RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 EGR1P18146 543 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 RAB3BP20337 219 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 SHC1P29353 583 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 PTGS2P35354 604 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 THBS2P35442 1172 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 EVX1P49640 407 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 SSR4P51571 173 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 PSMD7P51665 324 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 CCR9P51686 369 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 HCCSP53701 268 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 MLF1P58340 268 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 LCN6P62502 163 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 ASAH1Q13510 395 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 ALKBH1Q13686 389 aaKnown RBP7.27□□□□□ -1.25
CD44-205ENST00000352818 INSL4Q14641 139 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 PCK2Q16822 640 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 TEX30Q5JUR7 227 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 BICRALQ6AI39 1079 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 LYPD4Q6UWN0 246 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 FAM131AQ6UXB0 335 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 NR2C2APQ86WQ0 139 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 LIX1LQ8IVB5 337 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 PM20D2Q8IYS1 436 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 ZNF511Q8NB15 262 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 DRAXINQ8NBI3 349 aaPredicted RBP7.27□□□□□ -1.25
CD44-205ENST00000352818 OR4K17Q8NGC6 315 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 OR6N2Q8NGY6 317 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 OTOSQ8NHW6 89 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 PAQR8Q8TEZ7 354 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 SMAP2Q8WU79 429 aaPredicted RBP7.27□□□□□ -1.25
CD44-205ENST00000352818 CHAC2Q8WUX2 184 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 TMEM41AQ96HV5 264 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 ARL5BQ96KC2 179 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 CMTM3Q96MX0 182 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 TSSK2Q96PF2 358 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 OR8B4Q96RC9 309 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 KCNK17Q96T54 332 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 NPAS1Q99742 590 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 PPIL3Q9H2H8 161 aaKnown RBP7.27□□□□□ -1.25
CD44-205ENST00000352818 PPP1R3EQ9H7J1 279 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 PTGES2Q9H7Z7 377 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 CYSLTR2Q9NS75 346 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 ABRACLQ9P1F3 81 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 RABL2AQ9UBK7 228 aaPredicted RBP7.27□□□□□ -1.25
CD44-205ENST00000352818 LAMP5Q9UJQ1 280 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 TBC1D24Q9ULP9 559 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 RABL2BQ9UNT1 228 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 HDGFL3Q9Y3E1 203 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 ABCA1O95477 2261 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 USF3Q68DE3 2245 aa7.27□□□□□ -1.25
CD44-205ENST00000352818 TMEM212A6NML5 194 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 SNPHO15079 494 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 HPGDSO60760 199 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 ZNF254O75437 659 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 NCR1O76036 304 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 PMS2P2O95744 297 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 OR8G3PP0DMU2 310 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 ZNF17P17021 662 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 AHCYP23526 432 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 KIR2DL3P43628 341 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 P2RY4P51582 365 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 CAV3P56539 151 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 GLO1Q04760 184 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 RASGEF1BQ0VAM2 473 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 DBPQ10586 325 aaPredicted RBP7.26□□□□□ -1.25
CD44-205ENST00000352818 DAZAP2Q15038 168 aaPredicted RBP7.26□□□□□ -1.25
CD44-205ENST00000352818 OR7A5Q15622 319 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 HSD17B12Q53GQ0 312 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 HACD4Q5VWC8 232 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 LIPNQ5VXI9 398 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 SLC18B1Q6NT16 456 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 ZNF544Q6NX49 715 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 H3F3CQ6NXT2 135 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 CNIH2Q6PI25 160 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 PRSS57Q6UWY2 283 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 BAIAP2L2Q6UXY1 529 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 NHLRC1Q6VVB1 395 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 SLC35D2Q76EJ3 337 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 PLCZ1Q86YW0 608 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 GHDCQ8N2G8 530 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 GTPBP8Q8N3Z3 284 aaPredicted RBP7.26□□□□□ -1.25
CD44-205ENST00000352818 YIPF7Q8N8F6 280 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 WDSUB1Q8N9V3 476 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 ROBO4Q8WZ75 1007 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 RGP1Q92546 391 aaPredicted RBP7.26□□□□□ -1.25
CD44-205ENST00000352818 ITPKCQ96DU7 683 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 MAP6Q96JE9 813 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 SGCZQ96LD1 299 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 ADAD1Q96M93 576 aaKnown RBP7.26□□□□□ -1.25
CD44-205ENST00000352818 DERL3Q96Q80 235 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 MRI1Q9BV20 369 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 ZNF160Q9HCG1 818 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 SRA1Q9HD15 236 aaKnown RBP7.26□□□□□ -1.25
CD44-205ENST00000352818 POLE4Q9NR33 117 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 KLHL9Q9P2J3 617 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 COMMD3Q9UBI1 195 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 VDAC3Q9Y277 283 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 KLHDC2Q9Y2U9 406 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 BIRC6Q9NR09 4857 aa7.26□□□□□ -1.25
CD44-205ENST00000352818 TRBV5-7A0A0A0MS05 114 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms