RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 NKD1Q969G9 470 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 SLC41A2Q96JW4 573 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 CMTM3Q96MX0 182 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 KCNK17Q96T54 332 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 POFUT1Q9H488 388 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 KCNK7Q9Y2U2 307 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 TMEM212A6NML5 194 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 RENP00797 406 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 PDGFAP04085 211 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 TACSTD2P09758 323 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 CD37P11049 281 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 GTF2F2P13984 249 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 FBLP22087 321 aaKnown RBP5.38□□□□□ -1.55
CLCN3-201ENST00000347613 LCN1P31025 176 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 POU3F1Q03052 451 aaPredicted RBP5.38□□□□□ -1.55
CLCN3-201ENST00000347613 NKPD1Q17RQ9 610 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 PHYHD1Q5SRE7 291 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 FDX2Q6P4F2 183 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 GUSBP11Q6P575 273 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 FAM220AQ7Z4H9 259 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 CD163Q86VB7 1156 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 OR10G3Q8NGC4 313 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 FGGYQ96C11 551 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 UCK1Q9HA47 277 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 VSIG4Q9Y279 399 aa5.38□□□□□ -1.55
CLCN3-201ENST00000347613 LOC107986453A0A1B0GWG9 222 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 ACOT7O00154 380 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 SLC17A2O00624 439 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 PDCD5O14737 125 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 MSTNO14793 375 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 TTRP02766 147 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 RLN1P04808 185 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 HIST1H2ABP04908 130 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 RAB40ALP0C0E4 278 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 SRFP11831 508 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 ABOP16442 354 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 AP2S1P53680 142 aaPredicted RBP5.37□□□□□ -1.55
CLCN3-201ENST00000347613 QRFPP83859 136 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 DHODHQ02127 395 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 IKZF1Q13422 519 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 TUSC1Q2TAM9 212 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 BEX5Q5H9J7 111 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 EMC4Q5J8M3 183 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 ATRAIDQ6UW56 229 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 HIST3H2AQ7L7L0 130 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 ZNF627Q7L945 461 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 KCTD20Q7Z5Y7 419 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 ANKRD37Q7Z713 158 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 CDH24Q86UP0 819 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 ZNF440Q8IYI8 595 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 ADAD2Q8NCV1 583 aaKnown RBP5.37□□□□□ -1.55
CLCN3-201ENST00000347613 TMEM104Q8NE00 496 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 OR1J2Q8NGS2 313 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 RAB40AQ8WXH6 277 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 ROBO4Q8WZ75 1007 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 HIST1H2ACQ93077 130 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 MSANTD3Q96H12 275 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 SLC25A44Q96H78 314 aaPredicted RBP5.37□□□□□ -1.55
CLCN3-201ENST00000347613 TMUB1Q9BVT8 246 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 CHRDQ9H2X0 955 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 FAM206AQ9NX38 181 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 COPZ2Q9P299 210 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 CSMD1Q96PZ7 3565 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 MGAQ8IWI9 3026 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 A0A1W2PQD3 144 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 OR14I1A6ND48 311 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 A8MVM7 634 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 I3L521 148 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 SHOXO15266 292 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 SSX5O60225 188 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 RBBP9O75884 186 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 NMBP08949 121 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 ACSM4P0C7M7 580 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 RRASP10301 218 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 GP1BBP13224 206 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 ACHEP22303 614 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 MNDAP41218 407 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 POLR2HP52434 150 aaKnown RBP5.37□□□□□ -1.55
CLCN3-201ENST00000347613 ARHGDIBP52566 201 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 PNLIPRP2P54317 469 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 FAM74A1Q5RGS3 127 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 PXDC1Q5TGL8 231 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 ZNF813Q6ZN06 617 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 MAMDC2Q7Z304 686 aaPredicted RBP5.37□□□□□ -1.55
CLCN3-201ENST00000347613 C1QL2Q7Z5L3 287 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 GABRG1Q8N1C3 465 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 OR52N5Q8NH56 324 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 NUDCD2Q8WVJ2 157 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 C11orf40Q8WZ69 217 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 PHYHIPQ92561 330 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 ZDHHC12Q96GR4 267 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 SEC22AQ96IW7 307 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 CMKLR1Q99788 373 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 TGIF2Q9GZN2 237 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 RAB33BQ9H082 229 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 SYNDIG1Q9H7V2 258 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 COLQQ9Y215 455 aaPredicted RBP5.37□□□□□ -1.55
CLCN3-201ENST00000347613 FARSAQ9Y285 508 aaKnown RBP5.37□□□□□ -1.55
CLCN3-201ENST00000347613 RELNP78509 3460 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 A0A1B0GTI1 187 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms