RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 IGHG1P01857 330 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 P04436 131 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 HTR2CP28335 458 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 ST3GAL2Q16842 350 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 LINC00303Q3SY05 128 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 SLC22A10Q63ZE4 541 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 AWAT2Q6E213 333 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 PRSS42Q7Z5A4 293 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 VASH2Q86V25 355 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 LRRC75AQ8NAA5 344 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 OR4D10Q8NGI6 311 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 RNF166Q96A37 237 aaPredicted RBP8.31□□□□□ -1.08
PRDM9-201ENST00000296682 SLC6A7Q99884 636 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 SELENOIQ9C0D9 397 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 PCED1AQ9H1Q7 454 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 ANKUB1A6NFN9 424 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 ZNF814B7Z6K7 855 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 EFNA2O43921 213 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 CD3DP04234 171 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 ALDOBP05062 364 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 ANXA3P12429 323 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 SLC6A1P30531 599 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 DUSP3P51452 185 aaPredicted RBP8.31□□□□□ -1.08
PRDM9-201ENST00000296682 IL10RAQ13651 578 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 ZNF468Q5VIY5 522 aaPredicted RBP8.31□□□□□ -1.08
PRDM9-201ENST00000296682 KCTD9Q7L273 389 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 WDFY1Q8IWB7 410 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 CARFQ8N187 725 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 FTMTQ8N4E7 242 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 SLC25A38Q96DW6 304 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 CMTM3Q96MX0 182 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 SFXN2Q96NB2 322 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 GUCD1Q96NT3 240 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 GFI1Q99684 422 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 IRF2BPLQ9H1B7 796 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 C20orf85Q9H1P6 137 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 CLEC4MQ9H2X3 399 aaPredicted RBP8.31□□□□□ -1.08
PRDM9-201ENST00000296682 C1orf198Q9H425 327 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 PLA2G3Q9NZ20 509 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 STEAP1Q9UHE8 339 aa8.31□□□□□ -1.08
PRDM9-201ENST00000296682 D6RAR5 112 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 TPD52L2O43399 206 aaKnown RBP8.3□□□□□ -1.08
PRDM9-201ENST00000296682 STK17BO94768 372 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 IFNA6P05013 189 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 CD37P11049 281 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 SSR4P51571 173 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 EMC4Q5J8M3 183 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 MAFIPQ8WZ33 124 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 MIB2Q96AX9 1013 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 MAP6Q96JE9 813 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 PCNX2A6NKB5 2137 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 FER1L5A0AVI2 2057 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 A6NIZ1 184 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 ACOT7O00154 380 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 RAP1BP61224 184 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 RAP1AP62834 184 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 SLC36A2Q495M3 483 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 NKAPLQ5M9Q1 402 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 ZNF684Q5T5D7 378 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 C3orf33Q6P1S2 294 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 DHRS13Q6UX07 377 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 RAB11FIP2Q7L804 512 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 ANGPTL5Q86XS5 388 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 UBALD2Q8IYN6 164 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 NUDCD2Q8WVJ2 157 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 SEC22AQ96IW7 307 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 MARVELD1Q9BSK0 173 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 COQ3Q9NZJ6 369 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 PLEKHA6Q9Y2H5 1048 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 CUL9Q8IWT3 2517 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 TNRC18O15417 2968 aaPredicted RBP8.3□□□□□ -1.08
PRDM9-201ENST00000296682 OR6C76A6NM76 312 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 FAM166BA8MTA8 275 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 GPR171O14626 319 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 CER1O95813 267 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 CYB5AP00167 134 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 GDF1P27539 372 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 ERP29P30040 261 aaKnown RBP8.3□□□□□ -1.08
PRDM9-201ENST00000296682 LCN1P31025 176 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 CSNK1A1P48729 337 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 CDK10Q15131 360 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 WIPI1Q5MNZ9 446 aaPredicted RBP8.3□□□□□ -1.08
PRDM9-201ENST00000296682 DCAF12Q5T6F0 453 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 OR52W1Q6IF63 320 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 TMEM81Q6P7N7 255 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 ZNF704Q6ZNC4 412 aaPredicted RBP8.3□□□□□ -1.08
PRDM9-201ENST00000296682 DNM1P46Q6ZS02 220 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 FOXRED2Q8IWF2 684 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 HAVCR2Q8TDQ0 301 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 CLDN23Q96B33 292 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 IFT46Q9NQC8 304 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 FOXJ3Q9UPW0 622 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 NUBP2Q9Y5Y2 271 aa8.3□□□□□ -1.08
PRDM9-201ENST00000296682 PCNX1Q96RV3 2341 aa8.29□□□□□ -1.08
PRDM9-201ENST00000296682 POM121CA8CG34 1229 aa8.29□□□□□ -1.08
PRDM9-201ENST00000296682 DXOO77932 396 aaKnown RBP8.29□□□□□ -1.08
PRDM9-201ENST00000296682 RAB3DO95716 219 aa8.29□□□□□ -1.08
PRDM9-201ENST00000296682 AKR1C4P17516 323 aa8.29□□□□□ -1.08
PRDM9-201ENST00000296682 FAUP35544 74 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms