RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 CRMP1Q14194 572 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 RNF44Q7L0R7 432 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 OVCH1Q7RTY7 1134 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 FAM24BQ8N5W8 94 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 OR10D4PQ8NGN7 298 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 OR4K13Q8NH42 304 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 PHYHIPLQ96FC7 376 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 LCORQ96JN0 433 aaPredicted RBP9.87□□□□□ -0.83
LSM3-201ENST00000306024 GLIPR2Q9H4G4 154 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 TRAV1-2A0A0B4J238 106 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 PRR19A6NJB7 356 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 HMGN2P05204 90 aaKnown RBP9.87□□□□□ -0.83
LSM3-201ENST00000306024 FOLR1P15328 257 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 IL13RA1P78552 427 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 ACTBL2Q562R1 376 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 UBE3DQ7Z6J8 389 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 MAML2Q8IZL2 1156 aaPredicted RBP9.87□□□□□ -0.83
LSM3-201ENST00000306024 OR4K17Q8NGC6 315 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 OR52E2Q8NGJ4 325 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 ADAMTS18Q8TE60 1221 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 AKR1E2Q96JD6 320 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 PHB2Q99623 299 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 EXOSC3Q9NQT5 275 aaKnown RBP9.87□□□□□ -0.83
LSM3-201ENST00000306024 TREM2Q9NZC2 230 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 COPS7AQ9UBW8 275 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 A0A0A6YYD5 115 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 RNASEK-C17orf49H0YIS7 233 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 CLN5O75503 358 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 IFNA2P01563 188 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 MBP02144 154 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 CD3DP04234 171 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 HEXBP07686 556 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 CPMP14384 443 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 CASP6P55212 293 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 NKX6-1P78426 367 aaPredicted RBP9.87□□□□□ -0.83
LSM3-201ENST00000306024 RHEBQ15382 184 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 NNATQ16517 81 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 RHOUQ7L0Q8 258 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 LMF1Q96S06 567 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 CNN2Q99439 309 aaKnown RBP9.87□□□□□ -0.83
LSM3-201ENST00000306024 A0A087X0M5 115 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 A0A1B0GX30 115 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 A0A1W2PPH5 198 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 MCIDASD6RGH6 385 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 TERTO14746 1132 aaKnown RBP9.86□□□□□ -0.83
LSM3-201ENST00000306024 DAOP14920 347 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 PGAM2P15259 253 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 MST1P26927 711 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 F2RL1P55085 397 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 RNF4P78317 190 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 HABP2Q14520 560 aaPredicted RBP9.86□□□□□ -0.83
LSM3-201ENST00000306024 MPPED2Q15777 294 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 KMT5CQ86Y97 462 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 MISPQ8IVT2 679 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 UBAC2Q8NBM4 344 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 MFSD8Q8NHS3 518 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 AMDHD1Q96NU7 426 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 SLC6A7Q99884 636 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 METTL8Q9H825 291 aaKnown RBP9.86□□□□□ -0.83
LSM3-201ENST00000306024 MMP26Q9NRE1 261 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 FBXL4Q9UKA2 621 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 MED31Q9Y3C7 131 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 LNP1A1A4G5 178 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 NUDT19A8MXV4 375 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 GPR37O15354 613 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 CLUP10909 449 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 CASRP41180 1078 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 ATP1B3P54709 279 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 GUCA2AQ02747 115 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 ECH1Q13011 328 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 CD163Q86VB7 1156 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 MORN4Q8NDC4 146 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 SLC25A36Q96CQ1 311 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 GGACTQ9BVM4 153 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 COMMD4Q9H0A8 199 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 MEX3AA1L020 520 aaKnown RBP9.86□□□□□ -0.83
LSM3-201ENST00000306024 YIF1AO95070 293 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 NSA2O95478 260 aaKnown RBP9.86□□□□□ -0.83
LSM3-201ENST00000306024 ADH6P28332 368 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 GPX4P36969 197 aaPredicted RBP9.86□□□□□ -0.83
LSM3-201ENST00000306024 CCR4P51679 360 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 C21orf58P58505 322 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 FAM111BQ6SJ93 734 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 BPIFB2Q8N4F0 458 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 OR14K1Q8NGZ2 314 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 CDC6Q99741 560 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 CHST6Q9GZX3 395 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 LYRM4Q9HD34 91 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 TRIOO75962 3097 aa9.86□□□□□ -0.83
LSM3-201ENST00000306024 TRAV27A0A087WT01 109 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 NPIPB8E9PQR5 432 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 EIF1AYO14602 144 aaKnown RBP9.85□□□□□ -0.83
LSM3-201ENST00000306024 CDC40O60508 579 aaKnown RBP eCLIP9.85□□□□□ -0.83
LSM3-201ENST00000306024 FUT1P19526 365 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 EIF1AXP47813 144 aaKnown RBP9.85□□□□□ -0.83
LSM3-201ENST00000306024 FAM53BQ14153 422 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 TGIF1Q15583 401 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 RNASE10Q5GAN6 216 aaKnown RBP9.85□□□□□ -0.83
LSM3-201ENST00000306024 RPL22L1Q6P5R6 122 aaKnown RBP9.85□□□□□ -0.83
LSM3-201ENST00000306024 SDR9C7Q8NEX9 313 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms