RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 MRI1Q9BV20 369 aa9.41□□□□□ -0.9
LINC01001-203ENST00000607448 DPAGT1Q9H3H5 408 aa9.41□□□□□ -0.9
LINC01001-203ENST00000607448 CHST11Q9NPF2 352 aa9.41□□□□□ -0.9
LINC01001-203ENST00000607448 RYDENQ9NUL5 291 aaKnown RBP9.41□□□□□ -0.9
LINC01001-203ENST00000607448 PAQR5Q9NXK6 330 aaPredicted RBP9.41□□□□□ -0.9
LINC01001-203ENST00000607448 WIF1Q9Y5W5 379 aa9.41□□□□□ -0.9
LINC01001-203ENST00000607448 NUBP2Q9Y5Y2 271 aa9.41□□□□□ -0.9
LINC01001-203ENST00000607448 HRNRQ86YZ3 2850 aaPredicted RBP9.4□□□□□ -0.9
LINC01001-203ENST00000607448 DVL2O14641 736 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 IMPA2O14732 288 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 GSTZ1O43708 216 aaPredicted RBP9.4□□□□□ -0.9
LINC01001-203ENST00000607448 WDR1O75083 606 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 CSTAP01040 98 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 NGFRP08138 427 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 CLUP10909 449 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 COX6B1P14854 86 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 HIST1H1CP16403 213 aaKnown RBP9.4□□□□□ -0.9
LINC01001-203ENST00000607448 IL12BP29460 328 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 CHRNB4P30926 498 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 RPL4P36578 427 aaKnown RBP9.4□□□□□ -0.9
LINC01001-203ENST00000607448 ACVR1BP36896 505 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 MMP15P51511 669 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 PNLIPRP2P54317 469 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 RAG2P55895 527 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 RPS4XP62701 263 aaKnown RBP9.4□□□□□ -0.9
LINC01001-203ENST00000607448 RIPPLY1Q0D2K3 151 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 SNTA1Q13424 505 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 EFR3AQ14156 821 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 UNQ9370/PRO34162Q6UXP9 181 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 YIPF7Q8N8F6 280 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 ACBD4Q8NC06 268 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 SDR9C7Q8NEX9 313 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 RPS4Y2Q8TD47 263 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 SNX33Q8WV41 574 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 LIPHQ8WWY8 451 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 FYTTD1Q96QD9 318 aaKnown RBP9.4□□□□□ -0.9
LINC01001-203ENST00000607448 DDOQ99489 341 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 NMNAT2Q9BZQ4 307 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 PRDM14Q9GZV8 571 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 PPIL3Q9H2H8 161 aaKnown RBP9.4□□□□□ -0.9
LINC01001-203ENST00000607448 MARCH7Q9H992 704 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 NRIP3Q9NQ35 241 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 EXOSC3Q9NQT5 275 aaKnown RBP9.4□□□□□ -0.9
LINC01001-203ENST00000607448 PTTG3PQ9NZH4 202 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 MOKQ9UQ07 419 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 CAMK2AQ9UQM7 478 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 OR10H1Q9Y4A9 318 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 IER3IP1Q9Y5U9 82 aa9.4□□□□□ -0.9
LINC01001-203ENST00000607448 C7orf66A4D0T2 115 aa9.39□□□□□ -0.91
LINC01001-203ENST00000607448 LRRN3E7EW58 273 aa9.39□□□□□ -0.91
LINC01001-203ENST00000607448 GLCEO94923 617 aa9.39□□□□□ -0.91
LINC01001-203ENST00000607448 TFP02787 698 aa9.39□□□□□ -0.91
LINC01001-203ENST00000607448 EPXP11678 715 aa9.39□□□□□ -0.91
LINC01001-203ENST00000607448 LCN1P31025 176 aa9.39□□□□□ -0.91
LINC01001-203ENST00000607448 EVI2BP34910 448 aa9.39□□□□□ -0.91
LINC01001-203ENST00000607448 SLC25A1P53007 311 aa9.39□□□□□ -0.91
LINC01001-203ENST00000607448 OR10A3P58181 314 aa9.39□□□□□ -0.91
LINC01001-203ENST00000607448 MADCAM1Q13477 382 aa9.39□□□□□ -0.91
LINC01001-203ENST00000607448 ACSF3Q4G176 576 aaPredicted RBP9.39□□□□□ -0.91
LINC01001-203ENST00000607448 TP53I3Q53FA7 332 aa9.39□□□□□ -0.91
LINC01001-203ENST00000607448 WBP2NLQ6ICG8 309 aa9.39□□□□□ -0.91
LINC01001-203ENST00000607448 KCTD20Q7Z5Y7 419 aa9.39□□□□□ -0.91
LINC01001-203ENST00000607448 ZNF527Q8NB42 609 aa9.39□□□□□ -0.91
LINC01001-203ENST00000607448 NPEPL1Q8NDH3 523 aa9.39□□□□□ -0.91
LINC01001-203ENST00000607448 FAM71CQ8NEG0 241 aa9.39□□□□□ -0.91
LINC01001-203ENST00000607448 OR4K13Q8NH42 304 aa9.39□□□□□ -0.91
LINC01001-203ENST00000607448 ZMYND19Q96E35 227 aaPredicted RBP9.39□□□□□ -0.91
LINC01001-203ENST00000607448 PELI1Q96FA3 418 aa9.39□□□□□ -0.91
LINC01001-203ENST00000607448 WDYHV1Q96HA8 205 aa9.39□□□□□ -0.91
LINC01001-203ENST00000607448 ABCG5Q9H222 651 aa9.39□□□□□ -0.91
LINC01001-203ENST00000607448 ACOXLQ9NUZ1 547 aa9.39□□□□□ -0.91
LINC01001-203ENST00000607448 SPATA2Q9UM82 520 aa9.39□□□□□ -0.91
LINC01001-203ENST00000607448 OTOGQ6ZRI0 2925 aa9.39□□□□□ -0.91
LINC01001-203ENST00000607448 ARPC4-TTLL3A0A0A6YYG9 625 aa9.38□□□□□ -0.91
LINC01001-203ENST00000607448 TRBV2A0A0J9YWF9 115 aa9.38□□□□□ -0.91
LINC01001-203ENST00000607448 A0A1W2PRG6 482 aa9.38□□□□□ -0.91
LINC01001-203ENST00000607448 MCIDASD6RGH6 385 aa9.38□□□□□ -0.91
LINC01001-203ENST00000607448 EEF1E1O43324 174 aaKnown RBP9.38□□□□□ -0.91
LINC01001-203ENST00000607448 FADS1O60427 444 aa9.38□□□□□ -0.91
LINC01001-203ENST00000607448 ADAM11O75078 769 aa9.38□□□□□ -0.91
LINC01001-203ENST00000607448 CBR3O75828 277 aa9.38□□□□□ -0.91
LINC01001-203ENST00000607448 GYPBP06028 91 aa9.38□□□□□ -0.91
LINC01001-203ENST00000607448 TACSTD2P09758 323 aa9.38□□□□□ -0.91
LINC01001-203ENST00000607448 SPI1P17947 270 aa9.38□□□□□ -0.91
LINC01001-203ENST00000607448 IGFBP2P18065 325 aa9.38□□□□□ -0.91
LINC01001-203ENST00000607448 EDNRAP25101 427 aa9.38□□□□□ -0.91
LINC01001-203ENST00000607448 STARP49675 285 aa9.38□□□□□ -0.91
LINC01001-203ENST00000607448 GFRA1P56159 465 aa9.38□□□□□ -0.91
LINC01001-203ENST00000607448 KRTAP10-9P60411 292 aa9.38□□□□□ -0.91
LINC01001-203ENST00000607448 DYRK1AQ13627 763 aa9.38□□□□□ -0.91
LINC01001-203ENST00000607448 SNTB1Q13884 538 aaKnown RBP9.38□□□□□ -0.91
LINC01001-203ENST00000607448 KLHL26Q53HC5 615 aa9.38□□□□□ -0.91
LINC01001-203ENST00000607448 UBE2NLQ5JXB2 153 aa9.38□□□□□ -0.91
LINC01001-203ENST00000607448 POMZP3Q6PJE2 187 aa9.38□□□□□ -0.91
LINC01001-203ENST00000607448 APOOLQ6UXV4 268 aa9.38□□□□□ -0.91
LINC01001-203ENST00000607448 SSX6Q7RTT6 188 aa9.38□□□□□ -0.91
LINC01001-203ENST00000607448 RELL2Q8NC24 303 aaPredicted RBP9.38□□□□□ -0.91
LINC01001-203ENST00000607448 OR14L1PQ8NHC6 308 aa9.38□□□□□ -0.91
LINC01001-203ENST00000607448 ASB5Q8WWX0 329 aa9.38□□□□□ -0.91
LINC01001-203ENST00000607448 C3orf49Q96BT1 292 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms