RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Tgm1Q9JLF6 815 aa15.37■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 4930435E12RikA6X8Z9 381 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Tgfbr3O88393 850 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Tdpoz1P0DMR5 365 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Ccr8P56484 353 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Slc17a1Q61983 465 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Nudt9Q8BVU5 350 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Gm5039J3QNT6 144 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Ap1g1P22892 822 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Vmn1r81Q8R286 306 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Olfr979Q8VH10 311 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Ndufb7Q9CR61 137 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Lyrm7Q9DA03 104 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Gng12Q9DAS9 72 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Ms4a4aA0A087WRT7 236 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Cela3aA2A9U8 283 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Tnfrsf1aP25118 454 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 SpartQ8R1X6 671 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 MpiQ924M7 423 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Jam3Q9D8B7 310 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Chrm2Q9ERZ4 466 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Iglc4A0A0G2JEK5 104 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Vmn2r96E9PZU5 664 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 P06336 421 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Slc35b4Q8CIA5 331 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Bcl3Q9Z2F6 448 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Adamtsl1Q8BLI0 1745 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Cd93O89103 644 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Ifna7P06799 190 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Fbll1Q80WS3 314 aaKnown RBP15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Slco3a1Q8R3L5 710 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Igkv18-36A0A075B5M9 114 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 RradO88667 308 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 IghmP01872 454 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 DrgxQ8BYH0 263 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Atoh8Q99NA2 322 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Nprl2Q9WUE4 380 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 GzmmO08643 264 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 VaspP70460 375 aaKnown RBP15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Smad2Q62432 467 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 MffQ6PCP5 291 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Tdpoz5Q6YCH1 340 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Olfr168Q8VF05 312 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Wdr89Q9D0R9 386 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Isyna1Q9JHU9 557 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Trex2Q9R1A9 236 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Med12lQ8BQM9 2157 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Rp1P56716 2095 aa15.36■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Susd5G3UW60 619 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 P10404 641 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 GdnfP48540 211 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 N4bp2l1Q3V2Q8 238 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Ip6k1Q6PD10 433 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Olfr1384Q8VFA8 318 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Ca13Q9D6N1 262 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Atrnl1Q6A051 1378 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 ManeaQ6NXH2 462 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 D11Wsu47eQ6PIX9 558 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Acsm4Q80W40 580 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Zbtb42Q811H0 420 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Plpp7Q91WB2 271 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Trappc2Q9CQP2 140 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Snapc3Q9D2C9 407 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 OtofQ9ESF1 1997 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Lhx8O35652 367 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Zfand5O88878 213 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Rce1P57791 329 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Rps25P62852 125 aaKnown RBP15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Azgp1Q64726 307 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 RbksQ8R1Q9 323 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Vmn1r234Q8R298 329 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Gjc3Q921C1 269 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Cisd2Q9CQB5 135 aaKnown RBP15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 AtrxQ61687 2476 aaKnown RBP15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Stc2O88452 296 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Gdf3Q07104 366 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 BC051665E9Q623 330 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Lgals3P16110 264 aaKnown RBP15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Atf7ip2Q3UL97 452 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Olfr812Q8VG64 310 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Cxcr6Q9EQ16 351 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Tas2r103Q9JKA3 312 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 St6galnac5Q9QYJ1 336 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Zfp300A2AE21 645 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Olfr69E9Q7C5 316 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Prkar2aP12367 401 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Htr5aP30966 357 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Ypel5P62700 121 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Zik1Q80YP6 463 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Olfr860Q8VFF7 317 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Olfr889L7N1Y6 314 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Matn3O35701 481 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 SpibO35906 267 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Sp1O89090 784 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Wnt11P48615 354 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Gm773Q3TML4 206 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 ErasQ7TN89 227 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Olfr156Q8VGA9 318 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 TollipQ9QZ06 274 aa15.35■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Col2a1P28481 1487 aa15.35■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 58.2 ms