RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 A0A087WZY1 265 aa9.13□□□□□ -0.95
GABRB3-201ENST00000299267 MEX3AA1L020 520 aaKnown RBP9.13□□□□□ -0.95
GABRB3-201ENST00000299267 TRAPPC2LH3BP13 241 aa9.13□□□□□ -0.95
GABRB3-201ENST00000299267 DVL2O14641 736 aa9.13□□□□□ -0.95
GABRB3-201ENST00000299267 UPK1BO75841 260 aa9.13□□□□□ -0.95
GABRB3-201ENST00000299267 LYZL6O75951 148 aa9.13□□□□□ -0.95
GABRB3-201ENST00000299267 IFNA21P01568 189 aa9.13□□□□□ -0.95
GABRB3-201ENST00000299267 IL11P20809 199 aa9.13□□□□□ -0.95
GABRB3-201ENST00000299267 LCN1P31025 176 aa9.13□□□□□ -0.95
GABRB3-201ENST00000299267 UQCRC1P31930 480 aa9.13□□□□□ -0.95
GABRB3-201ENST00000299267 RBMXP38159 391 aaKnown RBP9.13□□□□□ -0.95
GABRB3-201ENST00000299267 CLDN20P56880 219 aa9.13□□□□□ -0.95
GABRB3-201ENST00000299267 RAC1P63000 192 aa9.13□□□□□ -0.95
GABRB3-201ENST00000299267 PLXDC2Q6UX71 529 aa9.13□□□□□ -0.95
GABRB3-201ENST00000299267 GCDHQ92947 438 aaPredicted RBP9.13□□□□□ -0.95
GABRB3-201ENST00000299267 TMEM59Q9BXS4 323 aa9.13□□□□□ -0.95
GABRB3-201ENST00000299267 CCDC86Q9H6F5 360 aaKnown RBP9.13□□□□□ -0.95
GABRB3-201ENST00000299267 MAN2C1Q9NTJ4 1040 aa9.13□□□□□ -0.95
GABRB3-201ENST00000299267 ZNF736B4DX44 427 aaPredicted RBP9.13□□□□□ -0.95
GABRB3-201ENST00000299267 JUNBP17275 347 aaPredicted RBP9.13□□□□□ -0.95
GABRB3-201ENST00000299267 SLC17A1Q14916 467 aa9.13□□□□□ -0.95
GABRB3-201ENST00000299267 ALKBH6Q3KRA9 238 aa9.13□□□□□ -0.95
GABRB3-201ENST00000299267 PXKQ7Z7A4 578 aa9.13□□□□□ -0.95
GABRB3-201ENST00000299267 DEFB108BQ8NET1 73 aa9.13□□□□□ -0.95
GABRB3-201ENST00000299267 M1APQ8TC57 530 aa9.13□□□□□ -0.95
GABRB3-201ENST00000299267 ADAMTS14Q8WXS8 1223 aa9.13□□□□□ -0.95
GABRB3-201ENST00000299267 FOXB1Q99853 325 aa9.13□□□□□ -0.95
GABRB3-201ENST00000299267 COPZ2Q9P299 210 aa9.13□□□□□ -0.95
GABRB3-201ENST00000299267 SNRNP200O75643 2136 aaKnown RBP9.12□□□□□ -0.95
GABRB3-201ENST00000299267 C21orf140B9A014 251 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 PLPP3O14495 311 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 PIPP12273 146 aaPredicted RBP9.12□□□□□ -0.95
GABRB3-201ENST00000299267 IL7P13232 177 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 ZNF121P58317 390 aaPredicted RBP9.12□□□□□ -0.95
GABRB3-201ENST00000299267 ARF1P84077 181 aaKnown RBP9.12□□□□□ -0.95
GABRB3-201ENST00000299267 IKZF1Q13422 519 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 CNN3Q15417 329 aaKnown RBP9.12□□□□□ -0.95
GABRB3-201ENST00000299267 YIF1BQ5BJH7 314 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 EXOSC6Q5RKV6 272 aaKnown RBP9.12□□□□□ -0.95
GABRB3-201ENST00000299267 GLIPR1L1Q6UWM5 242 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 NRARPQ7Z6K4 114 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 APH1BQ8WW43 257 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 CPNE4Q96A23 557 aaPredicted RBP9.12□□□□□ -0.95
GABRB3-201ENST00000299267 FAM3DQ96BQ1 224 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 SORCS2Q96PQ0 1159 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 DERL3Q96Q80 235 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 BCL7BQ9BQE9 202 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 MED18Q9BUE0 208 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 HINT2Q9BX68 163 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 DNTTIP1Q9H147 329 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 WDR54Q9H977 334 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 TIMM10BQ9Y5J6 103 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 LAMA2P24043 3122 aaKnown RBP9.12□□□□□ -0.95
GABRB3-201ENST00000299267 EFSO43281 561 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 GP1BAP07359 652 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 CDK5R1Q15078 307 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 CDCP2Q5VXM1 449 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 TPRA1Q86W33 373 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 LRRC28Q86X40 367 aaPredicted RBP9.12□□□□□ -0.95
GABRB3-201ENST00000299267 OR2AE1Q8NHA4 323 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 APOBEC4Q8WW27 367 aaKnown RBP9.12□□□□□ -0.95
GABRB3-201ENST00000299267 CADP27708 2225 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 NLRC5Q86WI3 1866 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 SLC22A23A1A5C7 686 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 H3BMH7 237 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 ARPC1BO15143 372 aaKnown RBP9.12□□□□□ -0.95
GABRB3-201ENST00000299267 SRD5A2P31213 254 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 SELENOPP49908 381 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 RAB1AP62820 205 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 RIPPLY1Q0D2K3 151 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 SSX6Q7RTT6 188 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 C17orf47Q8NEP4 570 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 OR4M1Q8NGD0 313 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 HAVCR2Q8TDQ0 301 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 PELI1Q96FA3 418 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 IGF2RP11717 2491 aa9.12□□□□□ -0.95
GABRB3-201ENST00000299267 A0A0G2JMP0 313 aa9.11□□□□□ -0.95
GABRB3-201ENST00000299267 A0A0X1KG70 313 aa9.11□□□□□ -0.95
GABRB3-201ENST00000299267 FAM221AA4D161 298 aa9.11□□□□□ -0.95
GABRB3-201ENST00000299267 ARPC3O15145 178 aa9.11□□□□□ -0.95
GABRB3-201ENST00000299267 BET1O15155 118 aa9.11□□□□□ -0.95
GABRB3-201ENST00000299267 ITGB2P05107 769 aa9.11□□□□□ -0.95
GABRB3-201ENST00000299267 UBCP0CG48 685 aaKnown RBP9.11□□□□□ -0.95
GABRB3-201ENST00000299267 GLI4P10075 376 aa9.11□□□□□ -0.95
GABRB3-201ENST00000299267 FAHP16930 419 aa9.11□□□□□ -0.95
GABRB3-201ENST00000299267 CNR1P21554 472 aa9.11□□□□□ -0.95
GABRB3-201ENST00000299267 ACTBP60709 375 aa9.11□□□□□ -0.95
GABRB3-201ENST00000299267 ACTG1P63261 375 aa9.11□□□□□ -0.95
GABRB3-201ENST00000299267 INSM1Q01101 510 aaPredicted RBP9.11□□□□□ -0.95
GABRB3-201ENST00000299267 CCDC71Q8IV32 467 aaPredicted RBP9.11□□□□□ -0.95
GABRB3-201ENST00000299267 OR4M2Q8NGB6 313 aa9.11□□□□□ -0.95
GABRB3-201ENST00000299267 ZPLD1Q8TCW7 415 aa9.11□□□□□ -0.95
GABRB3-201ENST00000299267 AKAP1Q92667 903 aaKnown RBP eCLIP9.11□□□□□ -0.95
GABRB3-201ENST00000299267 MCHR2Q969V1 340 aa9.11□□□□□ -0.95
GABRB3-201ENST00000299267 CLCC1Q96S66 551 aa9.11□□□□□ -0.95
GABRB3-201ENST00000299267 NIPAL2Q9H841 368 aa9.11□□□□□ -0.95
GABRB3-201ENST00000299267 PROCRQ9UNN8 238 aa9.11□□□□□ -0.95
GABRB3-201ENST00000299267 HIF3AQ9Y2N7 669 aa9.11□□□□□ -0.95
GABRB3-201ENST00000299267 OTOGLQ3ZCN5 2332 aa9.11□□□□□ -0.95
GABRB3-201ENST00000299267 PLXNA4Q9HCM2 1894 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms