RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 TP53TG5Q9Y2B4 290 aa23.16■■□□□ 1.3
ATPAF1-202ENST00000371937 PEX16Q9Y5Y5 336 aa23.16■■□□□ 1.3
ATPAF1-202ENST00000371937 LAMA5O15230 3695 aa23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 TRAV1-2A0A0B4J238 106 aa23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 SHISA3A0PJX4 238 aa23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 WISP2O76076 250 aa23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 INHBBP09529 407 aa23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 HSD11B1P28845 292 aa23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 S100A5P33763 92 aa23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 MFGE8Q08431 387 aaPredicted RBP23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 NRN1LQ496H8 165 aa23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 IL17RDQ8NFM7 739 aa23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 AP3S1Q92572 193 aa23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 SLC7A10Q9NS82 523 aa23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 CLCF1Q9UBD9 225 aa23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 IQCMA0A1B0GVH7 501 aa23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 RPL36A-HNRNPH2H7BZ11 118 aa23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 CST2P09228 141 aa23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 GRB2P62993 217 aaKnown RBP23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 HIST1H3AP68431 136 aa23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 HSD17B12Q53GQ0 312 aa23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 HIST2H3PS2Q5TEC6 136 aa23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 HIST2H3AQ71DI3 136 aa23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 ZNF100Q8IYN0 542 aa23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 SNRNP27Q8WVK2 155 aaKnown RBP23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 GMPPAQ96IJ6 420 aaPredicted RBP23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 KCNS3Q9BQ31 491 aa23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 PNRC2Q9NPJ4 139 aaKnown RBP23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 OR52A1Q9UKL2 312 aa23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 SLC22A13Q9Y226 551 aa23.15■■□□□ 1.3
ATPAF1-202ENST00000371937 MGAQ8IWI9 3026 aa23.14■■□□□ 1.3
ATPAF1-202ENST00000371937 TRBV5-5A0A0J9YX44 114 aa23.14■■□□□ 1.29
ATPAF1-202ENST00000371937 ZNF587BE7ETH6 402 aa23.14■■□□□ 1.29
ATPAF1-202ENST00000371937 OCM2P0CE71 109 aa23.14■■□□□ 1.29
ATPAF1-202ENST00000371937 DYNC1I2Q13409 638 aaKnown RBP23.14■■□□□ 1.29
ATPAF1-202ENST00000371937 HMG20AQ9NP66 347 aa23.14■■□□□ 1.29
ATPAF1-202ENST00000371937 UPB1Q9UBR1 384 aa23.14■■□□□ 1.29
ATPAF1-202ENST00000371937 AHRRA9YTQ3 701 aa23.13■■□□□ 1.29
ATPAF1-202ENST00000371937 IGHV3-9P01782 118 aa23.13■■□□□ 1.29
ATPAF1-202ENST00000371937 AGTR1P30556 359 aa23.13■■□□□ 1.29
ATPAF1-202ENST00000371937 ZNF704Q6ZNC4 412 aaPredicted RBP23.13■■□□□ 1.29
ATPAF1-202ENST00000371937 SLC22A24Q8N4F4 322 aa23.13■■□□□ 1.29
ATPAF1-202ENST00000371937 DERL3Q96Q80 235 aa23.13■■□□□ 1.29
ATPAF1-202ENST00000371937 TRIB1Q96RU8 372 aa23.13■■□□□ 1.29
ATPAF1-202ENST00000371937 G6PC2Q9NQR9 355 aa23.13■■□□□ 1.29
ATPAF1-202ENST00000371937 DDX28Q9NUL7 540 aaKnown RBP23.13■■□□□ 1.29
ATPAF1-202ENST00000371937 PLEKHB1Q9UF11 243 aaPredicted RBP23.13■■□□□ 1.29
ATPAF1-202ENST00000371937 A0A087WV48 116 aa23.12■■□□□ 1.29
ATPAF1-202ENST00000371937 CFL1P23528 166 aaKnown RBP23.12■■□□□ 1.29
ATPAF1-202ENST00000371937 ODF4Q2M2E3 257 aa23.12■■□□□ 1.29
ATPAF1-202ENST00000371937 NUFIP2Q7Z417 695 aaKnown RBP23.12■■□□□ 1.29
ATPAF1-202ENST00000371937 CROCCP3Q8IVE0 287 aa23.12■■□□□ 1.29
ATPAF1-202ENST00000371937 WACQ9BTA9 647 aa23.12■■□□□ 1.29
ATPAF1-202ENST00000371937 NOX4Q9NPH5 578 aa23.12■■□□□ 1.29
ATPAF1-202ENST00000371937 FAM206AQ9NX38 181 aa23.12■■□□□ 1.29
ATPAF1-202ENST00000371937 A0A1W2PPK0 400 aa23.12■■□□□ 1.29
ATPAF1-202ENST00000371937 CLDN25C9JDP6 229 aa23.12■■□□□ 1.29
ATPAF1-202ENST00000371937 TAF4O00268 1085 aa23.12■■□□□ 1.29
ATPAF1-202ENST00000371937 FARS2O95363 451 aaKnown RBP23.12■■□□□ 1.29
ATPAF1-202ENST00000371937 RAF1P04049 648 aa23.12■■□□□ 1.29
ATPAF1-202ENST00000371937 B4GALT1P15291 398 aa23.12■■□□□ 1.29
ATPAF1-202ENST00000371937 PSMA6P60900 246 aaKnown RBP23.12■■□□□ 1.29
ATPAF1-202ENST00000371937 SF3B4Q15427 424 aaKnown RBP eCLIP23.12■■□□□ 1.29
ATPAF1-202ENST00000371937 BCL2L15Q5TBC7 163 aa23.12■■□□□ 1.29
ATPAF1-202ENST00000371937 FAM180AQ6UWF9 173 aa23.12■■□□□ 1.29
ATPAF1-202ENST00000371937 SYT9Q86SS6 491 aa23.12■■□□□ 1.29
ATPAF1-202ENST00000371937 RDH10Q8IZV5 341 aa23.12■■□□□ 1.29
ATPAF1-202ENST00000371937 OR5M9Q8NGP3 310 aa23.12■■□□□ 1.29
ATPAF1-202ENST00000371937 FBXO17Q96EF6 278 aa23.12■■□□□ 1.29
ATPAF1-202ENST00000371937 GPR137Q96N19 417 aa23.12■■□□□ 1.29
ATPAF1-202ENST00000371937 MOB1AQ9H8S9 216 aa23.12■■□□□ 1.29
ATPAF1-202ENST00000371937 PRRC2CQ9Y520 2896 aaKnown RBP23.12■■□□□ 1.29
ATPAF1-202ENST00000371937 SMIM30A4D0T7 59 aa23.11■■□□□ 1.29
ATPAF1-202ENST00000371937 ACOD1A6NK06 481 aa23.11■■□□□ 1.29
ATPAF1-202ENST00000371937 SS18L1O75177 396 aaPredicted RBP23.11■■□□□ 1.29
ATPAF1-202ENST00000371937 ISG15P05161 165 aa23.11■■□□□ 1.29
ATPAF1-202ENST00000371937 PCBD1P61457 104 aa23.11■■□□□ 1.29
ATPAF1-202ENST00000371937 CXADRP78310 365 aa23.11■■□□□ 1.29
ATPAF1-202ENST00000371937 ZNF813Q6ZN06 617 aa23.11■■□□□ 1.29
ATPAF1-202ENST00000371937 ABHD12BQ7Z5M8 362 aaPredicted RBP23.11■■□□□ 1.29
ATPAF1-202ENST00000371937 ATF6BQ99941 703 aa23.11■■□□□ 1.29
ATPAF1-202ENST00000371937 SH3GL3Q99963 347 aa23.11■■□□□ 1.29
ATPAF1-202ENST00000371937 SMURF1Q9HCE7 757 aa23.11■■□□□ 1.29
ATPAF1-202ENST00000371937 AKIP1Q9NQ31 210 aa23.11■■□□□ 1.29
ATPAF1-202ENST00000371937 UBCP0CG48 685 aaKnown RBP23.1■■□□□ 1.29
ATPAF1-202ENST00000371937 SRMP19623 302 aa23.1■■□□□ 1.29
ATPAF1-202ENST00000371937 CTSSP25774 331 aa23.1■■□□□ 1.29
ATPAF1-202ENST00000371937 CAV3P56539 151 aa23.1■■□□□ 1.29
ATPAF1-202ENST00000371937 SCRN3Q0VDG4 424 aa23.1■■□□□ 1.29
ATPAF1-202ENST00000371937 ZNF846Q147U1 533 aa23.1■■□□□ 1.29
ATPAF1-202ENST00000371937 KRTCAP3Q53RY4 240 aa23.1■■□□□ 1.29
ATPAF1-202ENST00000371937 ELFN2Q5R3F8 820 aa23.1■■□□□ 1.29
ATPAF1-202ENST00000371937 TMEM244Q5VVB8 128 aa23.1■■□□□ 1.29
ATPAF1-202ENST00000371937 UBE2J2Q8N2K1 259 aa23.1■■□□□ 1.29
ATPAF1-202ENST00000371937 WNT2BQ93097 391 aa23.1■■□□□ 1.29
ATPAF1-202ENST00000371937 PPP1R14AQ96A00 147 aa23.1■■□□□ 1.29
ATPAF1-202ENST00000371937 WDR12Q9GZL7 423 aaKnown RBP23.1■■□□□ 1.29
ATPAF1-202ENST00000371937 SLC5A6Q9Y289 635 aa23.1■■□□□ 1.29
ATPAF1-202ENST00000371937 RAB3BP20337 219 aa23.1■■□□□ 1.29
ATPAF1-202ENST00000371937 TSEN15Q8WW01 171 aaKnown RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms