RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 HPNP05981 417 aa11.28□□□□□ -0.6
TNFAIP3-209ENST00000619035 ATF1P18846 271 aa11.28□□□□□ -0.6
TNFAIP3-209ENST00000619035 SOX2P48431 317 aa11.28□□□□□ -0.6
TNFAIP3-209ENST00000619035 AGFG1P52594 562 aaKnown RBP11.28□□□□□ -0.6
TNFAIP3-209ENST00000619035 SCN1BQ07699 218 aa11.28□□□□□ -0.6
TNFAIP3-209ENST00000619035 POU4F3Q15319 338 aa11.28□□□□□ -0.6
TNFAIP3-209ENST00000619035 ZNF766Q5HY98 468 aa11.28□□□□□ -0.6
TNFAIP3-209ENST00000619035 ZNF679Q8IYX0 411 aa11.28□□□□□ -0.6
TNFAIP3-209ENST00000619035 OR52N5Q8NH56 324 aa11.28□□□□□ -0.6
TNFAIP3-209ENST00000619035 ZNF845Q96IR2 970 aaPredicted RBP11.28□□□□□ -0.6
TNFAIP3-209ENST00000619035 MAP6Q96JE9 813 aa11.28□□□□□ -0.6
TNFAIP3-209ENST00000619035 EMC7Q9NPA0 242 aa11.28□□□□□ -0.6
TNFAIP3-209ENST00000619035 KLHL9Q9P2J3 617 aa11.28□□□□□ -0.6
TNFAIP3-209ENST00000619035 ZNF281Q9Y2X9 895 aa11.28□□□□□ -0.6
TNFAIP3-209ENST00000619035 DCDC2BA2VCK2 349 aa11.27□□□□□ -0.61
TNFAIP3-209ENST00000619035 GPRIN2O60269 458 aa11.27□□□□□ -0.61
TNFAIP3-209ENST00000619035 UCHL1P09936 223 aa11.27□□□□□ -0.61
TNFAIP3-209ENST00000619035 CSNK1A1P48729 337 aa11.27□□□□□ -0.61
TNFAIP3-209ENST00000619035 SELENOPP49908 381 aa11.27□□□□□ -0.61
TNFAIP3-209ENST00000619035 CLDN15P56746 228 aa11.27□□□□□ -0.61
TNFAIP3-209ENST00000619035 PPIAP62937 165 aaKnown RBP11.27□□□□□ -0.61
TNFAIP3-209ENST00000619035 MRPL28Q13084 256 aaKnown RBP11.27□□□□□ -0.61
TNFAIP3-209ENST00000619035 ZNF676Q8N7Q3 588 aa11.27□□□□□ -0.61
TNFAIP3-209ENST00000619035 ZNF454Q8N9F8 522 aa11.27□□□□□ -0.61
TNFAIP3-209ENST00000619035 IL17RDQ8NFM7 739 aa11.27□□□□□ -0.61
TNFAIP3-209ENST00000619035 OR10AC1Q8NH08 325 aa11.27□□□□□ -0.61
TNFAIP3-209ENST00000619035 PPP1R14AQ96A00 147 aa11.27□□□□□ -0.61
TNFAIP3-209ENST00000619035 ADGRG7Q96K78 797 aa11.27□□□□□ -0.61
TNFAIP3-209ENST00000619035 OR2M2Q96R28 347 aa11.27□□□□□ -0.61
TNFAIP3-209ENST00000619035 LRP12Q9Y561 859 aa11.27□□□□□ -0.61
TNFAIP3-209ENST00000619035 ITGB2P05107 769 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 NR2C1P13056 603 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 RIDAP52758 137 aaKnown RBP11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 TPTEP56180 551 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 HSD17B12Q53GQ0 312 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 LRFN4Q6PJG9 635 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 OR51A4Q8NGJ6 313 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 OR2G2Q8NGZ5 317 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 DERL3Q96Q80 235 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 GFI1Q99684 422 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 CENPMQ9NSP4 180 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 GLTPQ9NZD2 209 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 LOC400499M0QZD8 3231 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 HSPB2A8KAH6 182 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 LANCL1O43813 399 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 HRGP04196 525 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 CD1AP06126 327 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 CFL1P23528 166 aaKnown RBP11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 HSPB2Q16082 182 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 YIF1BQ5BJH7 314 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 RNASE12Q5GAN4 147 aaKnown RBP11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 PHYHD1Q5SRE7 291 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 PDSS1Q5T2R2 415 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 HES5Q5TA89 166 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 SLC25A47Q6Q0C1 308 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 IGFL2Q6UWQ7 119 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 PLXDC2Q6UX71 529 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 PAMR1Q6UXH9 720 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 UTS2BQ765I0 119 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 TPRA1Q86W33 373 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 PRSS35Q8N3Z0 413 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 ZNF433Q8N7K0 673 aaPredicted RBP11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 TMEM178AQ8NBL3 297 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 RPS4Y2Q8TD47 263 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 ACOT12Q8WYK0 555 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 SCMH1Q96GD3 660 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 SF3B5Q9BWJ5 86 aaKnown RBP11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 COMMD4Q9H0A8 199 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 FBXL3Q9UKT7 428 aa11.26□□□□□ -0.61
TNFAIP3-209ENST00000619035 ZNF879B4DU55 563 aa11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 DOK2O60496 412 aa11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 SLC19A2O60779 497 aa11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 ARL6IP5O75915 188 aa11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 AQP8O94778 261 aa11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 EPXP11678 715 aa11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 SRMP19623 302 aa11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 SPINK2P20155 84 aa11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 EIF2B2P49770 351 aaKnown RBP11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 LHX2P50458 406 aa11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 CLDN12P56749 244 aa11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 ROM1Q03395 351 aa11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 MFGE8Q08431 387 aaPredicted RBP11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 HIST3H3Q16695 136 aa11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 WDR38Q5JTN6 314 aa11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 TRIQKQ629K1 86 aa11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 UNQ9370/PRO34162Q6UXP9 181 aa11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 TRILQ7L0X0 811 aa11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 ZIC4Q8N9L1 334 aa11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 TEX19Q8NA77 164 aa11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 SETD6Q8TBK2 473 aa11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 ST7LQ8TDW4 575 aa11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 RNF128Q8TEB7 428 aa11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 CPNE4Q96A23 557 aaPredicted RBP11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 BRD7Q9NPI1 651 aa11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 KIAA1549Q9HCM3 1950 aa11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 TRAV1-2A0A0B4J238 106 aa11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 GFRA3O60609 400 aa11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 GATBO75879 557 aaKnown RBP11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 GLSO94925 669 aaPredicted RBP11.25□□□□□ -0.61
TNFAIP3-209ENST00000619035 PNPP00491 289 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms