RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 ZNF665Q9H7R5 613 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 DCAF13Q9NV06 445 aaKnown RBP8.25□□□□□ -1.09
VPS41-201ENST00000265745 TBCCD1Q9NVR7 557 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 PFDN2Q9UHV9 154 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 ZDHHC8Q9ULC8 765 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 NDRG4Q9ULP0 352 aaKnown RBP8.25□□□□□ -1.09
VPS41-201ENST00000265745 TMEM5Q9Y2B1 443 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 FAM32AQ9Y421 112 aaKnown RBP8.25□□□□□ -1.09
VPS41-201ENST00000265745 TEX13CA0A0J9YWL9 993 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 TRBV4-1A0A0J9YWV2 114 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 PLPP2O43688 288 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 EIF4EBP3O60516 100 aaPredicted RBP8.24□□□□□ -1.09
VPS41-201ENST00000265745 SLC16A7O60669 478 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 NDUFB2O95178 105 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 MPZL1O95297 269 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 ABHD16AO95870 558 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 CD55P08174 381 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 ITGA2P17301 1181 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 TUBG1P23258 451 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 PRDX6P30041 224 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 SDHAP31040 664 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 FXYD6P3P58550 94 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 SCRN3Q0VDG4 424 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 CDK5R2Q13319 367 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 SEC23BQ15437 767 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 SPRNQ5BIV9 151 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 MTX3Q5HYI7 312 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 GPR139Q6DWJ6 353 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 GLYATQ6IB77 296 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 SPATC1Q76KD6 591 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 ZER1Q7Z7L7 766 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 GLB1L2Q8IW92 636 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 FAM86B1Q8N7N1 296 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 RAB1CQ92928 201 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 RASD2Q96D21 266 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 RAB39BQ96DA2 213 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 DHRS1Q96LJ7 313 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 ZNF570Q96NI8 536 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 DIRC2Q96SL1 478 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 GPX7Q96SL4 187 aaPredicted RBP8.24□□□□□ -1.09
VPS41-201ENST00000265745 GPA33Q99795 319 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 FUZQ9BT04 418 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 NDEL1Q9GZM8 345 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 EGLN1Q9GZT9 426 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 GORASP2Q9H8Y8 452 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 MSL2Q9HCI7 577 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 SPAG4Q9NPE6 437 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 G6PC2Q9NQR9 355 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 TUBG2Q9NRH3 451 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 VSX1Q9NZR4 365 aaPredicted RBP8.24□□□□□ -1.09
VPS41-201ENST00000265745 CGGBP1Q9UFW8 167 aaPredicted RBP8.24□□□□□ -1.09
VPS41-201ENST00000265745 IL20RAQ9UHF4 553 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 IER3IP1Q9Y5U9 82 aa8.24□□□□□ -1.09
VPS41-201ENST00000265745 NBEAL1Q6ZS30 2694 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 A0A0A6YYJ9 748 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 OR6C6A6NF89 314 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 IMPA2O14732 288 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 SGCEO43556 437 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 TIMM8AO60220 97 aaPredicted RBP8.23□□□□□ -1.09
VPS41-201ENST00000265745 KHDRBS3O75525 346 aaKnown RBP8.23□□□□□ -1.09
VPS41-201ENST00000265745 DIRAS1O95057 198 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 TXNDC12O95881 172 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 PNPP00491 289 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 IGHV2-5P01817 119 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 GSTM3P21266 225 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 CDKN2AP42771 156 aaKnown RBP8.23□□□□□ -1.09
VPS41-201ENST00000265745 HTR5AP47898 357 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 LSM6P62312 80 aaKnown RBP8.23□□□□□ -1.09
VPS41-201ENST00000265745 SLC3A1Q07837 685 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 AQP6Q13520 282 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 KRR1Q13601 381 aaKnown RBP8.23□□□□□ -1.09
VPS41-201ENST00000265745 KCNMB1Q16558 191 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 ZMAT1Q5H9K5 638 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 FGD3Q5JSP0 725 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 OTPQ5XKR4 325 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 DPY19L2P2Q6ZN68 376 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 PTCHD4Q6ZW05 846 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 OR52J3Q8NH60 311 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 HAVCR1Q96D42 359 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 WDR89Q96FK6 387 aaPredicted RBP8.23□□□□□ -1.09
VPS41-201ENST00000265745 RSRC1Q96IZ7 334 aaKnown RBP8.23□□□□□ -1.09
VPS41-201ENST00000265745 NUAK2Q9H093 628 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 SYT4Q9H2B2 425 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 POFUT1Q9H488 388 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 PLEK2Q9NYT0 353 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 ADA2Q9NZK5 511 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 ASH2LQ9UBL3 628 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 PURGQ9UJV8 347 aaKnown RBP8.23□□□□□ -1.09
VPS41-201ENST00000265745 SAMD4AQ9UPU9 718 aaKnown RBP8.23□□□□□ -1.09
VPS41-201ENST00000265745 COA3Q9Y2R0 106 aaPredicted RBP8.23□□□□□ -1.09
VPS41-201ENST00000265745 STARD10Q9Y365 291 aa8.23□□□□□ -1.09
VPS41-201ENST00000265745 LOC105371242A0A075B767 164 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 A0A0G2JMP0 313 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 A0A0X1KG70 313 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 UNC119BA6NIH7 251 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 SLC22A31A6NKX4 558 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 SOCS2O14508 198 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 RER1O15258 196 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 SNX3O60493 162 aa8.22□□□□□ -1.09
VPS41-201ENST00000265745 DOK2O60496 412 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms