RNA–Protein interactions for RNA: ENST00000330331.9

RGPD6-202, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2 BASIC

Gene RGPD6, Length 2,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-202ENST00000330331 TMEM106CQ9BVX2 250 aa13.68□□□□□ -0.22
RGPD6-202ENST00000330331 COMMD4Q9H0A8 199 aa13.68□□□□□ -0.22
RGPD6-202ENST00000330331 OR52A5Q9H2C5 316 aa13.68□□□□□ -0.22
RGPD6-202ENST00000330331 CAPN10Q9HC96 672 aa13.68□□□□□ -0.22
RGPD6-202ENST00000330331 ADAP2Q9NPF8 381 aa13.68□□□□□ -0.22
RGPD6-202ENST00000330331 LSM7Q9UK45 103 aaKnown RBP13.68□□□□□ -0.22
RGPD6-202ENST00000330331 TMEM184BQ9Y519 407 aaPredicted RBP13.68□□□□□ -0.22
RGPD6-202ENST00000330331 SCN3AQ9NY46 2000 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 COL4A6Q14031 1691 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 PLXNA2O75051 1894 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 SLC17A2O00624 439 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 CLEC3AO75596 197 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 AK1P00568 194 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 OR13C7P0DN81 318 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 RPS23P62266 143 aaKnown RBP13.67□□□□□ -0.22
RGPD6-202ENST00000330331 PLAURQ03405 335 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 PMPCAQ10713 525 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 SLC9A3R2Q15599 337 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 GUK1Q16774 197 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 KHDC3LQ587J8 217 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 LINC01590Q5TEZ4 76 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 HIST2H3AQ71DI3 136 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 C1QL4Q86Z23 238 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 ZNF619Q8N2I2 560 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 GPBAR1Q8TDU6 330 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 PPP1R14AQ96A00 147 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 PRRT1Q99946 306 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 NMES1Q9C002 83 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 SRA1Q9HD15 236 aaKnown RBP13.67□□□□□ -0.22
RGPD6-202ENST00000330331 PARP11Q9NR21 331 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 YIPF1Q9Y548 306 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 TBC1D3DA0A087WVF3 549 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 TBC1D3IA0A087WXS9 549 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 IGKV1-8A0A0C4DH67 115 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 A0A1B0GV50 99 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 TBC1D3FA6NER0 549 aaPredicted RBP13.67□□□□□ -0.22
RGPD6-202ENST00000330331 ZNF727A8MUV8 499 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 TBC1D3LB9A6J9 549 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 BCAT2O15382 392 aaPredicted RBP13.67□□□□□ -0.22
RGPD6-202ENST00000330331 GLCEO94923 617 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 DUS4LO95620 317 aaKnown RBP13.67□□□□□ -0.22
RGPD6-202ENST00000330331 GPANK1O95872 356 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 DBIP07108 87 aaKnown RBP13.67□□□□□ -0.22
RGPD6-202ENST00000330331 TACR3P29371 465 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 S100A10P60903 97 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 RAP1AP62834 184 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 MIDNQ504T8 468 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 AWAT2Q6E213 333 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 TBC1D3CQ6IPX1 549 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 ABHD17CQ6PCB6 329 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 TBC1D3Q8IZP1 549 aaPredicted RBP13.67□□□□□ -0.22
RGPD6-202ENST00000330331 PRSS35Q8N3Z0 413 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 CYB5D2Q8WUJ1 264 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 SMIM3Q9BZL3 60 aa13.67□□□□□ -0.22
RGPD6-202ENST00000330331 TBC1D3BA6NDS4 549 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 STMND1H3BQB6 276 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 ZNF432O94892 652 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 THBS1P07996 1170 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 FABP4P15090 132 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 TBC1D3GQ6DHY5 549 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 EIF5AL1Q6IS14 154 aaKnown RBP13.66□□□□□ -0.22
RGPD6-202ENST00000330331 ZNF529Q6P280 563 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 PRSS54Q6PEW0 395 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 ZNF595Q8IYB9 648 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 OR1J1Q8NGS3 322 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 MARCH1Q8TCQ1 289 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 CMBLQ96DG6 245 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 CMKLR1Q99788 373 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 LMAN1LQ9HAT1 526 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 TM7SF3Q9NS93 570 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 GSKIPQ9P0R6 139 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 ENTPD2Q9Y5L3 495 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 PUS1Q9Y606 427 aaKnown RBP eCLIP13.66□□□□□ -0.22
RGPD6-202ENST00000330331 IFNA10P01566 189 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 LRG1P02750 347 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 GPR1P46091 355 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 DEFB103AP81534 67 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 ID2Q02363 134 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 ZNF616Q08AN1 781 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 RAB32Q13637 225 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 C14orf28Q4W4Y0 310 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 TRMT12Q53H54 448 aaKnown RBP13.66□□□□□ -0.22
RGPD6-202ENST00000330331 ALG10BQ5I7T1 473 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 GLYATL3Q5SZD4 288 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 DCST2Q5T1A1 773 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 LINC01555Q8NAE3 123 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 MRPL37Q9BZE1 423 aaKnown RBP13.66□□□□□ -0.22
RGPD6-202ENST00000330331 PDE7BQ9NP56 450 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 HDGFL3Q9Y3E1 203 aa13.66□□□□□ -0.22
RGPD6-202ENST00000330331 A0A0B4J2E0 115 aa13.65□□□□□ -0.22
RGPD6-202ENST00000330331 A0A1B0GX12 115 aa13.65□□□□□ -0.22
RGPD6-202ENST00000330331 MED19A0JLT2 244 aaPredicted RBP13.65□□□□□ -0.22
RGPD6-202ENST00000330331 GRM6O15303 877 aa13.65□□□□□ -0.22
RGPD6-202ENST00000330331 ABHD16AO95870 558 aa13.65□□□□□ -0.22
RGPD6-202ENST00000330331 CDKN2AP42771 156 aaKnown RBP13.65□□□□□ -0.22
RGPD6-202ENST00000330331 CX3CR1P49238 355 aa13.65□□□□□ -0.22
RGPD6-202ENST00000330331 SLC26A5P58743 744 aa13.65□□□□□ -0.22
RGPD6-202ENST00000330331 ZNF343Q6P1L6 599 aa13.65□□□□□ -0.22
RGPD6-202ENST00000330331 LRRC69Q6ZNQ3 347 aa13.65□□□□□ -0.22
RGPD6-202ENST00000330331 FJX1Q86VR8 437 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms