RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 PLEKHB1Q9UF11 243 aaPredicted RBP19.06■□□□□ 0.64
USP6NL-204ENST00000606752 CAMK2AQ9UQM7 478 aa19.06■□□□□ 0.64
USP6NL-204ENST00000606752 IQCMA0A1B0GVH7 501 aa19.05■□□□□ 0.64
USP6NL-204ENST00000606752 CLDN25C9JDP6 229 aa19.05■□□□□ 0.64
USP6NL-204ENST00000606752 ARL6IP5O75915 188 aa19.05■□□□□ 0.64
USP6NL-204ENST00000606752 UCHL1P09936 223 aa19.05■□□□□ 0.64
USP6NL-204ENST00000606752 S100A5P33763 92 aa19.05■□□□□ 0.64
USP6NL-204ENST00000606752 MRPS34P82930 218 aaKnown RBP19.05■□□□□ 0.64
USP6NL-204ENST00000606752 PLXDC2Q6UX71 529 aa19.05■□□□□ 0.64
USP6NL-204ENST00000606752 CFAP77Q6ZQR2 320 aa19.05■□□□□ 0.64
USP6NL-204ENST00000606752 TUSC5Q8IXB3 177 aa19.05■□□□□ 0.64
USP6NL-204ENST00000606752 ZNF676Q8N7Q3 588 aa19.05■□□□□ 0.64
USP6NL-204ENST00000606752 OR10S1Q8NGN2 331 aa19.05■□□□□ 0.64
USP6NL-204ENST00000606752 CPT1CQ8TCG5 803 aa19.05■□□□□ 0.64
USP6NL-204ENST00000606752 NABP1Q96AH0 204 aa19.05■□□□□ 0.64
USP6NL-204ENST00000606752 OR14A2Q96R54 314 aa19.05■□□□□ 0.64
USP6NL-204ENST00000606752 ZNF416Q9BWM5 594 aa19.05■□□□□ 0.64
USP6NL-204ENST00000606752 CRLF2Q9HC73 371 aa19.05■□□□□ 0.64
USP6NL-204ENST00000606752 HMG20AQ9NP66 347 aa19.05■□□□□ 0.64
USP6NL-204ENST00000606752 AKIP1Q9NQ31 210 aa19.05■□□□□ 0.64
USP6NL-204ENST00000606752 R4GMQ9 66 aa19.05■□□□□ 0.64
USP6NL-204ENST00000606752 A0A087WV48 116 aa19.04■□□□□ 0.64
USP6NL-204ENST00000606752 ZNF879B4DU55 563 aa19.04■□□□□ 0.64
USP6NL-204ENST00000606752 MKRN2OSH3BPM6 223 aa19.04■□□□□ 0.64
USP6NL-204ENST00000606752 RRP8O43159 456 aaKnown RBP19.04■□□□□ 0.64
USP6NL-204ENST00000606752 SRSF10O75494 262 aaKnown RBP19.04■□□□□ 0.64
USP6NL-204ENST00000606752 PDGFAP04085 211 aa19.04■□□□□ 0.64
USP6NL-204ENST00000606752 DCTDP32321 178 aa19.04■□□□□ 0.64
USP6NL-204ENST00000606752 KIR3DL2P43630 455 aa19.04■□□□□ 0.64
USP6NL-204ENST00000606752 DCTN2Q13561 401 aaKnown RBP19.04■□□□□ 0.64
USP6NL-204ENST00000606752 ZNF837Q96EG3 531 aaPredicted RBP19.04■□□□□ 0.64
USP6NL-204ENST00000606752 FBXL3Q9UKT7 428 aa19.04■□□□□ 0.64
USP6NL-204ENST00000606752 URB1O60287 2271 aaKnown RBP19.04■□□□□ 0.64
USP6NL-204ENST00000606752 PHF3Q92576 2039 aaKnown RBP19.04■□□□□ 0.64
USP6NL-204ENST00000606752 ACACAQ13085 2346 aa19.04■□□□□ 0.64
USP6NL-204ENST00000606752 TRAV1-2A0A0B4J238 106 aa19.04■□□□□ 0.64
USP6NL-204ENST00000606752 SMIM30A4D0T7 59 aa19.04■□□□□ 0.64
USP6NL-204ENST00000606752 YES1P07947 543 aa19.04■□□□□ 0.64
USP6NL-204ENST00000606752 NPR2P20594 1047 aa19.04■□□□□ 0.64
USP6NL-204ENST00000606752 CAV3P56539 151 aa19.04■□□□□ 0.64
USP6NL-204ENST00000606752 CATSPERDQ86XM0 798 aa19.04■□□□□ 0.64
USP6NL-204ENST00000606752 WDR12Q9GZL7 423 aaKnown RBP19.04■□□□□ 0.64
USP6NL-204ENST00000606752 PRDM14Q9GZV8 571 aa19.04■□□□□ 0.64
USP6NL-204ENST00000606752 A0A1W2PPK0 400 aa19.03■□□□□ 0.64
USP6NL-204ENST00000606752 ZNF878C9JN71 531 aa19.03■□□□□ 0.64
USP6NL-204ENST00000606752 K7ENP7 123 aa19.03■□□□□ 0.64
USP6NL-204ENST00000606752 AQP7O14520 342 aa19.03■□□□□ 0.64
USP6NL-204ENST00000606752 CTDSP2O14595 271 aa19.03■□□□□ 0.64
USP6NL-204ENST00000606752 MFGE8Q08431 387 aaPredicted RBP19.03■□□□□ 0.64
USP6NL-204ENST00000606752 ENDOGQ14249 297 aaKnown RBP19.03■□□□□ 0.64
USP6NL-204ENST00000606752 ZNF846Q147U1 533 aa19.03■□□□□ 0.64
USP6NL-204ENST00000606752 Q499Y3 187 aa19.03■□□□□ 0.64
USP6NL-204ENST00000606752 FAM27BQ5VT28 67 aa19.03■□□□□ 0.64
USP6NL-204ENST00000606752 INO80CQ6PI98 192 aaPredicted RBP19.03■□□□□ 0.64
USP6NL-204ENST00000606752 MCEMP1Q8IX19 187 aa19.03■□□□□ 0.64
USP6NL-204ENST00000606752 IL17RDQ8NFM7 739 aa19.03■□□□□ 0.64
USP6NL-204ENST00000606752 AP3S1Q92572 193 aa19.03■□□□□ 0.64
USP6NL-204ENST00000606752 TAAR6Q96RI8 345 aa19.03■□□□□ 0.64
USP6NL-204ENST00000606752 LINC00470Q9BZP3 86 aa19.03■□□□□ 0.64
USP6NL-204ENST00000606752 SMURF1Q9HCE7 757 aa19.03■□□□□ 0.64
USP6NL-204ENST00000606752 GTF2A1LQ9UNN4 478 aa19.03■□□□□ 0.64
USP6NL-204ENST00000606752 SLC22A13Q9Y226 551 aa19.03■□□□□ 0.64
USP6NL-204ENST00000606752 EMC9Q9Y3B6 208 aa19.03■□□□□ 0.64
USP6NL-204ENST00000606752 ZNF175Q9Y473 711 aa19.03■□□□□ 0.64
USP6NL-204ENST00000606752 TRBV5-5A0A0J9YX44 114 aa19.02■□□□□ 0.64
USP6NL-204ENST00000606752 TMEM269A0A1B0GVZ9 245 aa19.02■□□□□ 0.64
USP6NL-204ENST00000606752 RER1O15258 196 aa19.02■□□□□ 0.64
USP6NL-204ENST00000606752 BMP4P12644 408 aa19.02■□□□□ 0.64
USP6NL-204ENST00000606752 MMP16P51512 607 aa19.02■□□□□ 0.64
USP6NL-204ENST00000606752 INAQ16352 499 aa19.02■□□□□ 0.64
USP6NL-204ENST00000606752 KLHL24Q6TFL4 600 aa19.02■□□□□ 0.64
USP6NL-204ENST00000606752 SIAH3Q8IW03 269 aa19.02■□□□□ 0.64
USP6NL-204ENST00000606752 RDH10Q8IZV5 341 aa19.02■□□□□ 0.64
USP6NL-204ENST00000606752 GPR148Q8TDV2 347 aa19.02■□□□□ 0.64
USP6NL-204ENST00000606752 BORCS5Q969J3 196 aa19.02■□□□□ 0.64
USP6NL-204ENST00000606752 DERL3Q96Q80 235 aa19.02■□□□□ 0.64
USP6NL-204ENST00000606752 ALKBH3Q96Q83 286 aaPredicted RBP19.02■□□□□ 0.64
USP6NL-204ENST00000606752 SLCO5A1Q9H2Y9 848 aa19.02■□□□□ 0.64
USP6NL-204ENST00000606752 CALHM2Q9HA72 323 aa19.02■□□□□ 0.64
USP6NL-204ENST00000606752 GPR35Q9HC97 309 aa19.02■□□□□ 0.64
USP6NL-204ENST00000606752 NOX4Q9NPH5 578 aa19.02■□□□□ 0.64
USP6NL-204ENST00000606752 PLSCR2Q9NRY7 297 aa19.02■□□□□ 0.64
USP6NL-204ENST00000606752 OR6C65A6NJZ3 312 aa19.02■□□□□ 0.63
USP6NL-204ENST00000606752 LOC110117498-PIK3R3F6TDL0 507 aa19.02■□□□□ 0.63
USP6NL-204ENST00000606752 NCR1O76036 304 aa19.02■□□□□ 0.63
USP6NL-204ENST00000606752 OCM2P0CE71 109 aa19.02■□□□□ 0.63
USP6NL-204ENST00000606752 MAPK3P27361 379 aaPredicted RBP19.02■□□□□ 0.63
USP6NL-204ENST00000606752 HSD17B12Q53GQ0 312 aa19.02■□□□□ 0.63
USP6NL-204ENST00000606752 LINGO2Q7L985 606 aa19.02■□□□□ 0.63
USP6NL-204ENST00000606752 MFSD4AQ8N468 514 aa19.02■□□□□ 0.63
USP6NL-204ENST00000606752 RBMXL3Q8N7X1 1067 aaKnown RBP19.02■□□□□ 0.63
USP6NL-204ENST00000606752 GJC3Q8NFK1 279 aa19.02■□□□□ 0.63
USP6NL-204ENST00000606752 PPP1R14AQ96A00 147 aa19.02■□□□□ 0.63
USP6NL-204ENST00000606752 NIPAL2Q9H841 368 aa19.02■□□□□ 0.63
USP6NL-204ENST00000606752 PNRC2Q9NPJ4 139 aaKnown RBP19.02■□□□□ 0.63
USP6NL-204ENST00000606752 TMEM38BQ9NVV0 291 aa19.02■□□□□ 0.63
USP6NL-204ENST00000606752 TNRC6AQ8NDV7 1962 aaKnown RBP19.01■□□□□ 0.63
USP6NL-204ENST00000606752 ARPC4-TTLL3A0A0A6YYG9 625 aa19.01■□□□□ 0.63
USP6NL-204ENST00000606752 SLC22A20A6NK97 555 aa19.01■□□□□ 0.63
USP6NL-204ENST00000606752 K7EM74 188 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms