RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 SLC22A11Q9NSA0 550 aa20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 FAM221AA4D161 298 aa20.18■□□□□ 0.82
TM9SF3-201ENST00000371142 K7EQM0 130 aa20.18■□□□□ 0.82
TM9SF3-201ENST00000371142 M0R1B8 84 aa20.18■□□□□ 0.82
TM9SF3-201ENST00000371142 RPS27P42677 84 aaKnown RBP20.18■□□□□ 0.82
TM9SF3-201ENST00000371142 SLC6A12P48065 614 aa20.18■□□□□ 0.82
TM9SF3-201ENST00000371142 TMEM240Q5SV17 173 aa20.18■□□□□ 0.82
TM9SF3-201ENST00000371142 CMC2Q9NRP2 79 aa20.18■□□□□ 0.82
TM9SF3-201ENST00000371142 TNFSF11O14788 317 aa20.18■□□□□ 0.82
TM9SF3-201ENST00000371142 RAD52P43351 418 aa20.18■□□□□ 0.82
TM9SF3-201ENST00000371142 RFX2P48378 723 aa20.18■□□□□ 0.82
TM9SF3-201ENST00000371142 EMDP50402 254 aa20.18■□□□□ 0.82
TM9SF3-201ENST00000371142 ANKRD34AQ69YU3 496 aa20.18■□□□□ 0.82
TM9SF3-201ENST00000371142 THNSL2Q86YJ6 484 aa20.18■□□□□ 0.82
TM9SF3-201ENST00000371142 LAT2Q9GZY6 243 aa20.18■□□□□ 0.82
TM9SF3-201ENST00000371142 ZCCHC4Q9H5U6 513 aa20.18■□□□□ 0.82
TM9SF3-201ENST00000371142 SEH1LQ96EE3 360 aa20.18■□□□□ 0.82
TM9SF3-201ENST00000371142 C4AP0C0L4 1744 aa20.18■□□□□ 0.82
TM9SF3-201ENST00000371142 HEXAP06865 529 aa20.18■□□□□ 0.82
TM9SF3-201ENST00000371142 FAM185AQ8N0U4 392 aa20.18■□□□□ 0.82
TM9SF3-201ENST00000371142 DDOQ99489 341 aa20.18■□□□□ 0.82
TM9SF3-201ENST00000371142 MENTQ9BUN1 341 aa20.18■□□□□ 0.82
TM9SF3-201ENST00000371142 LTB4R2Q9NPC1 389 aa20.18■□□□□ 0.82
TM9SF3-201ENST00000371142 XRCC3O43542 346 aa20.18■□□□□ 0.82
TM9SF3-201ENST00000371142 Q6ZRG5 221 aa20.18■□□□□ 0.82
TM9SF3-201ENST00000371142 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.18■□□□□ 0.82
TM9SF3-201ENST00000371142 NME2P1O60361 137 aa20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 FAM157BP0CG42 384 aa20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 PLXDC2Q6UX71 529 aa20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 LINC01465Q8N7H1 131 aa20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 SCARB1Q8WTV0 552 aa20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 DEFA6Q01524 100 aa20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 TIMD4Q96H15 378 aa20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 PHF7Q9BWX1 381 aaPredicted RBP20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 MYO9BQ13459 2157 aa20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 RFC3P40938 356 aa20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 GP2P55259 537 aaKnown RBP20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 DOC2BQ14184 412 aa20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 THEM4Q5T1C6 240 aa20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 OR2AE1Q8NHA4 323 aa20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 C16orf52Q8NHV5 167 aa20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 SLCO4A1Q96BD0 722 aa20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 NTN4Q9HB63 628 aa20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 SH2D1BO14796 132 aa20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 FKBP2P26885 142 aaKnown RBP20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 EMP3P54852 163 aa20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 FAAP20Q6NZ36 180 aa20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 TMEM104Q8NE00 496 aa20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 OR10X1Q8NGY0 326 aa20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 RDH5Q92781 318 aa20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 GPR84Q9NQS5 396 aa20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 MED29Q9NX70 200 aa20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 SDK1Q7Z5N4 2213 aa20.17■□□□□ 0.82
TM9SF3-201ENST00000371142 SDCBPO00560 298 aaPredicted RBP20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 OR4Q3Q8NH05 313 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 REEP6Q96HR9 211 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 TXNDC12O95881 172 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 SMIM18P0DKX4 95 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 OTUD1Q5VV17 481 aaPredicted RBP20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 MYEOVQ96EZ4 313 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 RAB19A4D1S5 217 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 TMEM235A6NFC5 223 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 M0R135 149 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 GPX5O75715 221 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 OR2J2O76002 312 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 YIF1AO95070 293 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 HNF1AP20823 631 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 OR10A3P58181 314 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 BCL7CQ8WUZ0 217 aaPredicted RBP20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 ZNF799Q96GE5 643 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 SHISA7A6NL88 538 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 EMC4Q5J8M3 183 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 LAIR1Q6GTX8 287 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 OR13C8Q8NGS7 320 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 SLC7A6Q92536 515 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 FN3KRPQ9HA64 309 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 MED9Q9NWA0 146 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 SLC23A1Q9UHI7 598 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 A0A0B4J203 849 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 GLRA1P23415 457 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 TGFBR1P36897 503 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 RAB13P51153 203 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 DBX2Q6ZNG2 339 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 LHFPL2Q6ZUX7 228 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 KCNG2Q9UJ96 466 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 FLVCR1Q9Y5Y0 555 aa20.16■□□□□ 0.82
TM9SF3-201ENST00000371142 PRRG2O14669 202 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 ABCD4O14678 606 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 SUB1P53999 127 aaKnown RBP eCLIP20.15■□□□□ 0.824e-10■■■■□ 26
TM9SF3-201ENST00000371142 ACVR1Q04771 509 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 CISD2Q8N5K1 135 aaKnown RBP20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 ARIH2OSQ8N7S6 290 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 SLC35E1Q96K37 410 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 BTBD17A6NE02 478 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 F2RP25116 425 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 RPS23P62266 143 aaKnown RBP20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 TOR2AQ5JU69 321 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 CREB3L2Q70SY1 520 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 ETFBKMTQ8IXQ9 262 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 FAM26EQ8N5C1 309 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms