RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 SULT2B1O00204 365 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 ST8SIA3O43173 380 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 XRCC3O43542 346 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 CSTAP01040 98 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 SNRPBP14678 240 aaKnown RBP7.58□□□□□ -1.2
NECAP1-227ENST00000640648 ACHEP22303 614 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 EPHA2P29317 976 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 GRPRP30550 384 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 CLDN6P56747 220 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 ERVS71-1P61550 626 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 ZNF79Q15937 498 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 HSF5Q4G112 596 aaPredicted RBP7.58□□□□□ -1.2
NECAP1-227ENST00000640648 DEFB134Q4QY38 66 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 SYT14P1Q58G82 188 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 SLC18B1Q6NT16 456 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 UEVLDQ8IX04 471 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 CSNK1A1LQ8N752 337 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 ASB11Q8WXH4 323 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 OVCA2Q8WZ82 227 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 CDS1Q92903 461 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 NUDT11Q96G61 164 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 GPR78Q96P69 363 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 CIB3Q96Q77 187 aaPredicted RBP7.58□□□□□ -1.2
NECAP1-227ENST00000640648 NICN1Q9BSH3 213 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 SLC46A2Q9BY10 475 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 MTHFD2LQ9H903 347 aaPredicted RBP7.58□□□□□ -1.2
NECAP1-227ENST00000640648 FZD3Q9NPG1 666 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 CACFD1Q9UGQ2 172 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 PIAS3Q9Y6X2 628 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 TRPM3Q9HCF6 1732 aaPredicted RBP7.58□□□□□ -1.2
NECAP1-227ENST00000640648 MICAL3Q7RTP6 2002 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 ZNF727A8MUV8 499 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 J3KTA2 159 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 EMC8O43402 210 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 LILRB3O75022 631 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 SEMG1P04279 462 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 MSX1P28360 303 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 IL12BP29460 328 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 RAC1P63000 192 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 PMS2P11Q13670 270 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 FAM74A1Q5RGS3 127 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 PLBD1Q6P4A8 553 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 Q6ZN92 141 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 SLC35E3Q7Z769 313 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 LGI3Q8N145 548 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 GATSQ8NAP1 163 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 FOXJ1Q92949 421 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 NEIL2Q969S2 332 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 HIST1H2BAQ96A08 127 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 TSSK2Q96PF2 358 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 OR5B2Q96R09 309 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 DMRTA2Q96SC8 542 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 WNT5BQ9H1J7 359 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 A4GALTQ9NPC4 353 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 SPANXCQ9NY87 97 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 LRIT1Q9P2V4 623 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 NPTNQ9Y639 398 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 KCNMB2Q9Y691 235 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 ANKRD20A5PA0PJZ0 165 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 TK1P04183 234 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 SEC11BP0C7V7 166 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 CTSOP43234 321 aaPredicted RBP7.58□□□□□ -1.2
NECAP1-227ENST00000640648 ARRB1P49407 418 aaPredicted RBP7.58□□□□□ -1.2
NECAP1-227ENST00000640648 SYPL1Q16563 259 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 PDZD11Q5EBL8 140 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 BEX5Q5H9J7 111 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 C12orf73Q69YU5 71 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 CALHM3Q86XJ0 350 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 OR2L13Q8N349 312 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 OR5B3Q8NH48 314 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 EMG1Q92979 244 aaKnown RBP7.58□□□□□ -1.2
NECAP1-227ENST00000640648 SYNPO2LQ9H987 977 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 ZFP64Q9NPA5 681 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.58□□□□□ -1.2
NECAP1-227ENST00000640648 CREBZFQ9NS37 354 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 DDX60Q8IY21 1712 aaKnown RBP7.58□□□□□ -1.2
NECAP1-227ENST00000640648 EDDM13A0A1B0GTR0 161 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 AQP7O14520 342 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 STK17BO94768 372 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 HPNP05981 417 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 SRMP19623 302 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 CTHP32929 405 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 IRS1P35568 1242 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 AHRP35869 848 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 POU3F4P49335 361 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 CASP6P55212 293 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 BPIFB3P59826 476 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 CD300LDQ6UXZ3 194 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 ZNF100Q8IYN0 542 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 CMTM1Q8IZ96 169 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 C4orf36Q96KX1 117 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 GSX1Q9H4S2 264 aaPredicted RBP7.58□□□□□ -1.2
NECAP1-227ENST00000640648 SPHK2Q9NRA0 654 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 SLC39A9Q9NUM3 307 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 SPATA6Q9NWH7 488 aaPredicted RBP7.58□□□□□ -1.2
NECAP1-227ENST00000640648 OR14J1Q9UGF5 321 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 NAGKQ9UJ70 344 aa7.58□□□□□ -1.2
NECAP1-227ENST00000640648 ARID1AO14497 2285 aa7.57□□□□□ -1.2
NECAP1-227ENST00000640648 A0A087WWC5 75 aa7.57□□□□□ -1.2
NECAP1-227ENST00000640648 FIGNL2A6NMB9 653 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms