RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 THEM4Q5T1C6 240 aa13.7□□□□□ -0.22
MBD1-203ENST00000339998 OR13C3Q8NGS6 347 aa13.7□□□□□ -0.22
MBD1-203ENST00000339998 OR6F1Q8NGZ6 308 aa13.7□□□□□ -0.22
MBD1-203ENST00000339998 RNF133Q8WVZ7 376 aa13.7□□□□□ -0.22
MBD1-203ENST00000339998 LOXL4Q96JB6 756 aa13.7□□□□□ -0.22
MBD1-203ENST00000339998 SPACA5Q96QH8 159 aa13.7□□□□□ -0.22
MBD1-203ENST00000339998 LRFN1Q9P244 771 aa13.7□□□□□ -0.22
MBD1-203ENST00000339998 ALG5Q9Y673 324 aa13.7□□□□□ -0.22
MBD1-203ENST00000339998 CENPBD1B2RD01 187 aa13.7□□□□□ -0.22
MBD1-203ENST00000339998 E9PLN8 166 aa13.7□□□□□ -0.22
MBD1-203ENST00000339998 HPP00738 406 aa13.7□□□□□ -0.22
MBD1-203ENST00000339998 ITGA3P26006 1051 aa13.7□□□□□ -0.22
MBD1-203ENST00000339998 CD96P40200 585 aa13.7□□□□□ -0.22
MBD1-203ENST00000339998 CYB561P49447 251 aa13.7□□□□□ -0.22
MBD1-203ENST00000339998 MAP2K6P52564 334 aa13.7□□□□□ -0.22
MBD1-203ENST00000339998 PCK2Q16822 640 aa13.7□□□□□ -0.22
MBD1-203ENST00000339998 OR6N1Q8NGY5 312 aa13.7□□□□□ -0.22
MBD1-203ENST00000339998 SLC25A43Q8WUT9 341 aaPredicted RBP13.7□□□□□ -0.22
MBD1-203ENST00000339998 LIN37Q96GY3 246 aaPredicted RBP13.7□□□□□ -0.22
MBD1-203ENST00000339998 ZNF845Q96IR2 970 aaPredicted RBP13.7□□□□□ -0.22
MBD1-203ENST00000339998 CYYR1Q96J86 154 aa13.7□□□□□ -0.22
MBD1-203ENST00000339998 RANGRFQ9HD47 186 aaPredicted RBP13.7□□□□□ -0.22
MBD1-203ENST00000339998 FANCFQ9NPI8 374 aa13.7□□□□□ -0.22
MBD1-203ENST00000339998 SVILO95425 2214 aa13.7□□□□□ -0.22
MBD1-203ENST00000339998 SPAARA0A1B0GVQ0 90 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 ZNHIT1O43257 154 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 SERPINA7P05543 415 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 GIFP27352 417 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 CLDN15P56746 228 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 ATAD3CQ5T2N8 411 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 FDX2Q6P4F2 183 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 SLC25A47Q6Q0C1 308 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 CREB3L2Q70SY1 520 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 TOMM5Q8N4H5 51 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 OR6X1Q8NH79 312 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 PHYHIPQ92561 330 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 DDA1Q9BW61 102 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 RBM24Q9BX46 236 aaKnown RBP13.69□□□□□ -0.22
MBD1-203ENST00000339998 CACNG2Q9Y698 323 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 ORC5O43913 435 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 CXCL13O43927 109 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 TTRP02766 147 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 ACSM4P0C7M7 580 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 PTH2RP49190 550 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 CCR9P51686 369 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 PRSS12P56730 875 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 TMEM164Q5U3C3 297 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 SFRP4Q6FHJ7 346 aaPredicted RBP13.69□□□□□ -0.22
MBD1-203ENST00000339998 MZT2BQ6NZ67 158 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 ZNF454Q8N9F8 522 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 DEFB124Q8NES8 71 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 FGGYQ96C11 551 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 ST6GAL2Q96JF0 529 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 SGCZQ96LD1 299 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 ZNF416Q9BWM5 594 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 ZMAT3Q9HA38 289 aaKnown RBP13.69□□□□□ -0.22
MBD1-203ENST00000339998 FOXJ3Q9UPW0 622 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 BOLA1Q9Y3E2 137 aa13.69□□□□□ -0.22
MBD1-203ENST00000339998 CCDC187A0A096LP49 1063 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 NPIPB13A6NJU9 1138 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 NPIPB4C9JG80 1138 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 CD63P08962 238 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 GDF1P27539 372 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 GDNFP39905 211 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 POU3F4P49335 361 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 SRYQ05066 204 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 KCNJ8Q15842 424 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 DTX1Q86Y01 620 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 ZIC4Q8N9L1 334 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 C1orf198Q9H425 327 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 NUDT15Q9NV35 164 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 FAM86C1Q9NVL1 165 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 FAM206AQ9NX38 181 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 NKIRAS2Q9NYR9 191 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 KLHL9Q9P2J3 617 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 ELF5Q9UKW6 265 aaPredicted RBP13.68□□□□□ -0.22
MBD1-203ENST00000339998 CAMK2AQ9UQM7 478 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 NPIPA2E9PIF3 369 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 NPIPA3F8WFD2 350 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 SMAD9O15198 467 aaKnown RBP13.68□□□□□ -0.22
MBD1-203ENST00000339998 GMDSO60547 372 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 AQP8O94778 261 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 CSRP1P21291 193 aaKnown RBP13.68□□□□□ -0.22
MBD1-203ENST00000339998 PTBP1P26599 531 aaKnown RBP eCLIP13.68□□□□□ -0.22
MBD1-203ENST00000339998 GUCA2AQ02747 115 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 CBX3Q13185 183 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 TRIP6Q15654 476 aaKnown RBP13.68□□□□□ -0.22
MBD1-203ENST00000339998 TMEM69Q5SWH9 247 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 GLYATL3Q5SZD4 288 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 BCL2L15Q5TBC7 163 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 SUMF1Q8NBK3 374 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 OR51E1Q8TCB6 317 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 ADAMTS14Q8WXS8 1223 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 SFXN2Q96NB2 322 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 MFRPQ9BY79 579 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 IGHV3-9P01782 118 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 PATE4P0C8F1 98 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 ICAM2P13598 275 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 SLC6A1P30531 599 aa13.68□□□□□ -0.22
MBD1-203ENST00000339998 MMP15P51511 669 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms