RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 ANKRD17O75179 2603 aaKnown RBP21.68■■□□□ 1.06
SSBP4-201ENST00000270061 PDZD2O15018 2839 aa21.67■■□□□ 1.06
SSBP4-201ENST00000270061 H0YC42 278 aa21.67■■□□□ 1.06
SSBP4-201ENST00000270061 RGS9O75916 674 aaPredicted RBP21.67■■□□□ 1.06
SSBP4-201ENST00000270061 ENTPD1P49961 510 aa21.67■■□□□ 1.06
SSBP4-201ENST00000270061 CARD18P57730 90 aa21.67■■□□□ 1.06
SSBP4-201ENST00000270061 FMODQ06828 376 aa21.67■■□□□ 1.06
SSBP4-201ENST00000270061 FOXF2Q12947 444 aa21.67■■□□□ 1.06
SSBP4-201ENST00000270061 HIST3H3Q16695 136 aa21.67■■□□□ 1.06
SSBP4-201ENST00000270061 PCK2Q16822 640 aa21.67■■□□□ 1.06
SSBP4-201ENST00000270061 HBMQ6B0K9 141 aa21.67■■□□□ 1.06
SSBP4-201ENST00000270061 CREB3L2Q70SY1 520 aa21.67■■□□□ 1.06
SSBP4-201ENST00000270061 ZNF454Q8N9F8 522 aa21.67■■□□□ 1.06
SSBP4-201ENST00000270061 OR2V1Q8NHB1 315 aa21.67■■□□□ 1.06
SSBP4-201ENST00000270061 SMIM19Q96E16 107 aa21.67■■□□□ 1.06
SSBP4-201ENST00000270061 SFXN3Q9BWM7 321 aa21.67■■□□□ 1.06
SSBP4-201ENST00000270061 SRXN1Q9BYN0 137 aa21.67■■□□□ 1.06
SSBP4-201ENST00000270061 MRM2Q9UI43 246 aaKnown RBP21.67■■□□□ 1.06
SSBP4-201ENST00000270061 ZNF726A6NNF4 738 aa21.66■■□□□ 1.06
SSBP4-201ENST00000270061 ABHD16AO95870 558 aa21.66■■□□□ 1.06
SSBP4-201ENST00000270061 TGM6O95932 706 aa21.66■■□□□ 1.06
SSBP4-201ENST00000270061 CLRN1P58418 232 aa21.66■■□□□ 1.06
SSBP4-201ENST00000270061 TLE4Q04727 773 aa21.66■■□□□ 1.06
SSBP4-201ENST00000270061 SLC17A1Q14916 467 aa21.66■■□□□ 1.06
SSBP4-201ENST00000270061 FBXL19-AS1Q494R0 122 aa21.66■■□□□ 1.06
SSBP4-201ENST00000270061 GCNT2Q8N0V5 402 aa21.66■■□□□ 1.06
SSBP4-201ENST00000270061 KCNN2Q9H2S1 579 aa21.66■■□□□ 1.06
SSBP4-201ENST00000270061 GRIP1Q9Y3R0 1128 aa21.66■■□□□ 1.06
SSBP4-201ENST00000270061 SPG11Q96JI7 2443 aa21.66■■□□□ 1.06
SSBP4-201ENST00000270061 IGKV1D-43A0A0B4J1Z2 117 aa21.66■■□□□ 1.06
SSBP4-201ENST00000270061 SLC22A20A6NK97 555 aa21.66■■□□□ 1.06
SSBP4-201ENST00000270061 EEF1E1-BLOC1S5C9J1V9 151 aa21.66■■□□□ 1.06
SSBP4-201ENST00000270061 EIF1AYO14602 144 aaKnown RBP21.66■■□□□ 1.06
SSBP4-201ENST00000270061 EEF1E1O43324 174 aaKnown RBP21.66■■□□□ 1.06
SSBP4-201ENST00000270061 KRT8P05787 483 aa21.66■■□□□ 1.06
SSBP4-201ENST00000270061 CAMK2DQ13557 499 aa21.66■■□□□ 1.06
SSBP4-201ENST00000270061 SLC18B1Q6NT16 456 aa21.66■■□□□ 1.06
SSBP4-201ENST00000270061 FAM220AQ7Z4H9 259 aa21.66■■□□□ 1.06
SSBP4-201ENST00000270061 GLB1L2Q8IW92 636 aa21.66■■□□□ 1.06
SSBP4-201ENST00000270061 RNASE6Q93091 150 aaKnown RBP21.66■■□□□ 1.06
SSBP4-201ENST00000270061 RNF166Q96A37 237 aaPredicted RBP21.66■■□□□ 1.06
SSBP4-201ENST00000270061 DCLRE1CQ96SD1 692 aaKnown RBP21.66■■□□□ 1.06
SSBP4-201ENST00000270061 GALNT8Q9NY28 637 aa21.66■■□□□ 1.06
SSBP4-201ENST00000270061 KCNN3Q9UGI6 736 aa21.66■■□□□ 1.06
SSBP4-201ENST00000270061 KCNG2Q9UJ96 466 aa21.66■■□□□ 1.06
SSBP4-201ENST00000270061 FOXD3Q9UJU5 478 aaPredicted RBP21.66■■□□□ 1.06
SSBP4-201ENST00000270061 UPK3AO75631 287 aa21.65■■□□□ 1.06
SSBP4-201ENST00000270061 SC5DO75845 299 aa21.65■■□□□ 1.06
SSBP4-201ENST00000270061 CDRT1O95170 752 aa21.65■■□□□ 1.06
SSBP4-201ENST00000270061 PSKH1P11801 424 aa21.65■■□□□ 1.06
SSBP4-201ENST00000270061 NR2C1P13056 603 aa21.65■■□□□ 1.06
SSBP4-201ENST00000270061 ENPP1P22413 925 aa21.65■■□□□ 1.06
SSBP4-201ENST00000270061 BMXP51813 675 aa21.65■■□□□ 1.06
SSBP4-201ENST00000270061 ADAM8P78325 824 aa21.65■■□□□ 1.06
SSBP4-201ENST00000270061 SLC3A1Q07837 685 aa21.65■■□□□ 1.06
SSBP4-201ENST00000270061 PDSS1Q5T2R2 415 aa21.65■■□□□ 1.06
SSBP4-201ENST00000270061 OR9K2Q8NGE7 335 aa21.65■■□□□ 1.06
SSBP4-201ENST00000270061 THEM6Q8WUY1 208 aa21.65■■□□□ 1.06
SSBP4-201ENST00000270061 GHSRQ92847 366 aa21.65■■□□□ 1.06
SSBP4-201ENST00000270061 SMAD9O15198 467 aaKnown RBP21.64■■□□□ 1.06
SSBP4-201ENST00000270061 AQP8O94778 261 aa21.64■■□□□ 1.06
SSBP4-201ENST00000270061 RORCP51449 518 aa21.64■■□□□ 1.06
SSBP4-201ENST00000270061 CLDN17P56750 224 aa21.64■■□□□ 1.06
SSBP4-201ENST00000270061 ROM1Q03395 351 aa21.64■■□□□ 1.06
SSBP4-201ENST00000270061 ZNF829Q3KNS6 432 aaPredicted RBP21.64■■□□□ 1.06
SSBP4-201ENST00000270061 OR2A2Q6IF42 318 aa21.64■■□□□ 1.06
SSBP4-201ENST00000270061 SLC25A47Q6Q0C1 308 aa21.64■■□□□ 1.06
SSBP4-201ENST00000270061 ABHD4Q8TB40 342 aa21.64■■□□□ 1.06
SSBP4-201ENST00000270061 S100ZQ8WXG8 99 aa21.64■■□□□ 1.06
SSBP4-201ENST00000270061 SLC25A46Q96AG3 418 aa21.64■■□□□ 1.06
SSBP4-201ENST00000270061 FOXN4Q96NZ1 517 aa21.64■■□□□ 1.06
SSBP4-201ENST00000270061 TIGARQ9NQ88 270 aa21.64■■□□□ 1.06
SSBP4-201ENST00000270061 A0A075B6Q4 140 aa21.64■■□□□ 1.05
SSBP4-201ENST00000270061 GPRIN2O60269 458 aa21.64■■□□□ 1.05
SSBP4-201ENST00000270061 ZNF823P16415 610 aa21.64■■□□□ 1.05
SSBP4-201ENST00000270061 EDNRAP25101 427 aa21.64■■□□□ 1.05
SSBP4-201ENST00000270061 OPRL1P41146 370 aa21.64■■□□□ 1.05
SSBP4-201ENST00000270061 GDI2P50395 445 aaKnown RBP21.64■■□□□ 1.05
SSBP4-201ENST00000270061 LIPNQ5VXI9 398 aa21.64■■□□□ 1.05
SSBP4-201ENST00000270061 OR10D3Q8NH80 312 aa21.64■■□□□ 1.05
SSBP4-201ENST00000270061 OR8B4Q96RC9 309 aa21.64■■□□□ 1.05
SSBP4-201ENST00000270061 PLGRKTQ9HBL7 147 aa21.64■■□□□ 1.05
SSBP4-201ENST00000270061 JKAMPQ9P055 326 aa21.64■■□□□ 1.05
SSBP4-201ENST00000270061 CCDC168Q8NDH2 2452 aa21.63■■□□□ 1.05
SSBP4-201ENST00000270061 IGHV3-15A0A0B4J1V0 119 aa21.63■■□□□ 1.05
SSBP4-201ENST00000270061 TRBV2A0A0J9YWF9 115 aa21.63■■□□□ 1.05
SSBP4-201ENST00000270061 SERPINA3P01011 423 aa21.63■■□□□ 1.05
SSBP4-201ENST00000270061 OR8G3PP0DMU2 310 aa21.63■■□□□ 1.05
SSBP4-201ENST00000270061 CD8BP10966 210 aa21.63■■□□□ 1.05
SSBP4-201ENST00000270061 DCTN2Q13561 401 aaKnown RBP21.63■■□□□ 1.05
SSBP4-201ENST00000270061 SNTB1Q13884 538 aaKnown RBP21.63■■□□□ 1.05
SSBP4-201ENST00000270061 YIPF7Q8N8F6 280 aa21.63■■□□□ 1.05
SSBP4-201ENST00000270061 CPNE4Q96A23 557 aaPredicted RBP21.63■■□□□ 1.05
SSBP4-201ENST00000270061 ZNF845Q96IR2 970 aaPredicted RBP21.63■■□□□ 1.05
SSBP4-201ENST00000270061 LURAP1Q96LR2 239 aa21.63■■□□□ 1.05
SSBP4-201ENST00000270061 SNTG1Q9NSN8 517 aa21.63■■□□□ 1.05
SSBP4-201ENST00000270061 ZNF175Q9Y473 711 aa21.63■■□□□ 1.05
SSBP4-201ENST00000270061 MPZL1O95297 269 aa21.62■■□□□ 1.05
SSBP4-201ENST00000270061 SPARCP09486 303 aa21.62■■□□□ 1.05
SSBP4-201ENST00000270061 LAP3P28838 519 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms