RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 HSD11B1P28845 292 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 RPS19P39019 145 aaKnown RBP12.91□□□□□ -0.34
CBX3-201ENST00000337620 FOXG1P55316 489 aaPredicted RBP12.91□□□□□ -0.34
CBX3-201ENST00000337620 ARF1P84077 181 aaKnown RBP12.91□□□□□ -0.34
CBX3-201ENST00000337620 LSAMPQ13449 338 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 SF3B4Q15427 424 aaKnown RBP eCLIP12.91□□□□□ -0.344e-17■□□□□ 8.6
CBX3-201ENST00000337620 WDR38Q5JTN6 314 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 ZNF544Q6NX49 715 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 FAM214BQ7L5A3 538 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 RDH10Q8IZV5 341 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 CNEP1R1Q8N9A8 125 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 C4orf45Q96LM5 186 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 COMMD4Q9H0A8 199 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 SNTG1Q9NSN8 517 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 SLC22A13Q9Y226 551 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 SLC5A6Q9Y289 635 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 R4GMQ9 66 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 H3BSH0 61 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 RPL36A-HNRNPH2H7BZ11 118 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 CST2P09228 141 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 ABOP16442 354 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 SDC2P34741 201 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 KIR3DL2P43630 455 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 RPS11P62280 158 aaKnown RBP eCLIP12.91□□□□□ -0.34
CBX3-201ENST00000337620 NSUN5P2Q63ZY6 315 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 FDX2Q6P4F2 183 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 SLC16A14Q7RTX9 510 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 CD163Q86VB7 1156 aa12.91□□□□□ -0.34
CBX3-201ENST00000337620 SNRNP40Q96DI7 357 aaKnown RBP12.91□□□□□ -0.34
CBX3-201ENST00000337620 PNRC2Q9NPJ4 139 aaKnown RBP12.91□□□□□ -0.34
CBX3-201ENST00000337620 NCOA6Q14686 2063 aaPredicted RBP12.9□□□□□ -0.34
CBX3-201ENST00000337620 A0A1W2PPK0 400 aa12.9□□□□□ -0.34
CBX3-201ENST00000337620 TMEM212A6NML5 194 aa12.9□□□□□ -0.34
CBX3-201ENST00000337620 OR4C45A6NMZ5 311 aa12.9□□□□□ -0.34
CBX3-201ENST00000337620 LOC110117498-PIK3R3F6TDL0 507 aa12.9□□□□□ -0.34
CBX3-201ENST00000337620 FARS2O95363 451 aaKnown RBP12.9□□□□□ -0.34
CBX3-201ENST00000337620 PATE4P0C8F1 98 aa12.9□□□□□ -0.34
CBX3-201ENST00000337620 GABRA1P14867 456 aa12.9□□□□□ -0.34
CBX3-201ENST00000337620 CALRP27797 417 aaKnown RBP12.9□□□□□ -0.34
CBX3-201ENST00000337620 OR3A2P47893 321 aa12.9□□□□□ -0.34
CBX3-201ENST00000337620 PRKXP51817 358 aa12.9□□□□□ -0.34
CBX3-201ENST00000337620 PER3P56645 1201 aa12.9□□□□□ -0.34
CBX3-201ENST00000337620 GALK2Q01415 458 aa12.9□□□□□ -0.34
CBX3-201ENST00000337620 YIF1BQ5BJH7 314 aa12.9□□□□□ -0.34
CBX3-201ENST00000337620 FAM27D1Q5T7N8 215 aa12.9□□□□□ -0.34
CBX3-201ENST00000337620 FBXW9Q5XUX1 488 aa12.9□□□□□ -0.34
CBX3-201ENST00000337620 OR2A2Q6IF42 318 aa12.9□□□□□ -0.34
CBX3-201ENST00000337620 CATSPERDQ86XM0 798 aa12.9□□□□□ -0.34
CBX3-201ENST00000337620 SKA3Q8IX90 412 aa12.9□□□□□ -0.34
CBX3-201ENST00000337620 OR14A2Q96R54 314 aa12.9□□□□□ -0.34
CBX3-201ENST00000337620 PPIL3Q9H2H8 161 aaKnown RBP12.9□□□□□ -0.34
CBX3-201ENST00000337620 PLEK2Q9NYT0 353 aa12.9□□□□□ -0.34
CBX3-201ENST00000337620 A0A096LPE4 126 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 A0A1W2PPZ6 126 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 CASKO14936 926 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 DOK2O60496 412 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 SRSF10O75494 262 aaKnown RBP12.89□□□□□ -0.35
CBX3-201ENST00000337620 SC5DO75845 299 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 CLEC2LP0C7M8 214 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 MAGEB1P43366 347 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 CCR9P51686 369 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 ZNF829Q3KNS6 432 aaPredicted RBP12.89□□□□□ -0.35
CBX3-201ENST00000337620 PRR30Q53SZ7 412 aaPredicted RBP12.89□□□□□ -0.35
CBX3-201ENST00000337620 ZMAT1Q5H9K5 638 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 RHOUQ7L0Q8 258 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 ABHD12BQ7Z5M8 362 aaPredicted RBP12.89□□□□□ -0.35
CBX3-201ENST00000337620 RGP1Q92546 391 aaPredicted RBP12.89□□□□□ -0.35
CBX3-201ENST00000337620 CXorf56Q9H5V9 222 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 ASF1BQ9NVP2 202 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 OR52A1Q9UKL2 312 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 N6AMT1Q9Y5N5 214 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 SMIM30A4D0T7 59 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 FIGNL2A6NMB9 653 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 WDR1O75083 606 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 SOX6P35712 828 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 TDGF1P3P51864 188 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 HIST1H3AP68431 136 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 CCDC92Q53HC0 331 aaPredicted RBP12.89□□□□□ -0.35
CBX3-201ENST00000337620 ELFN2Q5R3F8 820 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 HIST2H3PS2Q5TEC6 136 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 C3P1Q6ZMU1 363 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 HIST2H3AQ71DI3 136 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 IL17RDQ8NFM7 739 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 FAM57AQ8TBR7 257 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 ATF6BQ99941 703 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 SLIRPQ9GZT3 109 aaKnown RBP12.89□□□□□ -0.35
CBX3-201ENST00000337620 PMF1-BGLAPU3KQ54 211 aa12.89□□□□□ -0.35
CBX3-201ENST00000337620 CLPXO76031 633 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 IL1AP01583 271 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 ZNF32P17041 273 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 DCTDP32321 178 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 KIR2DL2P43627 348 aaPredicted RBP12.88□□□□□ -0.35
CBX3-201ENST00000337620 MMP16P51512 607 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 SH3BGRP55822 239 aaPredicted RBP12.88□□□□□ -0.35
CBX3-201ENST00000337620 GRB2P62993 217 aaKnown RBP12.88□□□□□ -0.35
CBX3-201ENST00000337620 FOXF2Q12947 444 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 GUSBP1Q15486 140 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 STK11Q15831 433 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 RTL6Q6ICC9 239 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 PAMR1Q6UXH9 720 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms