376568	LIPH	Q8WWY8	451 aa		12.02	□□□□□ -0.48
DDR1-225	ENST00000376568	SLC19A3	Q9BZV2	496 aa		12.02	□□□□□ -0.48
DDR1-225	ENST00000376568	DIABLO	Q9NR28	239 aa		12.02	□□□□□ -0.48
DDR1-225	ENST00000376568	KLK4	Q9Y5K2	254 aa		12.02	□□□□□ -0.48
DDR1-225	ENST00000376568	TRAV6	A0A075B6T7	132 aa		12.02	□□□□□ -0.49
DDR1-225	ENST00000376568		A0A087WZY1	265 aa		12.02	□□□□□ -0.49
DDR1-225	ENST00000376568	LOC107986453	A0A1B0GWG9	222 aa		12.02	□□□□□ -0.49
DDR1-225	ENST00000376568	FTCDNL1	E5RQL4	147 aa		12.02	□□□□□ -0.49
DDR1-225	ENST00000376568	SLC33A1	O00400	549 aa	Predicted RBP	12.02	□□□□□ -0.49
DDR1-225	ENST00000376568	HPGDS	O60760	199 aa		12.02	□□□□□ -0.49
DDR1-225	ENST00000376568	PSKH1	P11801	424 aa		12.02	□□□□□ -0.49
DDR1-225	ENST00000376568	TMEM81	Q6P7N7	255 aa		12.02	□□□□□ -0.49
DDR1-225	ENST00000376568	BRICD5	Q6PL45	260 aa		12.02	□□□□□ -0.49
DDR1-225	ENST00000376568	ZNF227	Q86WZ6	799 aa		12.02	□□□□□ -0.49
DDR1-225	ENST00000376568	FOXRED2	Q8IWF2	684 aa		12.02	□□□□□ -0.49
DDR1-225	ENST00000376568	NOXO1	Q8NFA2	376 aa		12.02	□□□□□ -0.49
DDR1-225	ENST00000376568	DUS3L	Q96G46	650 aa	Known RBP	12.02	□□□□□ -0.49
DDR1-225	ENST00000376568	AMELY	Q99218	206 aa		12.02	□□□□□ -0.49
DDR1-225	ENST00000376568	RSPO3	Q9BXY4	272 aa	Predicted RBP	12.02	□□□□□ -0.49
DDR1-225	ENST00000376568	CLDN25	C9JDP6	229 aa		12.02	□□□□□ -0.49
DDR1-225	ENST00000376568	ZIC3	O60481	467 aa		12.02	□□□□□ -0.49
DDR1-225	ENST00000376568	CDK5	Q00535	292 aa		12.02	□□□□□ -0.49
DDR1-225	ENST00000376568	THEM4	Q5T1C6	240 aa		12.02	□□□□□ -0.49
DDR1-225	ENST00000376568	VASH1	Q7L8A9	365 aa	Predicted RBP	12.02	□□□□□ -0.49
DDR1-225	ENST00000376568	SLC16A9	Q7RTY1	509 aa		12.02	□□□□□ -0.49
DDR1-225	ENST00000376568	NUFIP2	Q7Z417	695 aa	Known RBP	12.02	□□□□□ -0.49
DDR1-225	ENST00000376568	ZNF524	Q96C55	264 aa		12.02	□□□□□ -0.49
DDR1-225	ENST00000376568	LRRC46	Q96FV0	321 aa		12.02	□□□□□ -0.49
DDR1-225	ENST00000376568	CHRNA10	Q9GZZ6	450 aa		12.02	□□□□□ -0.49
DDR1-225	ENST00000376568	MYO9A	B2RTY4	2548 aa		12.02	□□□□□ -0.49
DDR1-225	ENST00000376568	MAP1A	P78559	2803 aa	Predicted RBP	12.01	□□□□□ -0.49
DDR1-225	ENST00000376568	CRYAA	P02489	173 aa		12.01	□□□□□ -0.49
DDR1-225	ENST00000376568	GLI4	P10075	376 aa		12.01	□□□□□ -0.49
DDR1-225	ENST00000376568	PITPNB	P48739	271 aa		12.01	□□□□□ -0.49
DDR1-225	ENST00000376568	GP2	P55259	537 aa	Known RBP	12.01	□□□□□ -0.49
DDR1-225	ENST00000376568	DYNC1I2	Q13409	638 aa	Known RBP	12.01	□□□□□ -0.49
DDR1-225	ENST00000376568	GPR50	Q13585	617 aa		12.01	□□□□□ -0.49
DDR1-225	ENST00000376568	GLYATL3	Q5SZD4	288 aa		12.01	□□□□□ -0.49
DDR1-225	ENST00000376568	MS4A15	Q8N5U1	240 aa		12.01	□□□□□ -0.49
DDR1-225	ENST00000376568	APH1B	Q8WW43	257 aa		12.01	□□□□□ -0.49
DDR1-225	ENST00000376568	RNF170	Q96K19	258 aa		12.01	□□□□□ -0.49
DDR1-225	ENST00000376568	NRIP3	Q9NQ35	241 aa		12.01	□□□□□ -0.49
DDR1-225	ENST00000376568	ANKRD30BL	A7E2S9	258 aa		12.01	□□□□□ -0.49
DDR1-225	ENST00000376568	SPRY3	O43610	288 aa		12.01	□□□□□ -0.49
DDR1-225	ENST00000376568	CD3G	P09693	182 aa		12.01	□□□□□ -0.49
DDR1-225	ENST00000376568	SMIM18	P0DKX4	95 aa		12.01	□□□□□ -0.49
DDR1-225	ENST00000376568	MST1	P26927	711 aa		12.01	□□□□□ -0.49
DDR1-225	ENST00000376568	SPIN3	Q5JUX0	258 aa		12.01	□□□□□ -0.49
DDR1-225	ENST00000376568	SFRP4	Q6FHJ7	346 aa	Predicted RBP	12.01	□□□□□ -0.49
DDR1-225	ENST00000376568	PHC2	Q8IXK0	858 aa		12.01	□□□□□ -0.49
DDR1-225	ENST00000376568	NPEPL1	Q8NDH3	523 aa		12.01	□□□□□ -0.49
DDR1-225	ENST00000376568	HGD	Q93099	445 aa		12.01	□□□□□ -0.49
DDR1-225	ENST00000376568	ST6GALNAC5	Q9BVH7	336 aa		12.01	□□□□□ -0.49
DDR1-225	ENST00000376568	ACTR6	Q9GZN1	396 aa		12.01	□□□□□ -0.49
DDR1-225	ENST00000376568	ENAM	Q9NRM1	1142 aa		12.01	□□□□□ -0.49
DDR1-225	ENST00000376568	PAQR5	Q9NXK6	330 aa	Predicted RBP	12.01	□□□□□ -0.49

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