RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 CDRT1O95170 752 aa19.8■□□□□ 0.76
IRF3-201ENST00000309877 PNPP00491 289 aa19.8■□□□□ 0.76
IRF3-201ENST00000309877 DCTDP32321 178 aa19.8■□□□□ 0.76
IRF3-201ENST00000309877 LSAMPQ13449 338 aa19.8■□□□□ 0.76
IRF3-201ENST00000309877 NRN1LQ496H8 165 aa19.8■□□□□ 0.76
IRF3-201ENST00000309877 WDR38Q5JTN6 314 aa19.8■□□□□ 0.76
IRF3-201ENST00000309877 C9orf135Q5VTT2 229 aa19.8■□□□□ 0.76
IRF3-201ENST00000309877 FBXW9Q5XUX1 488 aa19.8■□□□□ 0.76
IRF3-201ENST00000309877 SLC16A14Q7RTX9 510 aa19.8■□□□□ 0.76
IRF3-201ENST00000309877 CD163Q86VB7 1156 aa19.8■□□□□ 0.76
IRF3-201ENST00000309877 FBXO17Q96EF6 278 aa19.8■□□□□ 0.76
IRF3-201ENST00000309877 NIPAL2Q9H841 368 aa19.8■□□□□ 0.76
IRF3-201ENST00000309877 NCOR2Q9Y618 2525 aa19.79■□□□□ 0.76
IRF3-201ENST00000309877 KIR3DL2P43630 455 aa19.79■□□□□ 0.76
IRF3-201ENST00000309877 TDGF1P3P51864 188 aa19.79■□□□□ 0.76
IRF3-201ENST00000309877 PCBD1P61457 104 aa19.79■□□□□ 0.76
IRF3-201ENST00000309877 HIST1H3AP68431 136 aa19.79■□□□□ 0.76
IRF3-201ENST00000309877 MFGE8Q08431 387 aaPredicted RBP19.79■□□□□ 0.76
IRF3-201ENST00000309877 HIST2H3PS2Q5TEC6 136 aa19.79■□□□□ 0.76
IRF3-201ENST00000309877 PAMR1Q6UXH9 720 aa19.79■□□□□ 0.76
IRF3-201ENST00000309877 HIST2H3AQ71DI3 136 aa19.79■□□□□ 0.76
IRF3-201ENST00000309877 CATSPERDQ86XM0 798 aa19.79■□□□□ 0.76
IRF3-201ENST00000309877 CNEP1R1Q8N9A8 125 aa19.79■□□□□ 0.76
IRF3-201ENST00000309877 FAM57AQ8TBR7 257 aa19.79■□□□□ 0.76
IRF3-201ENST00000309877 SNRNP40Q96DI7 357 aaKnown RBP19.79■□□□□ 0.76
IRF3-201ENST00000309877 PRORYQ9H606 182 aa19.79■□□□□ 0.76
IRF3-201ENST00000309877 PNRC2Q9NPJ4 139 aaKnown RBP19.79■□□□□ 0.76
IRF3-201ENST00000309877 PHF3Q92576 2039 aaKnown RBP19.78■□□□□ 0.76
IRF3-201ENST00000309877 SOX6P35712 828 aa19.78■□□□□ 0.76
IRF3-201ENST00000309877 RPS19P39019 145 aaKnown RBP19.78■□□□□ 0.76
IRF3-201ENST00000309877 PER3P56645 1201 aa19.78■□□□□ 0.76
IRF3-201ENST00000309877 RPS11P62280 158 aaKnown RBP eCLIP19.78■□□□□ 0.76
IRF3-201ENST00000309877 GRB2P62993 217 aaKnown RBP19.78■□□□□ 0.76
IRF3-201ENST00000309877 ODF4Q2M2E3 257 aa19.78■□□□□ 0.76
IRF3-201ENST00000309877 C1orf185Q5T7R7 199 aa19.78■□□□□ 0.76
IRF3-201ENST00000309877 SNTG1Q9NSN8 517 aa19.78■□□□□ 0.76
IRF3-201ENST00000309877 PLEK2Q9NYT0 353 aa19.78■□□□□ 0.76
IRF3-201ENST00000309877 MALT1Q9UDY8 824 aa19.78■□□□□ 0.76
IRF3-201ENST00000309877 OR52A1Q9UKL2 312 aa19.78■□□□□ 0.76
IRF3-201ENST00000309877 SLC22A13Q9Y226 551 aa19.78■□□□□ 0.76
IRF3-201ENST00000309877 SLC5A6Q9Y289 635 aa19.78■□□□□ 0.76
IRF3-201ENST00000309877 SRSF10O75494 262 aaKnown RBP19.78■□□□□ 0.76
IRF3-201ENST00000309877 SC5DO75845 299 aa19.78■□□□□ 0.76
IRF3-201ENST00000309877 GATBO75879 557 aaKnown RBP19.78■□□□□ 0.76
IRF3-201ENST00000309877 IL1AP01583 271 aa19.78■□□□□ 0.76
IRF3-201ENST00000309877 SDC2P34741 201 aa19.78■□□□□ 0.76
IRF3-201ENST00000309877 MXD1Q05195 221 aa19.78■□□□□ 0.76
IRF3-201ENST00000309877 SCRN3Q0VDG4 424 aa19.78■□□□□ 0.76
IRF3-201ENST00000309877 GUSBP1Q15486 140 aa19.78■□□□□ 0.76
IRF3-201ENST00000309877 ZMAT1Q5H9K5 638 aa19.78■□□□□ 0.76
IRF3-201ENST00000309877 ELFN2Q5R3F8 820 aa19.78■□□□□ 0.76
IRF3-201ENST00000309877 SYT9Q86SS6 491 aa19.78■□□□□ 0.76
IRF3-201ENST00000309877 SKA3Q8IX90 412 aa19.78■□□□□ 0.76
IRF3-201ENST00000309877 SLC25A18Q9H1K4 315 aa19.78■□□□□ 0.76
IRF3-201ENST00000309877 BRD7Q9NPI1 651 aa19.78■□□□□ 0.76
IRF3-201ENST00000309877 CCDC59Q9P031 241 aaKnown RBP19.78■□□□□ 0.76
IRF3-201ENST00000309877 TIMM10BQ9Y5J6 103 aa19.78■□□□□ 0.76
IRF3-201ENST00000309877 MBD3L4A6NDZ8 208 aaPredicted RBP19.77■□□□□ 0.76
IRF3-201ENST00000309877 MBD3L3A6NE82 208 aaPredicted RBP19.77■□□□□ 0.76
IRF3-201ENST00000309877 MBD3L5A6NJ08 208 aaPredicted RBP19.77■□□□□ 0.76
IRF3-201ENST00000309877 DVL2O14641 736 aa19.77■□□□□ 0.76
IRF3-201ENST00000309877 CASKO14936 926 aa19.77■□□□□ 0.76
IRF3-201ENST00000309877 HOXD4P09016 255 aaPredicted RBP19.77■□□□□ 0.76
IRF3-201ENST00000309877 CALRP27797 417 aaKnown RBP19.77■□□□□ 0.76
IRF3-201ENST00000309877 HOXD11P31277 338 aaPredicted RBP19.77■□□□□ 0.76
IRF3-201ENST00000309877 MMP16P51512 607 aa19.77■□□□□ 0.76
IRF3-201ENST00000309877 PRKXP51817 358 aa19.77■□□□□ 0.76
IRF3-201ENST00000309877 FOXG1P55316 489 aaPredicted RBP19.77■□□□□ 0.76
IRF3-201ENST00000309877 KLRB1Q12918 225 aa19.77■□□□□ 0.76
IRF3-201ENST00000309877 CCDC92Q53HC0 331 aaPredicted RBP19.77■□□□□ 0.76
IRF3-201ENST00000309877 KDF1Q8NAX2 398 aaPredicted RBP19.77■□□□□ 0.76
IRF3-201ENST00000309877 IL17RDQ8NFM7 739 aa19.77■□□□□ 0.76
IRF3-201ENST00000309877 OR6K3Q8NGY3 331 aa19.77■□□□□ 0.76
IRF3-201ENST00000309877 MBD3L2Q8NHZ7 208 aaPredicted RBP19.77■□□□□ 0.76
IRF3-201ENST00000309877 PPP1R14AQ96A00 147 aa19.77■□□□□ 0.76
IRF3-201ENST00000309877 OR14A2Q96R54 314 aa19.77■□□□□ 0.76
IRF3-201ENST00000309877 ATF6BQ99941 703 aa19.77■□□□□ 0.76
IRF3-201ENST00000309877 SLX1AQ9BQ83 275 aa19.77■□□□□ 0.76
IRF3-201ENST00000309877 WACQ9BTA9 647 aa19.77■□□□□ 0.76
IRF3-201ENST00000309877 MED18Q9BUE0 208 aa19.77■□□□□ 0.76
IRF3-201ENST00000309877 TPK1Q9H3S4 243 aa19.77■□□□□ 0.76
IRF3-201ENST00000309877 DDX28Q9NUL7 540 aaKnown RBP19.77■□□□□ 0.76
IRF3-201ENST00000309877 ASF1BQ9NVP2 202 aa19.77■□□□□ 0.76
IRF3-201ENST00000309877 CACNA1GO43497 2377 aa19.77■□□□□ 0.75
IRF3-201ENST00000309877 CLPXO76031 633 aa19.76■□□□□ 0.75
IRF3-201ENST00000309877 MYL9P24844 172 aa19.76■□□□□ 0.75
IRF3-201ENST00000309877 MPGP29372 298 aa19.76■□□□□ 0.75
IRF3-201ENST00000309877 KIR2DL2P43627 348 aaPredicted RBP19.76■□□□□ 0.75
IRF3-201ENST00000309877 GALK2Q01415 458 aa19.76■□□□□ 0.75
IRF3-201ENST00000309877 BCL2L15Q5TBC7 163 aa19.76■□□□□ 0.75
IRF3-201ENST00000309877 GFRALQ6UXV0 394 aa19.76■□□□□ 0.75
IRF3-201ENST00000309877 ZNF627Q7L945 461 aa19.76■□□□□ 0.75
IRF3-201ENST00000309877 RDH10Q8IZV5 341 aa19.76■□□□□ 0.75
IRF3-201ENST00000309877 ZNF283Q8N7M2 679 aa19.76■□□□□ 0.75
IRF3-201ENST00000309877 RGP1Q92546 391 aaPredicted RBP19.76■□□□□ 0.75
IRF3-201ENST00000309877 G6PC2Q9NQR9 355 aa19.76■□□□□ 0.75
IRF3-201ENST00000309877 CACNA1AO00555 2505 aa19.76■□□□□ 0.75
IRF3-201ENST00000309877 A0A096LPE4 126 aa19.75■□□□□ 0.75
IRF3-201ENST00000309877 A0A1W2PPZ6 126 aa19.75■□□□□ 0.75
IRF3-201ENST00000309877 SGCEO43556 437 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms