RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 SLC25A43Q8WUT9 341 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC3-209ENST00000616395 RACGAP1Q9H0H5 632 aa15.22■□□□□ 0.03
TRAPPC3-209ENST00000616395 TAS2R16Q9NYV7 291 aa15.22■□□□□ 0.03
TRAPPC3-209ENST00000616395 IMPA2O14732 288 aa15.21■□□□□ 0.03
TRAPPC3-209ENST00000616395 ENTPD6O75354 484 aa15.21■□□□□ 0.03
TRAPPC3-209ENST00000616395 IGFBP1P08833 259 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC3-209ENST00000616395 MYL12AP19105 171 aa15.21■□□□□ 0.03
TRAPPC3-209ENST00000616395 ATP6V1E1P36543 226 aa15.21■□□□□ 0.03
TRAPPC3-209ENST00000616395 SERPINF1P36955 418 aa15.21■□□□□ 0.03
TRAPPC3-209ENST00000616395 CLK1P49759 484 aaKnown RBP15.21■□□□□ 0.03
TRAPPC3-209ENST00000616395 C1DQ13901 141 aaKnown RBP15.21■□□□□ 0.03
TRAPPC3-209ENST00000616395 NEDD8Q15843 81 aa15.21■□□□□ 0.03
TRAPPC3-209ENST00000616395 SYT14P1Q58G82 188 aa15.21■□□□□ 0.03
TRAPPC3-209ENST00000616395 NXNL2Q5VZ03 156 aa15.21■□□□□ 0.03
TRAPPC3-209ENST00000616395 SATL1Q86VE3 508 aa15.21■□□□□ 0.03
TRAPPC3-209ENST00000616395 CCDC103Q8IW40 242 aa15.21■□□□□ 0.03
TRAPPC3-209ENST00000616395 UBE2FQ969M7 185 aa15.21■□□□□ 0.03
TRAPPC3-209ENST00000616395 TMEM80Q96HE8 168 aa15.21■□□□□ 0.03
TRAPPC3-209ENST00000616395 ARL5BQ96KC2 179 aa15.21■□□□□ 0.03
TRAPPC3-209ENST00000616395 ZNF747Q9BV97 191 aa15.21■□□□□ 0.03
TRAPPC3-209ENST00000616395 CMC2Q9NRP2 79 aa15.21■□□□□ 0.03
TRAPPC3-209ENST00000616395 ASB6Q9NWX5 421 aa15.21■□□□□ 0.03
TRAPPC3-209ENST00000616395 ERVK-18Q9QC07 812 aa15.21■□□□□ 0.03
TRAPPC3-209ENST00000616395 CHRNA9Q9UGM1 479 aa15.21■□□□□ 0.03
TRAPPC3-209ENST00000616395 ERGIC3Q9Y282 383 aa15.21■□□□□ 0.03
TRAPPC3-209ENST00000616395 CORINQ9Y5Q5 1042 aa15.21■□□□□ 0.03
TRAPPC3-209ENST00000616395 TRAV27A0A087WT01 109 aa15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 TMEM72A0PK05 275 aa15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 ZNF99A8MXY4 864 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 PRKYO43930 277 aa15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 FADS2O95864 444 aaKnown RBP15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 DAOP14920 347 aa15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 ST3GAL4Q11206 333 aa15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 RAB40BQ12829 278 aa15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 SCGB2A2Q13296 93 aa15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 SMN1Q16637 294 aaKnown RBP15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 LCN1P1Q5VSP4 162 aa15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 C1orf140Q5VVS0 124 aa15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 OR7E24Q6IFN5 339 aa15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 SHISA2Q6UWI4 295 aa15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 TREML4Q6UXN2 200 aa15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 THSD4Q6ZMP0 1018 aa15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 ADGRG3Q86Y34 549 aa15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 ANKK1Q8NFD2 765 aa15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 OR8D4Q8NGM9 314 aa15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 GGHQ92820 318 aa15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 APH1AQ96BI3 265 aa15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 OTULINQ96BN8 352 aa15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 ERMAPQ96PL5 475 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 DNAJC27Q9NZQ0 273 aa15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 WARS2Q9UGM6 360 aaKnown RBP15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 HIF3AQ9Y2N7 669 aa15.2■□□□□ 0.02
TRAPPC3-209ENST00000616395 ZC3H12DA2A288 527 aaKnown RBP15.19■□□□□ 0.02
TRAPPC3-209ENST00000616395 SLC22A31A6NKX4 558 aa15.19■□□□□ 0.02
TRAPPC3-209ENST00000616395 BLOC1S5-TXNDC5H3BN57 136 aa15.19■□□□□ 0.02
TRAPPC3-209ENST00000616395 BHLHE40O14503 412 aa15.19■□□□□ 0.02
TRAPPC3-209ENST00000616395 ARPC3O15145 178 aa15.19■□□□□ 0.02
TRAPPC3-209ENST00000616395 RAB36O95755 333 aa15.19■□□□□ 0.02
TRAPPC3-209ENST00000616395 ITGA5P08648 1049 aa15.19■□□□□ 0.02
TRAPPC3-209ENST00000616395 DBTP11182 482 aaKnown RBP15.19■□□□□ 0.02
TRAPPC3-209ENST00000616395 RPS5P46782 204 aaKnown RBP15.19■□□□□ 0.02
TRAPPC3-209ENST00000616395 MTNR1AP48039 350 aa15.19■□□□□ 0.02
TRAPPC3-209ENST00000616395 DIO1P49895 249 aa15.19■□□□□ 0.02
TRAPPC3-209ENST00000616395 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.19■□□□□ 0.02
TRAPPC3-209ENST00000616395 TBCEQ15813 527 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC3-209ENST00000616395 ALG10Q5BKT4 473 aa15.19■□□□□ 0.02
TRAPPC3-209ENST00000616395 GPR139Q6DWJ6 353 aa15.19■□□□□ 0.02
TRAPPC3-209ENST00000616395 LAIR2Q6ISS4 152 aa15.19■□□□□ 0.02
TRAPPC3-209ENST00000616395 USP43Q70EL4 1123 aa15.19■□□□□ 0.02
TRAPPC3-209ENST00000616395 GLCCI1Q86VQ1 547 aa15.19■□□□□ 0.02
TRAPPC3-209ENST00000616395 JAZF1Q86VZ6 243 aa15.19■□□□□ 0.02
TRAPPC3-209ENST00000616395 OR4Q3Q8NH05 313 aa15.19■□□□□ 0.02
TRAPPC3-209ENST00000616395 ZNF420Q8TAQ5 688 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC3-209ENST00000616395 MRPL48Q96GC5 212 aaKnown RBP15.19■□□□□ 0.02
TRAPPC3-209ENST00000616395 ZNF582Q96NG8 517 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC3-209ENST00000616395 MALT1Q9UDY8 824 aa15.19■□□□□ 0.02
TRAPPC3-209ENST00000616395 NOSIPQ9Y314 301 aaKnown RBP15.19■□□□□ 0.02
TRAPPC3-209ENST00000616395 IGKV1D-42A0A075B6H8 117 aa15.18■□□□□ 0.02
TRAPPC3-209ENST00000616395 B4DSR2 109 aa15.18■□□□□ 0.02
TRAPPC3-209ENST00000616395 ZNF701M0R085 212 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC3-209ENST00000616395 TRMUO75648 421 aaKnown RBP15.18■□□□□ 0.02
TRAPPC3-209ENST00000616395 PPP1R3DO95685 299 aa15.18■□□□□ 0.02
TRAPPC3-209ENST00000616395 DCKP27707 260 aa15.18■□□□□ 0.02
TRAPPC3-209ENST00000616395 HTR1FP30939 366 aa15.18■□□□□ 0.02
TRAPPC3-209ENST00000616395 NTF4P34130 210 aa15.18■□□□□ 0.02
TRAPPC3-209ENST00000616395 IDH3GP51553 393 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC3-209ENST00000616395 ZNF91Q05481 1191 aa15.18■□□□□ 0.02
TRAPPC3-209ENST00000616395 POU4F2Q12837 409 aa15.18■□□□□ 0.02
TRAPPC3-209ENST00000616395 C9orf135Q5VTT2 229 aa15.18■□□□□ 0.02
TRAPPC3-209ENST00000616395 OR5J2Q8NH18 312 aa15.18■□□□□ 0.02
TRAPPC3-209ENST00000616395 MFSD8Q8NHS3 518 aa15.18■□□□□ 0.02
TRAPPC3-209ENST00000616395 SLC25A36Q96CQ1 311 aa15.18■□□□□ 0.02
TRAPPC3-209ENST00000616395 GPX7Q96SL4 187 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC3-209ENST00000616395 SLC17A5Q9NRA2 495 aa15.18■□□□□ 0.02
TRAPPC3-209ENST00000616395 FKBP14Q9NWM8 211 aa15.18■□□□□ 0.02
TRAPPC3-209ENST00000616395 EMC3Q9P0I2 261 aa15.18■□□□□ 0.02
TRAPPC3-209ENST00000616395 GRHPRQ9UBQ7 328 aa15.18■□□□□ 0.02
TRAPPC3-209ENST00000616395 RSL24D1Q9UHA3 163 aaKnown RBP15.18■□□□□ 0.02
TRAPPC3-209ENST00000616395 EXOSC1Q9Y3B2 195 aaKnown RBP15.18■□□□□ 0.02
TRAPPC3-209ENST00000616395 SPEF1Q9Y4P9 236 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms